RNA–Protein interactions for RNA: ENST00000322147.8

LTBP3-202, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBP3, Length 4,046 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-202ENST00000322147 TEX35Q5T0J7 233 aa21.29■■□□□ 1
LTBP3-202ENST00000322147 DHX32Q7L7V1 743 aaKnown RBP21.29■■□□□ 1
LTBP3-202ENST00000322147 ROBO2Q9HCK4 1378 aa21.29■■□□□ 1
LTBP3-202ENST00000322147 A0A087WWV3 80 aa21.29■■□□□ 1
LTBP3-202ENST00000322147 SMTNL1A8MU46 457 aa21.29■■□□□ 1
LTBP3-202ENST00000322147 RIOK3O14730 519 aaKnown RBP21.29■■□□□ 1
LTBP3-202ENST00000322147 SKILP12757 684 aa21.29■■□□□ 1
LTBP3-202ENST00000322147 SMARCE1Q969G3 411 aa21.29■■□□□ 1
LTBP3-202ENST00000322147 CGNQ9P2M7 1197 aaKnown RBP21.29■■□□□ 1
LTBP3-202ENST00000322147 RAD50Q92878 1312 aa21.29■■□□□ 1
LTBP3-202ENST00000322147 TMEM2Q9UHN6 1383 aa21.28■■□□□ 1
LTBP3-202ENST00000322147 B4E1Z4 1266 aa21.28■■□□□ 1
LTBP3-202ENST00000322147 STX17P56962 302 aa21.28■■□□□ 1
LTBP3-202ENST00000322147 INTS4Q96HW7 963 aaKnown RBP21.28■■□□□ 1
LTBP3-202ENST00000322147 MAGEB6Q8N7X4 407 aa21.28■■□□□ 1
LTBP3-202ENST00000322147 ZFYVE27Q5T4F4 411 aa21.28■■□□□ 1
LTBP3-202ENST00000322147 METTL22Q9BUU2 404 aaPredicted RBP21.28■■□□□ 1
LTBP3-202ENST00000322147 STX1AQ16623 288 aa21.27■■□□□ 1
LTBP3-202ENST00000322147 KIF18AQ8NI77 898 aa21.27■■□□□ 1
LTBP3-202ENST00000322147 IDEP14735 1019 aa21.27■■□□□ 1
LTBP3-202ENST00000322147 SSH3Q8TE77 659 aa21.27■■□□□ 1
LTBP3-202ENST00000322147 SHPRHQ149N8 1683 aa21.27■■□□□ 1
LTBP3-202ENST00000322147 KIF20AO95235 890 aa21.27■■□□□ 1
LTBP3-202ENST00000322147 ZNF652Q9Y2D9 606 aa21.27■■□□□ 1
LTBP3-202ENST00000322147 SETD1BQ9UPS6 1966 aaKnown RBP21.27■□□□□ 0.99
LTBP3-202ENST00000322147 DHX37Q8IY37 1157 aaKnown RBP21.26■□□□□ 0.99
LTBP3-202ENST00000322147 RNF113AO15541 343 aaKnown RBP21.26■□□□□ 0.99
LTBP3-202ENST00000322147 EPB41L2O43491 1005 aaKnown RBP21.26■□□□□ 0.99
LTBP3-202ENST00000322147 WTAPQ15007 396 aa21.26■□□□□ 0.99
LTBP3-202ENST00000322147 ZNF444Q8N0Y2 327 aaPredicted RBP21.26■□□□□ 0.99
LTBP3-202ENST00000322147 ZNF710Q8N1W2 664 aa21.26■□□□□ 0.99
LTBP3-202ENST00000322147 PLIN2Q99541 437 aa21.26■□□□□ 0.99
LTBP3-202ENST00000322147 MYOM2P54296 1465 aa21.26■□□□□ 0.99
LTBP3-202ENST00000322147 POLR3GO15318 223 aaPredicted RBP21.26■□□□□ 0.99
LTBP3-202ENST00000322147 HSPA4P34932 840 aa21.26■□□□□ 0.99
LTBP3-202ENST00000322147 BBXQ8WY36 941 aaPredicted RBP21.26■□□□□ 0.99
LTBP3-202ENST00000322147 CCDC196A0A1B0GTZ2 297 aa21.26■□□□□ 0.99
LTBP3-202ENST00000322147 SLFNL1Q499Z3 407 aa21.26■□□□□ 0.99
LTBP3-202ENST00000322147 BEND3Q5T5X7 828 aa21.26■□□□□ 0.99
LTBP3-202ENST00000322147 WASF1Q92558 559 aa21.26■□□□□ 0.99
LTBP3-202ENST00000322147 AXDND1Q5T1B0 1012 aaPredicted RBP21.25■□□□□ 0.99
LTBP3-202ENST00000322147 MRPS27Q92552 414 aaKnown RBP21.25■□□□□ 0.99
LTBP3-202ENST00000322147 PHKBQ93100 1093 aa21.25■□□□□ 0.99
LTBP3-202ENST00000322147 ZNHIT6Q9NWK9 470 aaKnown RBP21.25■□□□□ 0.99
LTBP3-202ENST00000322147 ABCA6Q8N139 1617 aa21.25■□□□□ 0.99
LTBP3-202ENST00000322147 MAP3K4Q9Y6R4 1608 aa21.25■□□□□ 0.99
LTBP3-202ENST00000322147 CCDC102BQ68D86 513 aa21.25■□□□□ 0.99
LTBP3-202ENST00000322147 SLC52A2Q9HAB3 445 aa21.25■□□□□ 0.99
LTBP3-202ENST00000322147 CATIPQ7Z7H3 387 aa21.25■□□□□ 0.99
LTBP3-202ENST00000322147 ZSCAN16Q9H4T2 348 aaPredicted RBP21.25■□□□□ 0.99
LTBP3-202ENST00000322147 EYA2O00167 538 aa21.24■□□□□ 0.99
LTBP3-202ENST00000322147 SPTLC2O15270 562 aa21.24■□□□□ 0.99
LTBP3-202ENST00000322147 RPS6KB1P23443 525 aa21.24■□□□□ 0.99
LTBP3-202ENST00000322147 NBPF5PQ86XG9 351 aaPredicted RBP21.24■□□□□ 0.99
LTBP3-202ENST00000322147 CBFA2T2O43439 604 aa21.24■□□□□ 0.99
LTBP3-202ENST00000322147 RUFY1Q96T51 708 aa21.24■□□□□ 0.99
LTBP3-202ENST00000322147 STIM1Q13586 685 aa21.23■□□□□ 0.99
LTBP3-202ENST00000322147 KIF4BQ2VIQ3 1234 aa21.23■□□□□ 0.99
LTBP3-202ENST00000322147 LRRC24Q50LG9 513 aa21.23■□□□□ 0.99
LTBP3-202ENST00000322147 CCDC194A0A1B0GVG4 234 aa21.23■□□□□ 0.99
LTBP3-202ENST00000322147 NEURL1BA8MQ27 555 aa21.23■□□□□ 0.99
LTBP3-202ENST00000322147 ZNF853P0CG23 659 aa21.23■□□□□ 0.99
LTBP3-202ENST00000322147 CMTR1Q8N1G2 835 aaKnown RBP21.23■□□□□ 0.99
LTBP3-202ENST00000322147 CENPHQ9H3R5 247 aa21.23■□□□□ 0.99
LTBP3-202ENST00000322147 DACH1Q9UI36 760 aa21.23■□□□□ 0.99
LTBP3-202ENST00000322147 ITGA6P23229 1130 aa21.22■□□□□ 0.99
LTBP3-202ENST00000322147 ZAP70P43403 619 aa21.22■□□□□ 0.99
LTBP3-202ENST00000322147 TPCN1Q9ULQ1 816 aa21.22■□□□□ 0.99
LTBP3-202ENST00000322147 MBD4O95243 580 aa21.22■□□□□ 0.99
LTBP3-202ENST00000322147 LIG1P18858 919 aa21.22■□□□□ 0.99
LTBP3-202ENST00000322147 UBASH3AP57075 661 aa21.22■□□□□ 0.99
LTBP3-202ENST00000322147 CT47A1Q5JQC4 288 aaPredicted RBP21.22■□□□□ 0.99
LTBP3-202ENST00000322147 GPIHBP1Q8IV16 184 aa21.22■□□□□ 0.99
LTBP3-202ENST00000322147 XAGE2Q96GT9 111 aa21.22■□□□□ 0.99
LTBP3-202ENST00000322147 UBA5Q9GZZ9 404 aa21.22■□□□□ 0.99
LTBP3-202ENST00000322147 UIMC1Q96RL1 719 aa21.21■□□□□ 0.99
LTBP3-202ENST00000322147 PYCARDQ9ULZ3 195 aa21.21■□□□□ 0.99
LTBP3-202ENST00000322147 CHD1O14646 1710 aa21.21■□□□□ 0.99
LTBP3-202ENST00000322147 CTAGE5O15320 804 aa21.21■□□□□ 0.99
LTBP3-202ENST00000322147 DHX58Q96C10 678 aa21.21■□□□□ 0.99
LTBP3-202ENST00000322147 DDB1Q16531 1140 aa21.21■□□□□ 0.99
LTBP3-202ENST00000322147 RTN1Q16799 776 aa21.21■□□□□ 0.99
LTBP3-202ENST00000322147 C8orf37Q96NL8 207 aa21.21■□□□□ 0.99
LTBP3-202ENST00000322147 CDC5LQ99459 802 aaKnown RBP21.21■□□□□ 0.99
LTBP3-202ENST00000322147 PUS3Q9BZE2 481 aaKnown RBP21.21■□□□□ 0.99
LTBP3-202ENST00000322147 PDIA4P13667 645 aaKnown RBP21.2■□□□□ 0.99
LTBP3-202ENST00000322147 KCNQ4P56696 695 aa21.2■□□□□ 0.99
LTBP3-202ENST00000322147 IFNKQ9P0W0 207 aa21.2■□□□□ 0.99
LTBP3-202ENST00000322147 CCDC96Q2M329 555 aa21.2■□□□□ 0.98
LTBP3-202ENST00000322147 PTCH1Q13635 1447 aa21.2■□□□□ 0.98
LTBP3-202ENST00000322147 GNG11P61952 73 aa21.2■□□□□ 0.98
LTBP3-202ENST00000322147 ARMT1Q9H993 441 aa21.2■□□□□ 0.98
LTBP3-202ENST00000322147 DNAI1Q9UI46 699 aa21.2■□□□□ 0.98
LTBP3-202ENST00000322147 TTF1Q15361 905 aaPredicted RBP21.2■□□□□ 0.98
LTBP3-202ENST00000322147 RNF41Q9H4P4 317 aaPredicted RBP21.2■□□□□ 0.98
LTBP3-202ENST00000322147 GPAA1O43292 621 aa21.19■□□□□ 0.98
LTBP3-202ENST00000322147 KIAA1328Q86T90 577 aa21.19■□□□□ 0.98
LTBP3-202ENST00000322147 STAMQ92783 540 aa21.19■□□□□ 0.98
LTBP3-202ENST00000322147 NUP88Q99567 741 aaPredicted RBP21.19■□□□□ 0.98
LTBP3-202ENST00000322147 PI16Q6UXB8 463 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms