RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 ZBTB3Q9H5J0 574 aa19.43■□□□□ 0.7
SSH3-201ENST00000308127 ZNF215Q9UL58 517 aaPredicted RBP19.43■□□□□ 0.7
SSH3-201ENST00000308127 SMARCC2Q8TAQ2 1214 aa19.42■□□□□ 0.7
SSH3-201ENST00000308127 TTLL7Q6ZT98 887 aa19.42■□□□□ 0.7
SSH3-201ENST00000308127 ZSCAN16Q9H4T2 348 aaPredicted RBP19.42■□□□□ 0.7
SSH3-201ENST00000308127 CLIC4Q9Y696 253 aa19.42■□□□□ 0.7
SSH3-201ENST00000308127 HSPD1P10809 573 aaKnown RBP19.42■□□□□ 0.7
SSH3-201ENST00000308127 KRT28Q7Z3Y7 464 aa19.42■□□□□ 0.7
SSH3-201ENST00000308127 ALDH8A1Q9H2A2 487 aaPredicted RBP19.42■□□□□ 0.7
SSH3-201ENST00000308127 PCDHA7Q9UN72 937 aa19.42■□□□□ 0.7
SSH3-201ENST00000308127 JCADQ9P266 1359 aa19.41■□□□□ 0.7
SSH3-201ENST00000308127 KDM6AO15550 1401 aaPredicted RBP19.41■□□□□ 0.7
SSH3-201ENST00000308127 M0R2C6 588 aa19.41■□□□□ 0.7
SSH3-201ENST00000308127 NDUFA8P51970 172 aa19.41■□□□□ 0.7
SSH3-201ENST00000308127 DPCR1Q3MIW9 517 aa19.41■□□□□ 0.7
SSH3-201ENST00000308127 RCOR1Q9UKL0 485 aa19.41■□□□□ 0.7
SSH3-201ENST00000308127 LMO7Q8WWI1 1683 aa19.41■□□□□ 0.7
SSH3-201ENST00000308127 PHKG2P15735 406 aa19.41■□□□□ 0.7
SSH3-201ENST00000308127 PDIA3P30101 505 aaKnown RBP19.41■□□□□ 0.7
SSH3-201ENST00000308127 PI16Q6UXB8 463 aa19.41■□□□□ 0.7
SSH3-201ENST00000308127 DENND2AQ9ULE3 1009 aa19.41■□□□□ 0.7
SSH3-201ENST00000308127 ERBB3P21860 1342 aa19.4■□□□□ 0.7
SSH3-201ENST00000308127 SMC2O95347 1197 aa19.4■□□□□ 0.7
SSH3-201ENST00000308127 FDPSP14324 419 aaKnown RBP19.4■□□□□ 0.7
SSH3-201ENST00000308127 RXRAP19793 462 aa19.4■□□□□ 0.7
SSH3-201ENST00000308127 SF3A1Q15459 793 aaKnown RBP19.4■□□□□ 0.7
SSH3-201ENST00000308127 MAST3O60307 1309 aa19.4■□□□□ 0.7
SSH3-201ENST00000308127 PTPN14Q15678 1187 aa19.4■□□□□ 0.7
SSH3-201ENST00000308127 WASHC4Q2M389 1173 aa19.4■□□□□ 0.7
SSH3-201ENST00000308127 LRP10Q7Z4F1 713 aa19.4■□□□□ 0.7
SSH3-201ENST00000308127 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.39■□□□□ 0.7
SSH3-201ENST00000308127 CCZ1BP86790 482 aa19.39■□□□□ 0.69
SSH3-201ENST00000308127 CCZ1P86791 482 aaPredicted RBP19.39■□□□□ 0.69
SSH3-201ENST00000308127 ATG9AQ7Z3C6 839 aa19.39■□□□□ 0.69
SSH3-201ENST00000308127 CYP27B1O15528 508 aa19.38■□□□□ 0.69
SSH3-201ENST00000308127 SNRPA1P09661 255 aaKnown RBP19.38■□□□□ 0.69
SSH3-201ENST00000308127 IFIT1P09914 478 aaKnown RBP19.38■□□□□ 0.69
SSH3-201ENST00000308127 FAM160A1Q05DH4 1040 aa19.38■□□□□ 0.69
SSH3-201ENST00000308127 STK11IPQ8N1F8 1099 aa19.38■□□□□ 0.69
SSH3-201ENST00000308127 LRRN4CLQ8ND94 238 aa19.38■□□□□ 0.69
SSH3-201ENST00000308127 ENGASEQ8NFI3 743 aa19.38■□□□□ 0.69
SSH3-201ENST00000308127 AIFM3Q96NN9 605 aa19.38■□□□□ 0.69
SSH3-201ENST00000308127 CHD2O14647 1828 aaKnown RBP19.38■□□□□ 0.69
SSH3-201ENST00000308127 MARCKSP29966 332 aaPredicted RBP19.38■□□□□ 0.69
SSH3-201ENST00000308127 GOLGA8FQ08AF8 430 aa19.38■□□□□ 0.69
SSH3-201ENST00000308127 GOLGA8DPQ0D2H9 430 aa19.38■□□□□ 0.69
SSH3-201ENST00000308127 ELF2Q15723 593 aa19.38■□□□□ 0.69
SSH3-201ENST00000308127 HSP90AA4PQ58FG1 418 aa19.38■□□□□ 0.69
SSH3-201ENST00000308127 ANKLE2Q86XL3 938 aa19.38■□□□□ 0.69
SSH3-201ENST00000308127 OSBP2Q969R2 916 aa19.38■□□□□ 0.69
SSH3-201ENST00000308127 CTNNA3Q9UI47 895 aa19.38■□□□□ 0.69
SSH3-201ENST00000308127 A1BGP04217 495 aa19.38■□□□□ 0.69
SSH3-201ENST00000308127 TATP17735 454 aaPredicted RBP19.38■□□□□ 0.69
SSH3-201ENST00000308127 ADORA1P30542 326 aa19.37■□□□□ 0.69
SSH3-201ENST00000308127 EXOSC10Q01780 885 aaKnown RBP19.37■□□□□ 0.69
SSH3-201ENST00000308127 STK38Q15208 465 aa19.37■□□□□ 0.69
SSH3-201ENST00000308127 TMC6Q7Z403 805 aa19.37■□□□□ 0.69
SSH3-201ENST00000308127 IFNKQ9P0W0 207 aa19.37■□□□□ 0.69
SSH3-201ENST00000308127 CARMIL3Q8ND23 1372 aa19.37■□□□□ 0.69
SSH3-201ENST00000308127 GORABQ5T7V8 394 aa19.37■□□□□ 0.69
SSH3-201ENST00000308127 CEP57L1Q8IYX8 460 aa19.37■□□□□ 0.69
SSH3-201ENST00000308127 ST7Q9NRC1 585 aa19.37■□□□□ 0.69
SSH3-201ENST00000308127 ADGRL3Q9HAR2 1447 aa19.36■□□□□ 0.69
SSH3-201ENST00000308127 NKX2-3Q8TAU0 364 aa19.36■□□□□ 0.69
SSH3-201ENST00000308127 XPO4Q9C0E2 1151 aaKnown RBP19.36■□□□□ 0.69
SSH3-201ENST00000308127 ANO10Q9NW15 660 aa19.36■□□□□ 0.69
SSH3-201ENST00000308127 C5P01031 1676 aa19.36■□□□□ 0.69
SSH3-201ENST00000308127 A0A1B0GUL7 405 aa19.36■□□□□ 0.69
SSH3-201ENST00000308127 NBPF26B4DH59 902 aa19.36■□□□□ 0.69
SSH3-201ENST00000308127 FOXO4P98177 505 aa19.36■□□□□ 0.69
SSH3-201ENST00000308127 RABL6Q3YEC7 729 aaPredicted RBP19.36■□□□□ 0.69
SSH3-201ENST00000308127 NBPF14Q5TI25 921 aa19.36■□□□□ 0.69
SSH3-201ENST00000308127 NAA16Q6N069 864 aaPredicted RBP19.36■□□□□ 0.69
SSH3-201ENST00000308127 NBPF10Q6P3W6 841 aaKnown RBP19.36■□□□□ 0.69
SSH3-201ENST00000308127 NBPF11Q86T75 865 aa19.36■□□□□ 0.69
SSH3-201ENST00000308127 NBPF15Q8N660 670 aa19.36■□□□□ 0.69
SSH3-201ENST00000308127 NCAPD2Q15021 1401 aa19.36■□□□□ 0.69
SSH3-201ENST00000308127 LMOD1P29536 600 aaPredicted RBP19.35■□□□□ 0.69
SSH3-201ENST00000308127 MRPS27Q92552 414 aaKnown RBP19.35■□□□□ 0.69
SSH3-201ENST00000308127 MRFAP1L1Q96HT8 127 aa19.35■□□□□ 0.69
SSH3-201ENST00000308127 ZNF396Q96N95 335 aaPredicted RBP19.35■□□□□ 0.69
SSH3-201ENST00000308127 KIF28PB7ZC32 967 aa19.35■□□□□ 0.69
SSH3-201ENST00000308127 PDIA4P13667 645 aaKnown RBP19.35■□□□□ 0.69
SSH3-201ENST00000308127 CASP7P55210 303 aa19.35■□□□□ 0.69
SSH3-201ENST00000308127 CABP4P57796 275 aa19.35■□□□□ 0.69
SSH3-201ENST00000308127 SCARF1Q14162 830 aa19.35■□□□□ 0.69
SSH3-201ENST00000308127 KMT5BQ4FZB7 885 aa19.35■□□□□ 0.69
SSH3-201ENST00000308127 KLF18A0A0U1RQI7 1052 aa19.34■□□□□ 0.69
SSH3-201ENST00000308127 GOLGA8BA8MQT2 603 aa19.34■□□□□ 0.69
SSH3-201ENST00000308127 ZRSR1Q15695 479 aaKnown RBP19.34■□□□□ 0.69
SSH3-201ENST00000308127 ZMYM1Q5SVZ6 1142 aa19.34■□□□□ 0.69
SSH3-201ENST00000308127 ZNF771Q7L3S4 317 aaPredicted RBP19.34■□□□□ 0.69
SSH3-201ENST00000308127 FMR1NBQ8N0W7 255 aaPredicted RBP19.34■□□□□ 0.69
SSH3-201ENST00000308127 RGPD5Q99666 1765 aa19.34■□□□□ 0.69
SSH3-201ENST00000308127 ATP1A3P13637 1013 aa19.34■□□□□ 0.69
SSH3-201ENST00000308127 IFNL2Q8IZJ0 200 aa19.34■□□□□ 0.69
SSH3-201ENST00000308127 CCAR2Q8N163 923 aaKnown RBP19.34■□□□□ 0.69
SSH3-201ENST00000308127 C8orf76Q96K31 380 aa19.34■□□□□ 0.69
SSH3-201ENST00000308127 PAXBP1Q9Y5B6 917 aa19.34■□□□□ 0.69
SSH3-201ENST00000308127 MEGF6O75095 1541 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms