RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 RIF1Q5UIP0 2472 aaKnown RBP14.64□□□□□ -0.07
SAMM50-201ENST00000350028 IGKV3D-15A0A087WSY6 115 aa14.63□□□□□ -0.07
SAMM50-201ENST00000350028 C5orf63A6NC05 138 aa14.63□□□□□ -0.07
SAMM50-201ENST00000350028 TMEM235A6NFC5 223 aa14.63□□□□□ -0.07
SAMM50-201ENST00000350028 WIPF3A6NGB9 483 aa14.63□□□□□ -0.07
SAMM50-201ENST00000350028 ZNF736B4DX44 427 aaPredicted RBP14.63□□□□□ -0.07
SAMM50-201ENST00000350028 SYNGR3O43761 229 aa14.63□□□□□ -0.07
SAMM50-201ENST00000350028 LHX2P50458 406 aa14.63□□□□□ -0.07
SAMM50-201ENST00000350028 PCBD1P61457 104 aa14.63□□□□□ -0.07
SAMM50-201ENST00000350028 LINC00696Q6ZRV3 163 aa14.63□□□□□ -0.07
SAMM50-201ENST00000350028 PIP4P1Q86T03 277 aa14.63□□□□□ -0.07
SAMM50-201ENST00000350028 FJX1Q86VR8 437 aa14.63□□□□□ -0.07
SAMM50-201ENST00000350028 C9orf62Q8N4C0 152 aa14.63□□□□□ -0.07
SAMM50-201ENST00000350028 IL22RA1Q8N6P7 574 aa14.63□□□□□ -0.07
SAMM50-201ENST00000350028 OR1F12Q8NHA8 337 aa14.63□□□□□ -0.07
SAMM50-201ENST00000350028 GRPEL2Q8TAA5 225 aa14.63□□□□□ -0.07
SAMM50-201ENST00000350028 ZNF845Q96IR2 970 aaPredicted RBP14.63□□□□□ -0.07
SAMM50-201ENST00000350028 GPER1Q99527 375 aa14.63□□□□□ -0.07
SAMM50-201ENST00000350028 FOXB1Q99853 325 aa14.63□□□□□ -0.07
SAMM50-201ENST00000350028 SLC25A21Q9BQT8 299 aaPredicted RBP14.63□□□□□ -0.07
SAMM50-201ENST00000350028 ALX4Q9H161 411 aaPredicted RBP14.63□□□□□ -0.07
SAMM50-201ENST00000350028 ZMAT3Q9HA38 289 aaKnown RBP14.63□□□□□ -0.07
SAMM50-201ENST00000350028 GPR35Q9HC97 309 aa14.63□□□□□ -0.07
SAMM50-201ENST00000350028 PLA2G3Q9NZ20 509 aa14.63□□□□□ -0.07
SAMM50-201ENST00000350028 GHRLQ9UBU3 117 aa14.63□□□□□ -0.07
SAMM50-201ENST00000350028 ZNF69Q9UC07 566 aa14.63□□□□□ -0.07
SAMM50-201ENST00000350028 MGAT4AQ9UM21 535 aa14.63□□□□□ -0.07
SAMM50-201ENST00000350028 HSPB11Q9Y547 144 aa14.63□□□□□ -0.07
SAMM50-201ENST00000350028 CFAP54Q96N23 3096 aa14.63□□□□□ -0.07
SAMM50-201ENST00000350028 IGKV1-9A0A0C4DH69 117 aa14.63□□□□□ -0.07
SAMM50-201ENST00000350028 UBE2QL1A1L167 161 aa14.63□□□□□ -0.07
SAMM50-201ENST00000350028 RLN1P04808 185 aa14.63□□□□□ -0.07
SAMM50-201ENST00000350028 VSIG10L2P0DP72 767 aa14.63□□□□□ -0.07
SAMM50-201ENST00000350028 MEF2DQ14814 521 aa14.63□□□□□ -0.07
SAMM50-201ENST00000350028 CEACAM16Q2WEN9 425 aa14.63□□□□□ -0.07
SAMM50-201ENST00000350028 NLRC3Q7RTR2 1065 aa14.63□□□□□ -0.07
SAMM50-201ENST00000350028 PNLDC1Q8NA58 520 aaKnown RBP14.63□□□□□ -0.07
SAMM50-201ENST00000350028 C1orf147Q96MC9 270 aaPredicted RBP14.63□□□□□ -0.07
SAMM50-201ENST00000350028 SPACA5Q96QH8 159 aa14.63□□□□□ -0.07
SAMM50-201ENST00000350028 HES7Q9BYE0 225 aa14.63□□□□□ -0.07
SAMM50-201ENST00000350028 TTTY12Q9BZ98 90 aa14.63□□□□□ -0.07
SAMM50-201ENST00000350028 LPAR5Q9H1C0 372 aa14.63□□□□□ -0.07
SAMM50-201ENST00000350028 MGAT4CQ9UBM8 478 aa14.63□□□□□ -0.07
SAMM50-201ENST00000350028 KLK13Q9UKR3 277 aa14.63□□□□□ -0.07
SAMM50-201ENST00000350028 ELF5Q9UKW6 265 aaPredicted RBP14.63□□□□□ -0.07
SAMM50-201ENST00000350028 KLF13Q9Y2Y9 288 aaPredicted RBP14.63□□□□□ -0.07
SAMM50-201ENST00000350028 TIMM10BQ9Y5J6 103 aa14.63□□□□□ -0.07
SAMM50-201ENST00000350028 AKR7A2O43488 359 aa14.62□□□□□ -0.07
SAMM50-201ENST00000350028 ZNF780AO75290 641 aaPredicted RBP14.62□□□□□ -0.07
SAMM50-201ENST00000350028 SYNGR4O95473 234 aa14.62□□□□□ -0.07
SAMM50-201ENST00000350028 ITGB2P05107 769 aa14.62□□□□□ -0.07
SAMM50-201ENST00000350028 FCER2P06734 321 aa14.62□□□□□ -0.07
SAMM50-201ENST00000350028 DBHP09172 617 aa14.62□□□□□ -0.07
SAMM50-201ENST00000350028 DNASE1P24855 282 aa14.62□□□□□ -0.07
SAMM50-201ENST00000350028 CD82P27701 267 aa14.62□□□□□ -0.07
SAMM50-201ENST00000350028 ALDH3B1P43353 468 aa14.62□□□□□ -0.07
SAMM50-201ENST00000350028 OR3A4PP47883 348 aa14.62□□□□□ -0.07
SAMM50-201ENST00000350028 PLGLB1Q02325 96 aa14.62□□□□□ -0.07
SAMM50-201ENST00000350028 CSRP2Q16527 193 aa14.62□□□□□ -0.07
SAMM50-201ENST00000350028 RNF144BQ7Z419 303 aa14.62□□□□□ -0.07
SAMM50-201ENST00000350028 TRAPPC6BQ86SZ2 158 aa14.62□□□□□ -0.07
SAMM50-201ENST00000350028 SLC7A5P1Q8MH63 180 aa14.62□□□□□ -0.07
SAMM50-201ENST00000350028 ABHD3Q8WU67 409 aa14.62□□□□□ -0.07
SAMM50-201ENST00000350028 SGK3Q96BR1 496 aa14.62□□□□□ -0.07
SAMM50-201ENST00000350028 ALKBH3Q96Q83 286 aaPredicted RBP14.62□□□□□ -0.07
SAMM50-201ENST00000350028 LINC00470Q9BZP3 86 aa14.62□□□□□ -0.07
SAMM50-201ENST00000350028 EXO5Q9H790 373 aa14.62□□□□□ -0.07
SAMM50-201ENST00000350028 OR6C6A6NF89 314 aa14.61□□□□□ -0.07
SAMM50-201ENST00000350028 DHRS7CA6NNS2 312 aa14.61□□□□□ -0.07
SAMM50-201ENST00000350028 DISC1C4P0D8 188 aa14.61□□□□□ -0.07
SAMM50-201ENST00000350028 CDC14BO60729 498 aa14.61□□□□□ -0.07
SAMM50-201ENST00000350028 MPIG6BO95866 241 aa14.61□□□□□ -0.07
SAMM50-201ENST00000350028 AMY2AP04746 511 aa14.61□□□□□ -0.07
SAMM50-201ENST00000350028 SP1P08047 785 aa14.61□□□□□ -0.07
SAMM50-201ENST00000350028 GSTP1P09211 210 aaKnown RBP14.61□□□□□ -0.07
SAMM50-201ENST00000350028 ZNF735P0CB33 412 aa14.61□□□□□ -0.07
SAMM50-201ENST00000350028 ZNF32P17041 273 aa14.61□□□□□ -0.07
SAMM50-201ENST00000350028 CLDN18P56856 261 aa14.61□□□□□ -0.07
SAMM50-201ENST00000350028 STK11Q15831 433 aa14.61□□□□□ -0.07
SAMM50-201ENST00000350028 KRTAP27-1Q3LI81 207 aa14.61□□□□□ -0.07
SAMM50-201ENST00000350028 NRN1LQ496H8 165 aa14.61□□□□□ -0.07
SAMM50-201ENST00000350028 ZNF774Q6NX45 483 aa14.61□□□□□ -0.07
SAMM50-201ENST00000350028 CHMP1BQ7LBR1 199 aa14.61□□□□□ -0.07
SAMM50-201ENST00000350028 GALNT16Q8N428 558 aa14.61□□□□□ -0.07
SAMM50-201ENST00000350028 TMEM251Q8N6I4 163 aa14.61□□□□□ -0.07
SAMM50-201ENST00000350028 CCDC107Q8WV48 283 aa14.61□□□□□ -0.07
SAMM50-201ENST00000350028 CMBLQ96DG6 245 aa14.61□□□□□ -0.07
SAMM50-201ENST00000350028 URM1Q9BTM9 101 aaKnown RBP14.61□□□□□ -0.07
SAMM50-201ENST00000350028 SELENOIQ9C0D9 397 aa14.61□□□□□ -0.07
SAMM50-201ENST00000350028 TINAGL1Q9GZM7 467 aaPredicted RBP14.61□□□□□ -0.07
SAMM50-201ENST00000350028 CHST5Q9GZS9 411 aa14.61□□□□□ -0.07
SAMM50-201ENST00000350028 PARPBPQ9NWS1 579 aa14.61□□□□□ -0.07
SAMM50-201ENST00000350028 ZNF224Q9NZL3 707 aa14.61□□□□□ -0.07
SAMM50-201ENST00000350028 NOSIPQ9Y314 301 aaKnown RBP14.61□□□□□ -0.07
SAMM50-201ENST00000350028 FAM166BA8MTA8 275 aa14.61□□□□□ -0.07
SAMM50-201ENST00000350028 KLRC4-KLRK1H3BQV0 150 aa14.61□□□□□ -0.07
SAMM50-201ENST00000350028 M0QYG6 137 aa14.61□□□□□ -0.07
SAMM50-201ENST00000350028 CELA3AP09093 270 aa14.61□□□□□ -0.07
SAMM50-201ENST00000350028 GIPP09681 153 aaPredicted RBP14.61□□□□□ -0.07
SAMM50-201ENST00000350028 B4GALT1P15291 398 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms