RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 CDONQ4KMG0 1287 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 PYCR3Q53H96 274 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 ZFP82Q8N141 532 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 LHFPL5Q8TAF8 219 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 CHIAQ9BZP6 476 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 GLIPR2Q9H4G4 154 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.64□□□□□ -1.83
USH2A-201ENST00000307340 ZNF593O00488 134 aaPredicted RBP3.63□□□□□ -1.83
USH2A-201ENST00000307340 LANCL1O43813 399 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 DBHP09172 617 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 TPPP2P59282 170 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 CSNK1G2P78368 415 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 CLEC4CQ8WTT0 213 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 SMIM12Q96EX1 92 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 C2orf50Q96LR7 162 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 HRH3Q9Y5N1 445 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 OR5AC1P0C628 307 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 KRBOX4Q5JUW0 171 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 MARCH8Q5T0T0 291 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 RPUSD3Q6P087 351 aaKnown RBP3.63□□□□□ -1.83
USH2A-201ENST00000307340 BEND4Q6ZU67 534 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 LAX1Q8IWV1 398 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 SCLYQ96I15 445 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 GPR31O00270 319 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 ISLRO14498 428 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 OR2C1O95371 312 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 PPP1R3DO95685 299 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 FOLR1P15328 257 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 NTHL1P78549 312 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 GAMTQ14353 236 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 SLC10A1Q14973 349 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 IZUMO4Q1ZYL8 232 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 PHYHD1Q5SRE7 291 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 OR5D18Q8NGL1 313 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 AUTS2Q8WXX7 1259 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 SLC35E1Q96K37 410 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 TGIF2Q9GZN2 237 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.63□□□□□ -1.83
USH2A-201ENST00000307340 A0A1W2PQU0 124 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 C7orf72A4D263 438 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 SIGLEC6O43699 453 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 TRAF3IP2O43734 574 aaPredicted RBP3.63□□□□□ -1.83
USH2A-201ENST00000307340 NKX2-2O95096 273 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 PRKACAP17612 351 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 RPS4Y1P22090 263 aaKnown RBP3.63□□□□□ -1.83
USH2A-201ENST00000307340 FHITP49789 147 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 PAFAH1B2P68402 229 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 TRAPPC6BQ86SZ2 158 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 ZBTB44Q8NCP5 570 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 OR13C2Q8NGS9 318 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 ORAI1Q96D31 301 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 MS4A5Q9H3V2 200 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 DNMT3BQ9UBC3 853 aaKnown RBP3.63□□□□□ -1.83
USH2A-201ENST00000307340 TRGV10A0A0A0MS01 117 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 ARGFXA6NJG6 315 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 PLPP1O14494 284 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 EN2P19622 333 aaPredicted RBP3.63□□□□□ -1.83
USH2A-201ENST00000307340 MVDP53602 400 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 PLCXD3Q63HM9 321 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 RASL11AQ6T310 242 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 ASB16Q96NS5 453 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 VN1R3Q9BXE9 311 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 WNT16Q9UBV4 365 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 M0QYG6 137 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 DAPP51397 102 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 C20orf196Q8IYI0 205 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 HSD17B11Q8NBQ5 300 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 PLPP7Q8NBV4 271 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 NIPSNAP1Q9BPW8 284 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 PMCHL2Q9BQD1 86 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 TM7SF3Q9NS93 570 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 SEMA7AO75326 666 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 P2RY1P47900 373 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 DMWDQ09019 674 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 TM4SF18Q96CE8 201 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 ATG101Q9BSB4 218 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 ZBP1Q9H171 429 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 H7C1C5 153 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 FABP7O15540 132 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 VENTXO95231 258 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 ARSDP51689 593 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 BTNL3Q6UXE8 466 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 COX15Q7KZN9 410 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 SLC35G3Q8N808 338 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 SRRQ9GZT4 340 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 PARP11Q9NR21 331 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 LRIT1Q9P2V4 623 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 ZMAT5Q9UDW3 170 aaKnown RBP3.63□□□□□ -1.83
USH2A-201ENST00000307340 A0A0B4J2E0 115 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 A0A1B0GX12 115 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 CRYAAP02489 173 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 OPN1LWP04000 364 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 ACSM5Q6NUN0 579 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 ZADH2Q8N4Q0 377 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 SLAMF8Q9P0V8 285 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 C7orf66A4D0T2 115 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 CD8B2A6NJW9 211 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 MAS1P04201 325 aa3.63□□□□□ -1.83
USH2A-201ENST00000307340 HIST1H1EP10412 219 aaKnown RBP3.63□□□□□ -1.83
USH2A-201ENST00000307340 ACKR3P25106 362 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms