RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 WDR38Q5JTN6 314 aa9.15□□□□□ -0.94
NPIPB3-210ENST00000542817 MBNL2Q5VZF2 373 aaKnown RBP9.15□□□□□ -0.94
NPIPB3-210ENST00000542817 ZNF773Q6PK81 442 aa9.15□□□□□ -0.94
NPIPB3-210ENST00000542817 FAM57BQ71RH2 274 aa9.15□□□□□ -0.94
NPIPB3-210ENST00000542817 ELMOD2Q8IZ81 293 aa9.15□□□□□ -0.94
NPIPB3-210ENST00000542817 ZNF283Q8N7M2 679 aa9.15□□□□□ -0.94
NPIPB3-210ENST00000542817 YIPF7Q8N8F6 280 aa9.15□□□□□ -0.94
NPIPB3-210ENST00000542817 OR1J1Q8NGS3 322 aa9.15□□□□□ -0.94
NPIPB3-210ENST00000542817 OR2AE1Q8NHA4 323 aa9.15□□□□□ -0.94
NPIPB3-210ENST00000542817 TBC1D15Q8TC07 691 aa9.15□□□□□ -0.94
NPIPB3-210ENST00000542817 KLF14Q8TD94 323 aaPredicted RBP9.15□□□□□ -0.94
NPIPB3-210ENST00000542817 RGP1Q92546 391 aaPredicted RBP9.15□□□□□ -0.94
NPIPB3-210ENST00000542817 APOBEC3DQ96AK3 386 aaPredicted RBP9.15□□□□□ -0.94
NPIPB3-210ENST00000542817 REPIN1Q9BWE0 567 aaKnown RBP9.15□□□□□ -0.94
NPIPB3-210ENST00000542817 CLEC4MQ9H2X3 399 aaPredicted RBP9.15□□□□□ -0.94
NPIPB3-210ENST00000542817 LIME1Q9H400 295 aa9.15□□□□□ -0.94
NPIPB3-210ENST00000542817 BRD7Q9NPI1 651 aa9.15□□□□□ -0.94
NPIPB3-210ENST00000542817 ACOT13Q9NPJ3 140 aa9.15□□□□□ -0.94
NPIPB3-210ENST00000542817 BABAM2Q9NXR7 383 aa9.15□□□□□ -0.94
NPIPB3-210ENST00000542817 CISD1Q9NZ45 108 aaKnown RBP9.15□□□□□ -0.94
NPIPB3-210ENST00000542817 NUFIP1Q9UHK0 495 aaKnown RBP9.15□□□□□ -0.94
NPIPB3-210ENST00000542817 FZR1Q9UM11 496 aa9.15□□□□□ -0.94
NPIPB3-210ENST00000542817 ATP23Q9Y6H3 246 aa9.15□□□□□ -0.94
NPIPB3-210ENST00000542817 CACNA1DQ01668 2161 aa9.15□□□□□ -0.94
NPIPB3-210ENST00000542817 OTOGQ6ZRI0 2925 aa9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 ARFGEF3Q5TH69 2177 aa9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 USF3Q68DE3 2245 aa9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 hCG_2014768A0A024R1R8 64 aa9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 hCG_38984A0A1B0GV85 526 aa9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 ACOD1A6NK06 481 aa9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 HS3ST1O14792 307 aa9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 MRPS14O60783 128 aaKnown RBP9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 MT-ND5P03915 603 aa9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 LCKP06239 509 aa9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 ANXA2P07355 339 aaKnown RBP9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 OCM2P0CE71 109 aa9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 OCMP0CE72 109 aaPredicted RBP9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 MYL12AP19105 171 aa9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 HSD11B1P28845 292 aa9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 RAD52P43351 418 aa9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 SLC6A9P48067 706 aa9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 TGM4P49221 684 aa9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 RGS6P49758 472 aa9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 FAM3AP98173 230 aa9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 ACSM1Q08AH1 577 aa9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 TBCEQ15813 527 aaPredicted RBP9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 NDUFA5Q16718 116 aa9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 SWI5Q1ZZU3 235 aa9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 DMKNQ6E0U4 476 aaPredicted RBP9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 C11orf71Q6IPW1 123 aa9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 FBXW12Q6X9E4 464 aa9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 KRT74Q7RTS7 529 aa9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 KLBQ86Z14 1044 aa9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 RDH10Q8IZV5 341 aa9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 KLHL36Q8N4N3 616 aa9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 PLPP7Q8NBV4 271 aa9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 OR10AC1Q8NH08 325 aa9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 NRGNQ92686 78 aa9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 MRPL24Q96A35 216 aaKnown RBP9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 TMIGD2Q96BF3 282 aa9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 CMBLQ96DG6 245 aa9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 PGLYRP3Q96LB9 341 aa9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 DHRS9Q9BPW9 319 aa9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 BCL7BQ9BQE9 202 aa9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 NEURL2Q9BR09 285 aa9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 MRPL37Q9BZE1 423 aaKnown RBP9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 BCL2L14Q9BZR8 327 aa9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 PTTG3PQ9NZH4 202 aa9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 EIF3KQ9UBQ5 218 aaKnown RBP9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 OR52A1Q9UKL2 312 aa9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 ERGIC3Q9Y282 383 aa9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 SNX5Q9Y5X3 404 aa9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 CCDC168Q8NDH2 2452 aa9.14□□□□□ -0.95
NPIPB3-210ENST00000542817 CELSR1Q9NYQ6 3014 aa9.13□□□□□ -0.95
NPIPB3-210ENST00000542817 ANKRD17O75179 2603 aaKnown RBP9.13□□□□□ -0.95
NPIPB3-210ENST00000542817 A0A0U1RQV5 110 aa9.13□□□□□ -0.95
NPIPB3-210ENST00000542817 A0A1B0GWJ7 208 aa9.13□□□□□ -0.95
NPIPB3-210ENST00000542817 LOC110117498-PIK3R3F6TDL0 507 aa9.13□□□□□ -0.95
NPIPB3-210ENST00000542817 MAGEB3O15480 346 aa9.13□□□□□ -0.95
NPIPB3-210ENST00000542817 ZFPL1O95159 310 aa9.13□□□□□ -0.95
NPIPB3-210ENST00000542817 IGHV3-13P01766 116 aa9.13□□□□□ -0.95
NPIPB3-210ENST00000542817 TACSTD2P09758 323 aa9.13□□□□□ -0.95
NPIPB3-210ENST00000542817 OR4A8P0C604 315 aa9.13□□□□□ -0.95
NPIPB3-210ENST00000542817 KITLGP21583 273 aa9.13□□□□□ -0.95
NPIPB3-210ENST00000542817 CCL1P22362 96 aa9.13□□□□□ -0.95
NPIPB3-210ENST00000542817 ACKR3P25106 362 aa9.13□□□□□ -0.95
NPIPB3-210ENST00000542817 FABP6P51161 128 aa9.13□□□□□ -0.95
NPIPB3-210ENST00000542817 MMP15P51511 669 aa9.13□□□□□ -0.95
NPIPB3-210ENST00000542817 CCR9P51686 369 aa9.13□□□□□ -0.95
NPIPB3-210ENST00000542817 WNT4P56705 351 aa9.13□□□□□ -0.95
NPIPB3-210ENST00000542817 RPS11P62280 158 aaKnown RBP eCLIP9.13□□□□□ -0.95
NPIPB3-210ENST00000542817 ALKBH1Q13686 389 aaKnown RBP9.13□□□□□ -0.95
NPIPB3-210ENST00000542817 CDK5R1Q15078 307 aa9.13□□□□□ -0.95
NPIPB3-210ENST00000542817 EFNB3Q15768 340 aa9.13□□□□□ -0.95
NPIPB3-210ENST00000542817 VHLLQ6RSH7 139 aa9.13□□□□□ -0.95
NPIPB3-210ENST00000542817 Q6ZR03 302 aa9.13□□□□□ -0.95
NPIPB3-210ENST00000542817 DTX2Q86UW9 622 aa9.13□□□□□ -0.95
NPIPB3-210ENST00000542817 CLVS1Q8IUQ0 354 aaPredicted RBP9.13□□□□□ -0.95
NPIPB3-210ENST00000542817 CENPSQ8N2Z9 138 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms