RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 SRP9P49458 86 aaKnown RBP12.75□□□□□ -0.37
RNF4-210ENST00000508235 TMEM33P57088 247 aa12.75□□□□□ -0.37
RNF4-210ENST00000508235 ZNF91Q05481 1191 aa12.75□□□□□ -0.37
RNF4-210ENST00000508235 RAB40BQ12829 278 aa12.75□□□□□ -0.37
RNF4-210ENST00000508235 HFEQ30201 348 aa12.75□□□□□ -0.37
RNF4-210ENST00000508235 KLHL22Q53GT1 634 aa12.75□□□□□ -0.37
RNF4-210ENST00000508235 FAM220AQ7Z4H9 259 aa12.75□□□□□ -0.37
RNF4-210ENST00000508235 KCTD20Q7Z5Y7 419 aa12.75□□□□□ -0.37
RNF4-210ENST00000508235 C8orf59Q8N0T1 100 aaPredicted RBP12.75□□□□□ -0.37
RNF4-210ENST00000508235 ACBD7Q8N6N7 88 aa12.75□□□□□ -0.37
RNF4-210ENST00000508235 YIPF7Q8N8F6 280 aa12.75□□□□□ -0.37
RNF4-210ENST00000508235 CSNK2A3Q8NEV1 391 aa12.75□□□□□ -0.37
RNF4-210ENST00000508235 SGK3Q96BR1 496 aa12.75□□□□□ -0.37
RNF4-210ENST00000508235 FAM206AQ9NX38 181 aa12.75□□□□□ -0.37
RNF4-210ENST00000508235 EXOGQ9Y2C4 368 aaKnown RBP12.75□□□□□ -0.37
RNF4-210ENST00000508235 TANC2Q9HCD6 1990 aa12.74□□□□□ -0.37
RNF4-210ENST00000508235 A0A0U1RQV5 110 aa12.74□□□□□ -0.37
RNF4-210ENST00000508235 hCG_38984A0A1B0GV85 526 aa12.74□□□□□ -0.37
RNF4-210ENST00000508235 A0A1B0GWJ7 208 aa12.74□□□□□ -0.37
RNF4-210ENST00000508235 IRGMA1A4Y4 181 aa12.74□□□□□ -0.37
RNF4-210ENST00000508235 METTL15A6NJ78 407 aa12.74□□□□□ -0.37
RNF4-210ENST00000508235 ANKRD30BLA7E2S9 258 aa12.74□□□□□ -0.37
RNF4-210ENST00000508235 PRR32B1ATL7 298 aa12.74□□□□□ -0.37
RNF4-210ENST00000508235 VWC2LB2RUY7 222 aa12.74□□□□□ -0.37
RNF4-210ENST00000508235 LOC110117498-PIK3R3F6TDL0 507 aa12.74□□□□□ -0.37
RNF4-210ENST00000508235 GMDSO60547 372 aa12.74□□□□□ -0.37
RNF4-210ENST00000508235 TACSTD2P09758 323 aa12.74□□□□□ -0.37
RNF4-210ENST00000508235 NR4A2P43354 598 aa12.74□□□□□ -0.37
RNF4-210ENST00000508235 ACTA2P62736 377 aa12.74□□□□□ -0.37
RNF4-210ENST00000508235 ACTG2P63267 376 aa12.74□□□□□ -0.37
RNF4-210ENST00000508235 FAM3AP98173 230 aa12.74□□□□□ -0.37
RNF4-210ENST00000508235 SLC3A1Q07837 685 aa12.74□□□□□ -0.37
RNF4-210ENST00000508235 MZT1Q08AG7 82 aa12.74□□□□□ -0.37
RNF4-210ENST00000508235 RIN1Q13671 783 aa12.74□□□□□ -0.37
RNF4-210ENST00000508235 GFOD2Q3B7J2 385 aa12.74□□□□□ -0.37
RNF4-210ENST00000508235 BIVMQ86UB2 503 aa12.74□□□□□ -0.37
RNF4-210ENST00000508235 KLBQ86Z14 1044 aa12.74□□□□□ -0.37
RNF4-210ENST00000508235 EGFL6Q8IUX8 553 aa12.74□□□□□ -0.37
RNF4-210ENST00000508235 RFLNBQ8N5W9 214 aa12.74□□□□□ -0.37
RNF4-210ENST00000508235 OR8B12Q8NGG6 310 aa12.74□□□□□ -0.37
RNF4-210ENST00000508235 INPP5EQ9NRR6 644 aa12.74□□□□□ -0.37
RNF4-210ENST00000508235 MRPS18AQ9NVS2 196 aaKnown RBP12.74□□□□□ -0.37
RNF4-210ENST00000508235 AASSQ9UDR5 926 aa12.74□□□□□ -0.37
RNF4-210ENST00000508235 NUFIP1Q9UHK0 495 aaKnown RBP12.74□□□□□ -0.37
RNF4-210ENST00000508235 MRM2Q9UI43 246 aaKnown RBP12.74□□□□□ -0.37
RNF4-210ENST00000508235 SNX5Q9Y5X3 404 aa12.74□□□□□ -0.37
RNF4-210ENST00000508235 R4GMQ9 66 aa12.74□□□□□ -0.37
RNF4-210ENST00000508235 MED13LQ71F56 2210 aa12.74□□□□□ -0.37
RNF4-210ENST00000508235 OTOGQ6ZRI0 2925 aa12.74□□□□□ -0.37
RNF4-210ENST00000508235 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.73□□□□□ -0.37
RNF4-210ENST00000508235 C5orf63A6NC05 138 aa12.73□□□□□ -0.37
RNF4-210ENST00000508235 J3QRE1 110 aa12.73□□□□□ -0.37
RNF4-210ENST00000508235 IFNL4K9M1U5 179 aa12.73□□□□□ -0.37
RNF4-210ENST00000508235 SMAD7O15105 426 aaKnown RBP12.73□□□□□ -0.37
RNF4-210ENST00000508235 CDC14BO60729 498 aa12.73□□□□□ -0.37
RNF4-210ENST00000508235 MTRF1O75570 445 aaKnown RBP12.73□□□□□ -0.37
RNF4-210ENST00000508235 CLIC3O95833 236 aa12.73□□□□□ -0.37
RNF4-210ENST00000508235 ATP6V1B1P15313 513 aa12.73□□□□□ -0.37
RNF4-210ENST00000508235 USF1P22415 310 aaPredicted RBP12.73□□□□□ -0.37
RNF4-210ENST00000508235 COL8A2P25067 703 aa12.73□□□□□ -0.37
RNF4-210ENST00000508235 ISL1P61371 349 aa12.73□□□□□ -0.37
RNF4-210ENST00000508235 ZNF85Q03923 595 aa12.73□□□□□ -0.37
RNF4-210ENST00000508235 LOXL1Q08397 574 aaPredicted RBP12.73□□□□□ -0.37
RNF4-210ENST00000508235 OR8G1Q15617 311 aa12.73□□□□□ -0.37
RNF4-210ENST00000508235 ZNF684Q5T5D7 378 aa12.73□□□□□ -0.37
RNF4-210ENST00000508235 SSX6Q7RTT6 188 aa12.73□□□□□ -0.37
RNF4-210ENST00000508235 COMMD2Q86X83 199 aa12.73□□□□□ -0.37
RNF4-210ENST00000508235 CELF2-AS1Q8N7Q2 184 aa12.73□□□□□ -0.37
RNF4-210ENST00000508235 SPERTQ8NA61 448 aa12.73□□□□□ -0.37
RNF4-210ENST00000508235 OR56B2PQ8NGI1 322 aa12.73□□□□□ -0.37
RNF4-210ENST00000508235 APH1BQ8WW43 257 aa12.73□□□□□ -0.37
RNF4-210ENST00000508235 NRG4Q8WWG1 115 aa12.73□□□□□ -0.37
RNF4-210ENST00000508235 YIPF5Q969M3 257 aa12.73□□□□□ -0.37
RNF4-210ENST00000508235 LGALS12Q96DT0 336 aa12.73□□□□□ -0.37
RNF4-210ENST00000508235 TIMD4Q96H15 378 aa12.73□□□□□ -0.37
RNF4-210ENST00000508235 BPESC1Q9GZL8 116 aa12.73□□□□□ -0.37
RNF4-210ENST00000508235 PBOV1Q9GZY1 135 aa12.73□□□□□ -0.37
RNF4-210ENST00000508235 ZNF275Q9NSD4 429 aaPredicted RBP12.73□□□□□ -0.37
RNF4-210ENST00000508235 ZNF319Q9P2F9 582 aa12.73□□□□□ -0.37
RNF4-210ENST00000508235 GTF2A1LQ9UNN4 478 aa12.73□□□□□ -0.37
RNF4-210ENST00000508235 CLDN25C9JDP6 229 aa12.72□□□□□ -0.37
RNF4-210ENST00000508235 SRSF10O75494 262 aaKnown RBP12.72□□□□□ -0.37
RNF4-210ENST00000508235 WBP4O75554 376 aaKnown RBP12.72□□□□□ -0.37
RNF4-210ENST00000508235 RP2O75695 350 aa12.72□□□□□ -0.37
RNF4-210ENST00000508235 ATP6V1G2O95670 118 aa12.72□□□□□ -0.37
RNF4-210ENST00000508235 ANOS1P23352 680 aa12.72□□□□□ -0.37
RNF4-210ENST00000508235 GNALP38405 381 aa12.72□□□□□ -0.37
RNF4-210ENST00000508235 GPR6P46095 362 aaPredicted RBP12.72□□□□□ -0.37
RNF4-210ENST00000508235 HSPA13P48723 471 aa12.72□□□□□ -0.37
RNF4-210ENST00000508235 GSK3AP49840 483 aa12.72□□□□□ -0.37
RNF4-210ENST00000508235 PRSS12P56730 875 aa12.72□□□□□ -0.37
RNF4-210ENST00000508235 OR8B8Q15620 311 aa12.72□□□□□ -0.37
RNF4-210ENST00000508235 BCL2L15Q5TBC7 163 aa12.72□□□□□ -0.37
RNF4-210ENST00000508235 LIPNQ5VXI9 398 aa12.72□□□□□ -0.37
RNF4-210ENST00000508235 PEG10Q86TG7 708 aaKnown RBP12.72□□□□□ -0.37
RNF4-210ENST00000508235 CIARTQ8N365 385 aaPredicted RBP12.72□□□□□ -0.37
RNF4-210ENST00000508235 OR10AD1Q8NGE0 317 aa12.72□□□□□ -0.37
RNF4-210ENST00000508235 CNIH3Q8TBE1 160 aa12.72□□□□□ -0.37
RNF4-210ENST00000508235 CCL17Q92583 94 aa12.72□□□□□ -0.37
RNF4-210ENST00000508235 TFAP2CQ92754 450 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms