RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 IDH3GP51553 393 aaPredicted RBP14.23□□□□□ -0.13
PRPF40B-201ENST00000261897 ALG11Q2TAA5 492 aa14.23□□□□□ -0.13
PRPF40B-201ENST00000261897 WBP2NLQ6ICG8 309 aa14.23□□□□□ -0.13
PRPF40B-201ENST00000261897 ZNF283Q8N7M2 679 aa14.23□□□□□ -0.13
PRPF40B-201ENST00000261897 ARHGAP5-AS1Q96IT6 56 aa14.23□□□□□ -0.13
PRPF40B-201ENST00000261897 C2orf50Q96LR7 162 aa14.23□□□□□ -0.13
PRPF40B-201ENST00000261897 MMP25Q9NPA2 562 aa14.23□□□□□ -0.13
PRPF40B-201ENST00000261897 NXT1Q9UKK6 140 aaKnown RBP14.23□□□□□ -0.13
PRPF40B-201ENST00000261897 SLC7A11Q9UPY5 501 aa14.23□□□□□ -0.13
PRPF40B-201ENST00000261897 GAB2Q9UQC2 676 aa14.23□□□□□ -0.13
PRPF40B-201ENST00000261897 SPEGQ15772 3267 aa14.23□□□□□ -0.13
PRPF40B-201ENST00000261897 PHF3Q92576 2039 aaKnown RBP14.23□□□□□ -0.13
PRPF40B-201ENST00000261897 MFNGO00587 321 aa14.23□□□□□ -0.13
PRPF40B-201ENST00000261897 ARPC3O15145 178 aa14.23□□□□□ -0.13
PRPF40B-201ENST00000261897 CX3CR1P49238 355 aa14.23□□□□□ -0.13
PRPF40B-201ENST00000261897 POU3F1Q03052 451 aaPredicted RBP14.23□□□□□ -0.13
PRPF40B-201ENST00000261897 OGFOD3Q6PK18 319 aa14.23□□□□□ -0.13
PRPF40B-201ENST00000261897 ZNF610Q8N9Z0 462 aa14.23□□□□□ -0.13
PRPF40B-201ENST00000261897 MR1Q95460 341 aa14.23□□□□□ -0.13
PRPF40B-201ENST00000261897 WFIKKN1Q96NZ8 548 aa14.23□□□□□ -0.13
PRPF40B-201ENST00000261897 RNF208Q9H0X6 261 aa14.23□□□□□ -0.13
PRPF40B-201ENST00000261897 METTL1Q9UBP6 276 aaKnown RBP14.23□□□□□ -0.13
PRPF40B-201ENST00000261897 CCDC85CA6NKD9 419 aa14.22□□□□□ -0.13
PRPF40B-201ENST00000261897 B4DGG1 531 aa14.22□□□□□ -0.13
PRPF40B-201ENST00000261897 GP1BBP13224 206 aa14.22□□□□□ -0.13
PRPF40B-201ENST00000261897 CSF2RAP15509 400 aa14.22□□□□□ -0.13
PRPF40B-201ENST00000261897 AKT2P31751 481 aa14.22□□□□□ -0.13
PRPF40B-201ENST00000261897 IGFALSP35858 605 aa14.22□□□□□ -0.13
PRPF40B-201ENST00000261897 NXF5Q9H1B4 397 aaKnown RBP14.22□□□□□ -0.13
PRPF40B-201ENST00000261897 ASXL3Q9C0F0 2248 aa14.22□□□□□ -0.13
PRPF40B-201ENST00000261897 H0YIG0 161 aa14.22□□□□□ -0.13
PRPF40B-201ENST00000261897 H0YL77 283 aa14.22□□□□□ -0.13
PRPF40B-201ENST00000261897 RAB11AP62491 216 aa14.22□□□□□ -0.13
PRPF40B-201ENST00000261897 PDCD1Q15116 288 aa14.22□□□□□ -0.13
PRPF40B-201ENST00000261897 PRICKLE4Q2TBC4 344 aa14.22□□□□□ -0.13
PRPF40B-201ENST00000261897 SPNS3Q6ZMD2 512 aa14.22□□□□□ -0.13
PRPF40B-201ENST00000261897 CDC20BQ86Y33 519 aa14.22□□□□□ -0.13
PRPF40B-201ENST00000261897 BCORP1Q8N888 145 aa14.22□□□□□ -0.13
PRPF40B-201ENST00000261897 KLHDC3Q9BQ90 382 aa14.22□□□□□ -0.13
PRPF40B-201ENST00000261897 A0A1B0GTI1 187 aa14.22□□□□□ -0.13
PRPF40B-201ENST00000261897 KAT7O95251 611 aa14.22□□□□□ -0.13
PRPF40B-201ENST00000261897 IGHV2-70P01814 119 aa14.22□□□□□ -0.13
PRPF40B-201ENST00000261897 SNRPCP09234 159 aaKnown RBP14.22□□□□□ -0.13
PRPF40B-201ENST00000261897 CTSEP14091 401 aa14.22□□□□□ -0.13
PRPF40B-201ENST00000261897 DPTQ07507 201 aa14.22□□□□□ -0.13
PRPF40B-201ENST00000261897 FAM78AQ5JUQ0 283 aa14.22□□□□□ -0.13
PRPF40B-201ENST00000261897 FBXW12Q6X9E4 464 aa14.22□□□□□ -0.13
PRPF40B-201ENST00000261897 CACFD1Q9UGQ2 172 aa14.22□□□□□ -0.13
PRPF40B-201ENST00000261897 RAMP1O60894 148 aa14.21□□□□□ -0.13
PRPF40B-201ENST00000261897 LYPD3O95274 346 aa14.21□□□□□ -0.13
PRPF40B-201ENST00000261897 TMEM225BP0DP42 221 aa14.21□□□□□ -0.13
PRPF40B-201ENST00000261897 SSTP61278 116 aa14.21□□□□□ -0.13
PRPF40B-201ENST00000261897 NKAIN1Q4KMZ8 207 aa14.21□□□□□ -0.13
PRPF40B-201ENST00000261897 ZNF385CQ66K41 422 aaPredicted RBP14.21□□□□□ -0.13
PRPF40B-201ENST00000261897 NUP54Q7Z3B4 507 aa14.21□□□□□ -0.13
PRPF40B-201ENST00000261897 OR2G3Q8NGZ4 309 aa14.21□□□□□ -0.13
PRPF40B-201ENST00000261897 EDAQ92838 391 aa14.21□□□□□ -0.13
PRPF40B-201ENST00000261897 UTP23Q9BRU9 249 aaKnown RBP14.21□□□□□ -0.13
PRPF40B-201ENST00000261897 TREM2Q9NZC2 230 aa14.21□□□□□ -0.13
PRPF40B-201ENST00000261897 TGIF2-C20orf24A0A0A6YYL0 155 aa14.21□□□□□ -0.13
PRPF40B-201ENST00000261897 TRBV5-5A0A0J9YX44 114 aa14.21□□□□□ -0.13
PRPF40B-201ENST00000261897 A0A1W2PR80 420 aa14.21□□□□□ -0.13
PRPF40B-201ENST00000261897 ST8SIA5O15466 376 aa14.21□□□□□ -0.13
PRPF40B-201ENST00000261897 CST7O76096 145 aa14.21□□□□□ -0.13
PRPF40B-201ENST00000261897 F10P00742 488 aa14.21□□□□□ -0.13
PRPF40B-201ENST00000261897 SLC37A1P57057 533 aa14.21□□□□□ -0.13
PRPF40B-201ENST00000261897 VAMP2P63027 116 aa14.21□□□□□ -0.13
PRPF40B-201ENST00000261897 WFIKKN2Q8TEU8 576 aa14.21□□□□□ -0.13
PRPF40B-201ENST00000261897 SCGB3A2Q96PL1 93 aa14.21□□□□□ -0.13
PRPF40B-201ENST00000261897 C19orf12Q9NSK7 152 aa14.21□□□□□ -0.13
PRPF40B-201ENST00000261897 LRFN1Q9P244 771 aa14.21□□□□□ -0.13
PRPF40B-201ENST00000261897 DNAJB11Q9UBS4 358 aa14.21□□□□□ -0.13
PRPF40B-201ENST00000261897 ICAM5Q9UMF0 924 aa14.21□□□□□ -0.13
PRPF40B-201ENST00000261897 KIF26AQ9ULI4 1882 aaPredicted RBP14.21□□□□□ -0.13
PRPF40B-201ENST00000261897 PMS2P1A4D2B8 440 aa14.21□□□□□ -0.14
PRPF40B-201ENST00000261897 C17orf105B2RV13 164 aa14.21□□□□□ -0.14
PRPF40B-201ENST00000261897 ZNF264O43296 627 aa14.21□□□□□ -0.14
PRPF40B-201ENST00000261897 JTBO76095 146 aa14.21□□□□□ -0.14
PRPF40B-201ENST00000261897 CSTBP04080 98 aaKnown RBP14.21□□□□□ -0.14
PRPF40B-201ENST00000261897 CEACAM5P06731 702 aa14.21□□□□□ -0.14
PRPF40B-201ENST00000261897 GUCA1AP43080 201 aaPredicted RBP14.21□□□□□ -0.14
PRPF40B-201ENST00000261897 RSPO4Q2I0M5 234 aaPredicted RBP14.21□□□□□ -0.14
PRPF40B-201ENST00000261897 UNQ6494/PRO21346Q6UXR6 183 aa14.21□□□□□ -0.14
PRPF40B-201ENST00000261897 MAMDC2Q7Z304 686 aaPredicted RBP14.21□□□□□ -0.14
PRPF40B-201ENST00000261897 OR5D14Q8NGL3 314 aa14.21□□□□□ -0.14
PRPF40B-201ENST00000261897 ERGIC1Q969X5 290 aa14.21□□□□□ -0.14
PRPF40B-201ENST00000261897 STACQ99469 402 aa14.21□□□□□ -0.14
PRPF40B-201ENST00000261897 ZNF2Q9BSG1 426 aaPredicted RBP14.21□□□□□ -0.14
PRPF40B-201ENST00000261897 APOOQ9BUR5 198 aa14.21□□□□□ -0.14
PRPF40B-201ENST00000261897 OR10A5Q9H207 317 aa14.21□□□□□ -0.14
PRPF40B-201ENST00000261897 LIPGQ9Y5X9 500 aa14.21□□□□□ -0.14
PRPF40B-201ENST00000261897 RANBP2P49792 3224 aaKnown RBP14.2□□□□□ -0.14
PRPF40B-201ENST00000261897 F5H5K5 113 aa14.2□□□□□ -0.14
PRPF40B-201ENST00000261897 CD79AP11912 226 aa14.2□□□□□ -0.14
PRPF40B-201ENST00000261897 COL19A1Q14993 1142 aa14.2□□□□□ -0.14
PRPF40B-201ENST00000261897 ADAMTSL4Q6UY14 1074 aa14.2□□□□□ -0.14
PRPF40B-201ENST00000261897 SLC2A8Q9NY64 477 aa14.2□□□□□ -0.14
PRPF40B-201ENST00000261897 KCNIP3Q9Y2W7 256 aa14.2□□□□□ -0.14
PRPF40B-201ENST00000261897 DMRT1Q9Y5R6 373 aa14.2□□□□□ -0.14
PRPF40B-201ENST00000261897 H3BP45 60 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 180 ms