RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 GABRB1P18505 474 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 ARNTP27540 789 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 SPRED3Q2MJR0 410 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 ZBTB37Q5TC79 503 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 RPUSD3Q6P087 351 aaKnown RBP7.05□□□□□ -1.28
VPS13D-211ENST00000543710 OR10Z1Q8NGY1 313 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 LINC01599Q8WXQ3 324 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 MRGPRX3Q96LB0 322 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 TMEM204Q9BSN7 226 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 CTDSP1Q9GZU7 261 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 TUBG2Q9NRH3 451 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 TAS2R4Q9NYW5 299 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 DUSP13Q9UII6 198 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 SLC22A13Q9Y226 551 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 NDUFB6O95139 128 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 CAPZBP47756 277 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 ERHP84090 104 aaKnown RBP7.05□□□□□ -1.28
VPS13D-211ENST00000543710 OR8G1Q15617 311 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 CST9LP1Q5W188 147 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 C11orf87Q6NUJ2 197 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 CYB561A3Q8NBI2 242 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 ADOQ96SZ5 270 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 NMNAT3Q96T66 252 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 KIAA1456Q9P272 454 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 SLC17A2O00624 439 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 TMIGD3P0DMS9 266 aaPredicted RBP7.05□□□□□ -1.28
VPS13D-211ENST00000543710 RPL12P30050 165 aaKnown RBP7.05□□□□□ -1.28
VPS13D-211ENST00000543710 P2RY1P47900 373 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 CRMP1Q14194 572 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 CTF1Q16619 201 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 SLC25A35Q3KQZ1 300 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 PHYHD1Q5SRE7 291 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 TEX261Q6UWH6 196 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 ADPRHL1Q8NDY3 354 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 ABHD14BQ96IU4 210 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 OR5M11Q96RB7 305 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 ZMIZ1Q9ULJ6 1067 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 U3KQ87 197 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 LY75O60449 1722 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 M0R1B8 84 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 NXPH2O95156 264 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 SFT2D2O95562 160 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 BMP5P22003 454 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 G0S2P27469 103 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 HES1Q14469 280 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 SHBQ15464 509 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 TMEM128Q5BJH2 165 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 ZBTB34Q8NCN2 500 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 C3orf58Q8NDZ4 430 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 NFAM1Q8NET5 270 aaPredicted RBP7.05□□□□□ -1.28
VPS13D-211ENST00000543710 PFN4Q8NHR9 129 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 DVL3Q92997 716 aaPredicted RBP7.05□□□□□ -1.28
VPS13D-211ENST00000543710 MRPS24Q96EL2 167 aaKnown RBP7.05□□□□□ -1.28
VPS13D-211ENST00000543710 REEP6Q96HR9 211 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 WDR61Q9GZS3 305 aaKnown RBP7.05□□□□□ -1.28
VPS13D-211ENST00000543710 SLC2A9Q9NRM0 540 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 MED9Q9NWA0 146 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 OR5H14A6NHG9 310 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 GPR31O00270 319 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 CDK2AP1O14519 115 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 BTN1A1Q13410 526 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 ZNF141Q15928 474 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 ZNF658BQ4V348 819 aaPredicted RBP7.05□□□□□ -1.28
VPS13D-211ENST00000543710 GLYATL3Q5SZD4 288 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 GUSBP11Q6P575 273 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 CYHR1Q6ZMK1 362 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 ESPNLQ6ZVH7 1005 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 CADM3Q8N126 398 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 DUSP18Q8NEJ0 188 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 OR10P1Q8NGE3 313 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 OR52N4Q8NGI2 321 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 ADTRPQ96IZ2 230 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 AMDHD2Q9Y303 409 aa7.05□□□□□ -1.28
VPS13D-211ENST00000543710 HSD17B6O14756 317 aa7.04□□□□□ -1.28
VPS13D-211ENST00000543710 BET1O15155 118 aa7.04□□□□□ -1.28
VPS13D-211ENST00000543710 PPIHO43447 177 aaKnown RBP7.04□□□□□ -1.28
VPS13D-211ENST00000543710 GPX5O75715 221 aa7.04□□□□□ -1.28
VPS13D-211ENST00000543710 DBHP09172 617 aa7.04□□□□□ -1.28
VPS13D-211ENST00000543710 RRASP10301 218 aa7.04□□□□□ -1.28
VPS13D-211ENST00000543710 RGRP47804 291 aa7.04□□□□□ -1.28
VPS13D-211ENST00000543710 SMAGPQ0VAQ4 97 aa7.04□□□□□ -1.28
VPS13D-211ENST00000543710 ZNF345Q14585 488 aa7.04□□□□□ -1.28
VPS13D-211ENST00000543710 ZNF239Q16600 458 aaKnown RBP7.04□□□□□ -1.28
VPS13D-211ENST00000543710 FAM58AQ8N1B3 248 aa7.04□□□□□ -1.28
VPS13D-211ENST00000543710 CELF2-AS1Q8N7Q2 184 aa7.04□□□□□ -1.28
VPS13D-211ENST00000543710 OR1L4Q8NGR5 311 aa7.04□□□□□ -1.28
VPS13D-211ENST00000543710 MS4A5Q9H3V2 200 aa7.04□□□□□ -1.28
VPS13D-211ENST00000543710 SPTY2D1-AS1A0A0U1RR47 76 aa7.04□□□□□ -1.28
VPS13D-211ENST00000543710 FGF2P09038 288 aa7.04□□□□□ -1.28
VPS13D-211ENST00000543710 SPCS3P61009 180 aa7.04□□□□□ -1.28
VPS13D-211ENST00000543710 ZNF740Q8NDX6 193 aa7.04□□□□□ -1.28
VPS13D-211ENST00000543710 OR2AK2Q8NG84 335 aa7.04□□□□□ -1.28
VPS13D-211ENST00000543710 OR4D6Q8NGJ1 314 aa7.04□□□□□ -1.28
VPS13D-211ENST00000543710 H1FXQ92522 213 aaKnown RBP7.04□□□□□ -1.28
VPS13D-211ENST00000543710 ZNF705GA8MUZ8 300 aaPredicted RBP7.04□□□□□ -1.28
VPS13D-211ENST00000543710 DEDDO75618 318 aa7.04□□□□□ -1.28
VPS13D-211ENST00000543710 NME2P22392 152 aa7.04□□□□□ -1.28
VPS13D-211ENST00000543710 SSTR4P31391 388 aa7.04□□□□□ -1.28
VPS13D-211ENST00000543710 LIPHQ8WWY8 451 aa7.04□□□□□ -1.28
VPS13D-211ENST00000543710 FBXO17Q96EF6 278 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms