RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, human

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF1-222	ENST00000600517	CLN6	Q9NWW5	311 aa		11.31	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	WARS2	Q9UGM6	360 aa	Known RBP	11.31	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	ZNF391	Q9UJN7	358 aa		11.31	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	COPS3	Q9UNS2	423 aa		11.31	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	SVEP1	Q4LDE5	3571 aa		11.31	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	PPIAL4E	A0A075B759	164 aa		11.3	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	11.3	□□□□□ -0.6
ARHGEF1-222	ENST00000600517		E9PQ18	207 aa		11.3	□□□□□ -0.6
ARHGEF1-222	ENST00000600517		F5H0A9	414 aa	Predicted RBP	11.3	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	PPIAL4D	F5H284	164 aa		11.3	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	PSMD9	O00233	223 aa		11.3	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	EI24	O14681	340 aa		11.3	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	FOXH1	O75593	365 aa		11.3	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	WNT2	P09544	360 aa		11.3	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	PPIAL4F	P0DN26	164 aa		11.3	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	IRF2	P14316	349 aa		11.3	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	ZFP36	P26651	326 aa	Known RBP	11.3	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	HTR1F	P30939	366 aa		11.3	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	ALDH3A2	P51648	485 aa		11.3	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	MZT1	Q08AG7	82 aa		11.3	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	OR8B8	Q15620	311 aa		11.3	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	SNCB	Q16143	134 aa		11.3	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	GFOD2	Q3B7J2	385 aa		11.3	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	FAHD2B	Q6P2I3	314 aa	Predicted RBP	11.3	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	ZNF322	Q6U7Q0	402 aa	Predicted RBP	11.3	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	SLC35F2	Q8IXU6	374 aa		11.3	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	CBR4	Q8N4T8	237 aa		11.3	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	OR8B12	Q8NGG6	310 aa		11.3	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	OR11L1	Q8NGX0	322 aa		11.3	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	ITFG2	Q969R8	447 aa		11.3	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	FAHD2A	Q96GK7	314 aa		11.3	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	HRASLS5	Q96KN8	279 aa		11.3	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	FN3KRP	Q9HA64	309 aa		11.3	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	UFSP2	Q9NUQ7	469 aa		11.3	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	C14orf119	Q9NWQ9	140 aa		11.3	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	FAM206A	Q9NX38	181 aa		11.3	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	RNF7	Q9UBF6	113 aa		11.3	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	RHBDD3	Q9Y3P4	386 aa		11.3	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	PPIAL4A	Q9Y536	164 aa		11.3	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	ORC6	Q9Y5N6	252 aa		11.3	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	DYSF	O75923	2080 aa		11.3	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	FBN1	P35555	2871 aa	Known RBP	11.3	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	TANC2	Q9HCD6	1990 aa		11.3	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	PPIAL4C	A0A0B4J2A2	164 aa		11.29	□□□□□ -0.6
ARHGEF1-222	ENST00000600517		A0A0U1RQV5	110 aa		11.29	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	TMEM269	A0A1B0GVZ9	245 aa		11.29	□□□□□ -0.6
ARHGEF1-222	ENST00000600517		J3QLI3	93 aa		11.29	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	PHYH	O14832	338 aa		11.29	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	FAM20B	O75063	409 aa		11.29	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	ZNF205	O95201	554 aa		11.29	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	PNP	P00491	289 aa		11.29	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	GATA3	P23771	443 aa		11.29	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	RIDA	P52758	137 aa	Known RBP	11.29	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	CDC42	P60953	191 aa		11.29	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	CXCR4	P61073	352 aa		11.29	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	LCN2	P80188	198 aa		11.29	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	TMED1	Q13445	227 aa		11.29	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	ZNF404	Q494X3	552 aa		11.29	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	SLC25A30	Q5SVS4	291 aa		11.29	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	ZNF771	Q7L3S4	317 aa	Predicted RBP	11.29	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	KRT74	Q7RTS7	529 aa		11.29	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	FTMT	Q8N4E7	242 aa		11.29	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	RFLNB	Q8N5W9	214 aa		11.29	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	OR51G2	Q8NGK0	314 aa		11.29	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	DVL3	Q92997	716 aa	Predicted RBP	11.29	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	UBE2F	Q969M7	185 aa		11.29	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	EME1	Q96AY2	570 aa		11.29	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	LYZL4	Q96KX0	146 aa		11.29	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	APOL4	Q9BPW4	351 aa		11.29	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	TMEM246	Q9BRR3	403 aa		11.29	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	IKZF2	Q9UKS7	526 aa		11.29	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	11.29	□□□□□ -0.6
ARHGEF1-222	ENST00000600517		A0A0G2JMP0	313 aa		11.28	□□□□□ -0.6
ARHGEF1-222	ENST00000600517		A0A0X1KG70	313 aa		11.28	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	CEACAM18	A8MTB9	384 aa		11.28	□□□□□ -0.6
ARHGEF1-222	ENST00000600517		A8MXK9	166 aa		11.28	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	ZNF670-ZNF695	F2Z2N8	137 aa		11.28	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	CST4	P01036	141 aa		11.28	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	AVP	P01185	164 aa		11.28	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	GRP	P07492	148 aa		11.28	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	ACKR3	P25106	362 aa		11.28	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	SRP14	P37108	136 aa	Known RBP	11.28	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	GNAL	P38405	381 aa		11.28	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	EGR3	Q06889	387 aa		11.28	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	POU4F2	Q12837	409 aa		11.28	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	ZNF829	Q3KNS6	432 aa	Predicted RBP	11.28	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	ZIK1	Q3SY52	487 aa	Predicted RBP	11.28	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	FAM201A	Q5SY85	155 aa		11.28	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	DCAF12L2	Q5VW00	463 aa		11.28	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	C11orf53	Q8IXP5	236 aa		11.28	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	PQLC1	Q8N2U9	271 aa		11.28	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	GALNT4	Q8N4A0	578 aa		11.28	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	OR4M2	Q8NGB6	313 aa		11.28	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	OR8S1	Q8NH09	359 aa		11.28	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	RFK	Q969G6	155 aa		11.28	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	MDFI	Q99750	246 aa		11.28	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	SLC29A1	Q99808	456 aa		11.28	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	C9orf16	Q9BUW7	83 aa		11.28	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	TMPRSS13	Q9BYE2	586 aa		11.28	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	PBOV1	Q9GZY1	135 aa		11.28	□□□□□ -0.6

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