RNA–Protein interactions for RNA: ENST00000319410.9

KARS-202, Transcript of lysyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KARS, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-202ENST00000319410 ZNF592Q92610 1267 aa11.9□□□□□ -0.5
KARS-202ENST00000319410 PSMD1Q99460 953 aa11.9□□□□□ -0.5
KARS-202ENST00000319410 COL4A1P02462 1669 aa11.9□□□□□ -0.5
KARS-202ENST00000319410 LARGE2Q8N3Y3 721 aa11.9□□□□□ -0.5
KARS-202ENST00000319410 LINS1Q8NG48 757 aa11.9□□□□□ -0.5
KARS-202ENST00000319410 DDX60Q8IY21 1712 aaKnown RBP11.9□□□□□ -0.51
KARS-202ENST00000319410 TULP2O00295 520 aa11.89□□□□□ -0.51
KARS-202ENST00000319410 IPO8O15397 1037 aaKnown RBP11.89□□□□□ -0.51
KARS-202ENST00000319410 AOC3Q16853 763 aa11.89□□□□□ -0.51
KARS-202ENST00000319410 DDX46Q7L014 1031 aaKnown RBP11.89□□□□□ -0.51
KARS-202ENST00000319410 DNAJC5GQ8N7S2 189 aa11.89□□□□□ -0.51
KARS-202ENST00000319410 JDP2Q8WYK2 163 aa11.89□□□□□ -0.51
KARS-202ENST00000319410 ATP6V0A2Q9Y487 856 aa11.89□□□□□ -0.51
KARS-202ENST00000319410 GJA3Q9Y6H8 435 aa11.89□□□□□ -0.51
KARS-202ENST00000319410 FZD9O00144 591 aa11.89□□□□□ -0.51
KARS-202ENST00000319410 EAPPQ56P03 285 aaPredicted RBP11.89□□□□□ -0.51
KARS-202ENST00000319410 API5Q9BZZ5 524 aaKnown RBP11.89□□□□□ -0.51
KARS-202ENST00000319410 TRIM6-TRIM34B2RNG4 842 aa11.88□□□□□ -0.51
KARS-202ENST00000319410 ALDH1L1O75891 902 aa11.88□□□□□ -0.51
KARS-202ENST00000319410 MCM5P33992 734 aa11.88□□□□□ -0.51
KARS-202ENST00000319410 CC2D2BQ6DHV5 1058 aa11.88□□□□□ -0.51
KARS-202ENST00000319410 BANK1Q8NDB2 785 aa11.88□□□□□ -0.51
KARS-202ENST00000319410 CCDC85AQ96PX6 553 aaPredicted RBP11.88□□□□□ -0.51
KARS-202ENST00000319410 TRIM34Q9BYJ4 488 aa11.88□□□□□ -0.51
KARS-202ENST00000319410 CWC25Q9NXE8 425 aaPredicted RBP11.88□□□□□ -0.51
KARS-202ENST00000319410 IRS4O14654 1257 aaPredicted RBP11.88□□□□□ -0.51
KARS-202ENST00000319410 PPIP5K2O43314 1243 aa11.88□□□□□ -0.51
KARS-202ENST00000319410 GRAPQ13588 217 aa11.88□□□□□ -0.51
KARS-202ENST00000319410 EXOC6Q8TAG9 804 aa11.88□□□□□ -0.51
KARS-202ENST00000319410 GRAPLQ8TC17 118 aaPredicted RBP11.88□□□□□ -0.51
KARS-202ENST00000319410 CELF1Q92879 486 aaKnown RBP11.88□□□□□ -0.51
KARS-202ENST00000319410 TMX4Q9H1E5 349 aaPredicted RBP11.88□□□□□ -0.51
KARS-202ENST00000319410 TAF1DQ9H5J8 278 aaPredicted RBP11.88□□□□□ -0.51
KARS-202ENST00000319410 NEURL1BA8MQ27 555 aa11.87□□□□□ -0.51
KARS-202ENST00000319410 PCCAP05165 728 aaPredicted RBP11.87□□□□□ -0.51
KARS-202ENST00000319410 IGKV5-2P06315 115 aa11.87□□□□□ -0.51
KARS-202ENST00000319410 GABPB1Q06547 395 aaPredicted RBP11.87□□□□□ -0.51
KARS-202ENST00000319410 BEND3Q5T5X7 828 aa11.87□□□□□ -0.51
KARS-202ENST00000319410 DPP8Q6V1X1 898 aaPredicted RBP11.87□□□□□ -0.51
KARS-202ENST00000319410 ZBTB38Q8NAP3 1195 aaPredicted RBP11.87□□□□□ -0.51
KARS-202ENST00000319410 CALCOCO1Q9P1Z2 691 aa11.87□□□□□ -0.51
KARS-202ENST00000319410 BBOX1O75936 387 aa11.87□□□□□ -0.51
KARS-202ENST00000319410 L3MBTL3Q96JM7 780 aaPredicted RBP11.87□□□□□ -0.51
KARS-202ENST00000319410 NOB1Q9ULX3 412 aaKnown RBP11.87□□□□□ -0.51
KARS-202ENST00000319410 NOL7Q9UMY1 257 aaKnown RBP11.87□□□□□ -0.51
KARS-202ENST00000319410 CDHR2Q9BYE9 1310 aa11.86□□□□□ -0.51
KARS-202ENST00000319410 IQCA1LA6NCM1 817 aa11.86□□□□□ -0.51
KARS-202ENST00000319410 RRP1P56182 461 aaKnown RBP11.86□□□□□ -0.51
KARS-202ENST00000319410 EIF6P56537 245 aaKnown RBP11.86□□□□□ -0.51
KARS-202ENST00000319410 SETQ01105 290 aaPredicted RBP11.86□□□□□ -0.51
KARS-202ENST00000319410 MPNDQ8N594 471 aa11.86□□□□□ -0.51
KARS-202ENST00000319410 ANTXR1Q9H6X2 564 aa11.86□□□□□ -0.51
KARS-202ENST00000319410 CHADLQ6NUI6 762 aa11.86□□□□□ -0.51
KARS-202ENST00000319410 SP8Q8IXZ3 490 aa11.86□□□□□ -0.51
KARS-202ENST00000319410 NIM1KQ8IY84 436 aa11.86□□□□□ -0.51
KARS-202ENST00000319410 GPC2Q8N158 579 aa11.86□□□□□ -0.51
KARS-202ENST00000319410 BCL2L13Q9BXK5 485 aa11.86□□□□□ -0.51
KARS-202ENST00000319410 SEC31BQ9NQW1 1179 aa11.86□□□□□ -0.51
KARS-202ENST00000319410 HACL1Q9UJ83 578 aa11.86□□□□□ -0.51
KARS-202ENST00000319410 CLEC11AQ9Y240 323 aa11.86□□□□□ -0.51
KARS-202ENST00000319410 DDX11L8A8MPP1 907 aa11.85□□□□□ -0.51
KARS-202ENST00000319410 H7C1W4 665 aa11.85□□□□□ -0.51
KARS-202ENST00000319410 EPHX2P34913 555 aa11.85□□□□□ -0.51
KARS-202ENST00000319410 GCKRQ14397 625 aa11.85□□□□□ -0.51
KARS-202ENST00000319410 CWF19L2Q2TBE0 894 aaKnown RBP11.85□□□□□ -0.51
KARS-202ENST00000319410 GPR101Q96P66 508 aaPredicted RBP11.85□□□□□ -0.51
KARS-202ENST00000319410 SRCIN1Q9C0H9 1055 aa11.85□□□□□ -0.51
KARS-202ENST00000319410 F6X3S4 739 aa11.85□□□□□ -0.51
KARS-202ENST00000319410 CCT4P50991 539 aaKnown RBP11.85□□□□□ -0.51
KARS-202ENST00000319410 SF3B3Q15393 1217 aaKnown RBP11.85□□□□□ -0.51
KARS-202ENST00000319410 ATP2B3Q16720 1220 aa11.85□□□□□ -0.51
KARS-202ENST00000319410 CHMP4CQ96CF2 233 aa11.85□□□□□ -0.51
KARS-202ENST00000319410 RCAN3Q9UKA8 241 aa11.85□□□□□ -0.51
KARS-202ENST00000319410 NSFL1CQ9UNZ2 370 aaKnown RBP11.85□□□□□ -0.51
KARS-202ENST00000319410 SCN4AP35499 1836 aa11.84□□□□□ -0.51
KARS-202ENST00000319410 LTBP1Q14766 1721 aa11.84□□□□□ -0.51
KARS-202ENST00000319410 LOC102724159A0A0B4J2E5 919 aa11.84□□□□□ -0.51
KARS-202ENST00000319410 BCAR3O75815 825 aa11.84□□□□□ -0.51
KARS-202ENST00000319410 EPS15P42566 896 aa11.84□□□□□ -0.51
KARS-202ENST00000319410 PWP2Q15269 919 aaKnown RBP11.84□□□□□ -0.51
KARS-202ENST00000319410 C8orf34Q49A92 452 aa11.84□□□□□ -0.51
KARS-202ENST00000319410 ZKSCAN2Q63HK3 967 aa11.84□□□□□ -0.51
KARS-202ENST00000319410 ATF7IPQ6VMQ6 1270 aa11.84□□□□□ -0.51
KARS-202ENST00000319410 MYRIPQ8NFW9 859 aa11.84□□□□□ -0.51
KARS-202ENST00000319410 KLRG1Q96E93 195 aa11.84□□□□□ -0.51
KARS-202ENST00000319410 MYCBPQ99417 103 aaPredicted RBP11.84□□□□□ -0.51
KARS-202ENST00000319410 FEZ1Q99689 392 aa11.84□□□□□ -0.51
KARS-202ENST00000319410 DUOX1Q9NRD9 1551 aa11.84□□□□□ -0.51
KARS-202ENST00000319410 RIMBP2O15034 1052 aa11.84□□□□□ -0.51
KARS-202ENST00000319410 TNNT3P45378 269 aaPredicted RBP11.84□□□□□ -0.51
KARS-202ENST00000319410 SCNN1DP51172 638 aa11.84□□□□□ -0.51
KARS-202ENST00000319410 HMGN5P82970 282 aaKnown RBP11.84□□□□□ -0.51
KARS-202ENST00000319410 MAP1SQ66K74 1059 aaPredicted RBP11.84□□□□□ -0.51
KARS-202ENST00000319410 PLA2G12BQ9BX93 195 aa11.84□□□□□ -0.51
KARS-202ENST00000319410 SLKQ9H2G2 1235 aaPredicted RBP11.84□□□□□ -0.51
KARS-202ENST00000319410 UTYO14607 1347 aa11.83□□□□□ -0.52
KARS-202ENST00000319410 RAD17O75943 681 aa11.83□□□□□ -0.52
KARS-202ENST00000319410 GPSM2P81274 684 aa11.83□□□□□ -0.52
KARS-202ENST00000319410 INTS3Q68E01 1043 aaKnown RBP11.83□□□□□ -0.52
KARS-202ENST00000319410 CTR9Q6PD62 1173 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms