RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 U2af1l4Q8BGJ9 220 aa17.94■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Iffo1Q8BXL9 562 aa17.94■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Ppfibp1Q8C8U0 969 aaKnown RBP17.94■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Zbtb3Q91X45 518 aa17.94■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Tmx3Q8BXZ1 456 aa17.93■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Svs3aF2Z472 265 aa17.93■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Mybl2P48972 704 aa17.93■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Bloc1s4Q8VED2 215 aa17.93■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Zcrb1Q9CZ96 217 aaKnown RBP17.93■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Aox4Q3TYQ9 1336 aa17.93■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Traf1P39428 409 aa17.93■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Igflr1Q3U4N7 345 aa17.93■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Klhl30Q8C3F7 581 aa17.93■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Zfp853A0A1D5RM95 733 aa17.92■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Eya2O08575 532 aa17.92■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Prkab2Q6PAM0 271 aa17.92■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Prim1P20664 417 aa17.92■□□□□ 0.46
Clcn3-203ENSMUST00000093490 ClasrpQ8CFC7 668 aa17.92■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Pdzd9Q9D9M4 266 aa17.92■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Usp54Q8BL06 1588 aaKnown RBP17.92■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Matr3Q8K310 846 aaKnown RBP17.91■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Slx4ipQ9D7Y9 413 aa17.91■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Hip1rQ9JKY5 1068 aa17.91■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Syt1P46096 421 aa17.91■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Snapc4Q8BP86 1333 aa17.91■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Ehbp1Q69ZW3 1231 aa17.91■□□□□ 0.46
Clcn3-203ENSMUST00000093490 DonsonQ9QXP4 560 aa17.91■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Mcm6P97311 821 aa17.91■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Myl6bQ8CI43 207 aa17.91■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Tubb5P99024 444 aaKnown RBP17.91■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Ttll12Q3UDE2 639 aa17.9■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Gm16486A0A1D5RMD1 1434 aa17.9■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Kif21bQ9QXL1 1668 aa17.9■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Hdhd2Q3UGR5 259 aa17.9■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Smarcc2Q6PDG5 1213 aa17.9■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Trpm2Q91YD4 1506 aa17.9■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Gbp8Q2V6D6 525 aa17.9■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Ssrp1Q08943 708 aaKnown RBP17.9■□□□□ 0.46
Clcn3-203ENSMUST00000093490 RragbQ6NTA4 374 aa17.9■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Shtn1Q8K2Q9 631 aa17.9■□□□□ 0.46
Clcn3-203ENSMUST00000093490 NpcdF8VQB8 469 aa17.89■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Fermt1P59113 677 aa17.89■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Atp8a2P98200 1148 aa17.89■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Gbp1Q01514 589 aa17.89■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Haus2Q9CQS9 234 aa17.89■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Erbb4Q61527 1308 aa17.89■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Yeats2Q3TUF7 1407 aa17.89■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Setdb1O88974 1307 aa17.89■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Cdca7Q9D0M2 382 aa17.89■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Q9D5Q8 446 aa17.89■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Homer1Q9Z2Y3 366 aa17.89■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Mast3Q3U214 1321 aa17.89■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Casp1P29452 402 aa17.89■□□□□ 0.45
Clcn3-203ENSMUST00000093490 NmiO35309 314 aa17.88■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Grpel1Q99LP6 217 aa17.88■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Gna11P21278 359 aa17.88■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Tekt3Q6X6Z7 490 aa17.88■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Ranbp6Q8BIV3 1105 aa17.88■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Ccdc122Q8BVN0 290 aa17.88■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Syce1Q9D495 329 aa17.88■□□□□ 0.45
Clcn3-203ENSMUST00000093490 DesP31001 469 aaKnown RBP17.88■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Pa2g4P50580 394 aaKnown RBP17.88■□□□□ 0.45
Clcn3-203ENSMUST00000093490 SfpqQ8VIJ6 699 aaKnown RBP17.88■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Kif14L0N7N1 1674 aaKnown RBP17.88■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Cnksr1A2A9K7 700 aa17.88■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Esyt1Q3U7R1 1092 aaKnown RBP17.88■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Zkscan4Q5SZT6 480 aa17.88■□□□□ 0.45
Clcn3-203ENSMUST00000093490 BrapQ99MP8 591 aa17.88■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Depdc5P61460 1591 aa17.87■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Olfr247E9PVJ7 320 aa17.87■□□□□ 0.45
Clcn3-203ENSMUST00000093490 E9QMW4 1145 aa17.87■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Olfr819K7N727 320 aa17.87■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Dnm1P39053 867 aa17.87■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Clip2Q9Z0H8 1047 aa17.87■□□□□ 0.45
Clcn3-203ENSMUST00000093490 TrdnE9Q9K5 693 aa17.87■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Sult6b1P0CC03 303 aa17.87■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Znf697Q569E7 569 aa17.87■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Zkscan8Q8BSL0 588 aa17.87■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Kiaa1551Q5DTW7 1521 aa17.87■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Ano8Q6PB70 1060 aa17.87■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Luc7l2Q7TNC4 392 aaKnown RBP17.87■□□□□ 0.45
Clcn3-203ENSMUST00000093490 DymQ8CHY3 669 aa17.87■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Frat2Q8K025 231 aa17.87■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Gle1Q8R322 699 aa17.87■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Rufy3Q9D394 469 aa17.87■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Sptlc2P97363 560 aaKnown RBP17.86■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Miga2Q8BK03 593 aa17.86■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Ercc3P49135 783 aa17.86■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Pdzrn3Q69ZS0 1063 aa17.86■□□□□ 0.45
Clcn3-203ENSMUST00000093490 IqcgQ80W32 419 aa17.86■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Col20a1Q923P0 1320 aa17.86■□□□□ 0.45
Clcn3-203ENSMUST00000093490 RalylQ8BTF8 293 aa17.86■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Ctnnbl1Q9CWL8 563 aaKnown RBP17.86■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Hsf2bpQ9D4G2 338 aa17.86■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Abcc3B2RX12 1523 aa17.86■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Ano1Q8BHY3 960 aa17.85■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Rtn1Q8K0T0 780 aa17.85■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Vps16Q920Q4 839 aa17.85■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Gas8Q60779 478 aa17.85■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Spata24Q6P926 205 aa17.85■□□□□ 0.45
Retrieved 100 of 22,080 RNA–protein pairs in 19.8 ms