RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 TDRD12Q587J7 1177 aaKnown RBP12.94□□□□□ -0.34
USP6NL-201ENST00000277575 MRPS27Q92552 414 aaKnown RBP12.94□□□□□ -0.34
USP6NL-201ENST00000277575 EYA3Q99504 573 aa12.94□□□□□ -0.34
USP6NL-201ENST00000277575 MBD4O95243 580 aa12.94□□□□□ -0.34
USP6NL-201ENST00000277575 DESP17661 470 aa12.94□□□□□ -0.34
USP6NL-201ENST00000277575 USP48Q86UV5 1035 aa12.94□□□□□ -0.34
USP6NL-201ENST00000277575 SUCLG2Q96I99 432 aa12.94□□□□□ -0.34
USP6NL-201ENST00000277575 ZNF594Q96JF6 807 aaPredicted RBP12.94□□□□□ -0.34
USP6NL-201ENST00000277575 ADCY5O95622 1261 aa12.94□□□□□ -0.34
USP6NL-201ENST00000277575 CALM1P0DP23 149 aa12.94□□□□□ -0.34
USP6NL-201ENST00000277575 CALM2P0DP24 149 aa12.94□□□□□ -0.34
USP6NL-201ENST00000277575 CALM3P0DP25 149 aa12.94□□□□□ -0.34
USP6NL-201ENST00000277575 NEFHP12036 1026 aa12.94□□□□□ -0.34
USP6NL-201ENST00000277575 MARCKSP29966 332 aaPredicted RBP12.94□□□□□ -0.34
USP6NL-201ENST00000277575 IL17REQ8NFR9 667 aa12.94□□□□□ -0.34
USP6NL-201ENST00000277575 KIF18AQ8NI77 898 aa12.94□□□□□ -0.34
USP6NL-201ENST00000277575 TRIM75PA6NK02 468 aa12.94□□□□□ -0.34
USP6NL-201ENST00000277575 KIF5CO60282 957 aa12.94□□□□□ -0.34
USP6NL-201ENST00000277575 NAPAP54920 295 aa12.94□□□□□ -0.34
USP6NL-201ENST00000277575 KIF4BQ2VIQ3 1234 aa12.94□□□□□ -0.34
USP6NL-201ENST00000277575 DACT1Q9NYF0 836 aa12.94□□□□□ -0.34
USP6NL-201ENST00000277575 ARHGEF5Q12774 1597 aa12.94□□□□□ -0.34
USP6NL-201ENST00000277575 YEATS4O95619 227 aa12.93□□□□□ -0.34
USP6NL-201ENST00000277575 CETN1Q12798 172 aa12.93□□□□□ -0.34
USP6NL-201ENST00000277575 TMC6Q7Z403 805 aa12.93□□□□□ -0.34
USP6NL-201ENST00000277575 VEZTQ9HBM0 779 aa12.93□□□□□ -0.34
USP6NL-201ENST00000277575 CCDC87Q9NVE4 849 aa12.93□□□□□ -0.34
USP6NL-201ENST00000277575 DENND2AQ9ULE3 1009 aa12.93□□□□□ -0.34
USP6NL-201ENST00000277575 GSDMDP57764 484 aa12.93□□□□□ -0.34
USP6NL-201ENST00000277575 PUM3Q15397 648 aaKnown RBP12.93□□□□□ -0.34
USP6NL-201ENST00000277575 ZSCAN23Q3MJ62 389 aa12.93□□□□□ -0.34
USP6NL-201ENST00000277575 PAXIP1Q6ZW49 1069 aaPredicted RBP12.93□□□□□ -0.34
USP6NL-201ENST00000277575 JDP2Q8WYK2 163 aa12.93□□□□□ -0.34
USP6NL-201ENST00000277575 URI1O94763 535 aaPredicted RBP12.93□□□□□ -0.34
USP6NL-201ENST00000277575 LIG1P18858 919 aa12.93□□□□□ -0.34
USP6NL-201ENST00000277575 RUFY3Q7L099 469 aa12.93□□□□□ -0.34
USP6NL-201ENST00000277575 LRRC27Q9C0I9 530 aa12.93□□□□□ -0.34
USP6NL-201ENST00000277575 HELLSQ9NRZ9 838 aa12.93□□□□□ -0.34
USP6NL-201ENST00000277575 NEMFO60524 1076 aa12.92□□□□□ -0.34
USP6NL-201ENST00000277575 CALML3P27482 149 aa12.92□□□□□ -0.34
USP6NL-201ENST00000277575 CETN2P41208 172 aa12.92□□□□□ -0.34
USP6NL-201ENST00000277575 AFMP43652 599 aa12.92□□□□□ -0.34
USP6NL-201ENST00000277575 NBPF14Q5TI25 921 aa12.92□□□□□ -0.34
USP6NL-201ENST00000277575 PTPDC1A2A3K4 754 aa12.92□□□□□ -0.34
USP6NL-201ENST00000277575 CPA1P15085 419 aa12.92□□□□□ -0.34
USP6NL-201ENST00000277575 STXBP4Q6ZWJ1 553 aa12.92□□□□□ -0.34
USP6NL-201ENST00000277575 XAGE2Q96GT9 111 aa12.92□□□□□ -0.34
USP6NL-201ENST00000277575 INTS4Q96HW7 963 aaKnown RBP12.92□□□□□ -0.34
USP6NL-201ENST00000277575 TRMT1Q9NXH9 659 aaKnown RBP12.92□□□□□ -0.34
USP6NL-201ENST00000277575 ERMNQ8TAM6 284 aa12.92□□□□□ -0.34
USP6NL-201ENST00000277575 CENPHQ9H3R5 247 aa12.92□□□□□ -0.34
USP6NL-201ENST00000277575 METP08581 1390 aa12.92□□□□□ -0.34
USP6NL-201ENST00000277575 KIAA0232Q92628 1395 aa12.92□□□□□ -0.34
USP6NL-201ENST00000277575 SPTLC2O15270 562 aa12.92□□□□□ -0.34
USP6NL-201ENST00000277575 GIGYF1O75420 1035 aaPredicted RBP12.92□□□□□ -0.34
USP6NL-201ENST00000277575 EIF3JO75822 258 aaKnown RBP12.92□□□□□ -0.34
USP6NL-201ENST00000277575 HIBADHP31937 336 aaKnown RBP12.92□□□□□ -0.34
USP6NL-201ENST00000277575 JAKMIP3Q5VZ66 844 aa12.92□□□□□ -0.34
USP6NL-201ENST00000277575 ERVV-2B6SEH9 535 aa12.91□□□□□ -0.34
USP6NL-201ENST00000277575 N4BP3O15049 544 aa12.91□□□□□ -0.34
USP6NL-201ENST00000277575 RXRAP19793 462 aa12.91□□□□□ -0.34
USP6NL-201ENST00000277575 POLD1P28340 1107 aa12.91□□□□□ -0.34
USP6NL-201ENST00000277575 TRIM47Q96LD4 638 aa12.91□□□□□ -0.34
USP6NL-201ENST00000277575 USO1O60763 962 aaKnown RBP12.91□□□□□ -0.34
USP6NL-201ENST00000277575 UVSSAQ2YD98 709 aa12.91□□□□□ -0.34
USP6NL-201ENST00000277575 LRSAM1Q6UWE0 723 aa12.91□□□□□ -0.34
USP6NL-201ENST00000277575 C6orf50Q9HD87 102 aa12.91□□□□□ -0.34
USP6NL-201ENST00000277575 RTL9Q8NET4 1388 aa12.91□□□□□ -0.34
USP6NL-201ENST00000277575 KCNQ3O43525 872 aa12.91□□□□□ -0.34
USP6NL-201ENST00000277575 TRIM21P19474 475 aaKnown RBP12.91□□□□□ -0.34
USP6NL-201ENST00000277575 CCDC129Q6ZRS4 1044 aa12.91□□□□□ -0.34
USP6NL-201ENST00000277575 SYCP3Q8IZU3 236 aa12.91□□□□□ -0.34
USP6NL-201ENST00000277575 ZMYM4Q5VZL5 1548 aa12.91□□□□□ -0.34
USP6NL-201ENST00000277575 SPATA31E1Q6ZUB1 1445 aa12.91□□□□□ -0.34
USP6NL-201ENST00000277575 TBCAO75347 108 aaKnown RBP12.91□□□□□ -0.34
USP6NL-201ENST00000277575 UFL1O94874 794 aa12.91□□□□□ -0.34
USP6NL-201ENST00000277575 MYCNP04198 464 aaPredicted RBP12.91□□□□□ -0.34
USP6NL-201ENST00000277575 STAT6P42226 847 aa12.91□□□□□ -0.34
USP6NL-201ENST00000277575 RBM26Q5T8P6 1007 aaKnown RBP12.91□□□□□ -0.34
USP6NL-201ENST00000277575 TTC6Q86TZ1 520 aa12.91□□□□□ -0.34
USP6NL-201ENST00000277575 KRI1Q8N9T8 703 aaKnown RBP12.91□□□□□ -0.34
USP6NL-201ENST00000277575 APPBP2Q92624 585 aa12.91□□□□□ -0.34
USP6NL-201ENST00000277575 EXOC1Q9NV70 894 aa12.91□□□□□ -0.34
USP6NL-201ENST00000277575 RMND1Q9NWS8 449 aa12.91□□□□□ -0.34
USP6NL-201ENST00000277575 INSRP06213 1382 aa12.9□□□□□ -0.34
USP6NL-201ENST00000277575 FAM114A1Q8IWE2 563 aa12.9□□□□□ -0.34
USP6NL-201ENST00000277575 RBM17Q96I25 401 aaKnown RBP12.9□□□□□ -0.34
USP6NL-201ENST00000277575 ABCA8O94911 1581 aa12.9□□□□□ -0.34
USP6NL-201ENST00000277575 H0YHG0 523 aa12.9□□□□□ -0.34
USP6NL-201ENST00000277575 PHKG2P15735 406 aa12.9□□□□□ -0.34
USP6NL-201ENST00000277575 KBTBD3Q8NAB2 608 aa12.9□□□□□ -0.34
USP6NL-201ENST00000277575 RRAGBQ5VZM2 374 aa12.89□□□□□ -0.35
USP6NL-201ENST00000277575 TEX11Q8IYF3 940 aa12.89□□□□□ -0.35
USP6NL-201ENST00000277575 ZKSCAN3Q9BRR0 538 aa12.89□□□□□ -0.35
USP6NL-201ENST00000277575 SGSM2O43147 1006 aa12.89□□□□□ -0.35
USP6NL-201ENST00000277575 TAF5LO75529 589 aa12.89□□□□□ -0.35
USP6NL-201ENST00000277575 DNA2P51530 1060 aa12.89□□□□□ -0.35
USP6NL-201ENST00000277575 SMARCC2Q8TAQ2 1214 aa12.89□□□□□ -0.35
USP6NL-201ENST00000277575 FAM227BQ96M60 508 aa12.89□□□□□ -0.35
USP6NL-201ENST00000277575 C16orf45Q96MC5 204 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms