RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 MRPL22Q9NWU5 206 aaKnown RBP11.25□□□□□ -0.61
SAMM50-204ENST00000493161 ZNRD1Q9P1U0 126 aa11.25□□□□□ -0.61
SAMM50-204ENST00000493161 ONECUT1Q9UBC0 465 aa11.25□□□□□ -0.61
SAMM50-204ENST00000493161 CYB5R1Q9UHQ9 305 aa11.25□□□□□ -0.61
SAMM50-204ENST00000493161 VPREB3Q9UKI3 123 aa11.25□□□□□ -0.61
SAMM50-204ENST00000493161 FAM96BQ9Y3D0 163 aa11.25□□□□□ -0.61
SAMM50-204ENST00000493161 A0A1W2PRQ8 180 aa11.24□□□□□ -0.61
SAMM50-204ENST00000493161 OR6C68A6NDL8 312 aa11.24□□□□□ -0.61
SAMM50-204ENST00000493161 GGT3PA6NGU5 568 aa11.24□□□□□ -0.61
SAMM50-204ENST00000493161 A6NLC8 198 aa11.24□□□□□ -0.61
SAMM50-204ENST00000493161 RNASEK-C17orf49H0YIS7 233 aa11.24□□□□□ -0.61
SAMM50-204ENST00000493161 M0R135 149 aa11.24□□□□□ -0.61
SAMM50-204ENST00000493161 NDUFA2O43678 99 aa11.24□□□□□ -0.61
SAMM50-204ENST00000493161 DIRAS1O95057 198 aa11.24□□□□□ -0.61
SAMM50-204ENST00000493161 H1F0P07305 194 aaKnown RBP11.24□□□□□ -0.61
SAMM50-204ENST00000493161 NCK1P16333 377 aa11.24□□□□□ -0.61
SAMM50-204ENST00000493161 HIST1H1CP16403 213 aaKnown RBP11.24□□□□□ -0.61
SAMM50-204ENST00000493161 ECH1Q13011 328 aa11.24□□□□□ -0.61
SAMM50-204ENST00000493161 KLRD1Q13241 179 aa11.24□□□□□ -0.61
SAMM50-204ENST00000493161 DGCR6Q14129 220 aa11.24□□□□□ -0.61
SAMM50-204ENST00000493161 SAMD5Q5TGI4 173 aa11.24□□□□□ -0.61
SAMM50-204ENST00000493161 TEX36Q5VZQ5 186 aa11.24□□□□□ -0.61
SAMM50-204ENST00000493161 SMARCD3Q6STE5 483 aa11.24□□□□□ -0.61
SAMM50-204ENST00000493161 WDR86Q86TI4 376 aa11.24□□□□□ -0.61
SAMM50-204ENST00000493161 ZBTB46Q86UZ6 589 aa11.24□□□□□ -0.61
SAMM50-204ENST00000493161 C11orf53Q8IXP5 236 aa11.24□□□□□ -0.61
SAMM50-204ENST00000493161 LNX2Q8N448 690 aa11.24□□□□□ -0.61
SAMM50-204ENST00000493161 Q8N7P7 452 aa11.24□□□□□ -0.61
SAMM50-204ENST00000493161 PLPP7Q8NBV4 271 aa11.24□□□□□ -0.61
SAMM50-204ENST00000493161 LY6G5BQ8NDX9 201 aa11.24□□□□□ -0.61
SAMM50-204ENST00000493161 OR2AJ1Q8NGZ0 328 aa11.24□□□□□ -0.61
SAMM50-204ENST00000493161 OR52J3Q8NH60 311 aa11.24□□□□□ -0.61
SAMM50-204ENST00000493161 ZNF799Q96GE5 643 aa11.24□□□□□ -0.61
SAMM50-204ENST00000493161 FUZQ9BT04 418 aa11.24□□□□□ -0.61
SAMM50-204ENST00000493161 NDUFAF4Q9P032 175 aa11.24□□□□□ -0.61
SAMM50-204ENST00000493161 KAAG1Q9UBP8 84 aa11.24□□□□□ -0.61
SAMM50-204ENST00000493161 KPTNQ9Y664 436 aa11.24□□□□□ -0.61
SAMM50-204ENST00000493161 A0A1B0GVI7 797 aa11.23□□□□□ -0.61
SAMM50-204ENST00000493161 hCG_1807616A0A1W2PRN6 198 aa11.23□□□□□ -0.61
SAMM50-204ENST00000493161 NME4O00746 187 aa11.23□□□□□ -0.61
SAMM50-204ENST00000493161 GSTA4O15217 222 aa11.23□□□□□ -0.61
SAMM50-204ENST00000493161 ALX3O95076 343 aa11.23□□□□□ -0.61
SAMM50-204ENST00000493161 ECDO95905 644 aaPredicted RBP11.23□□□□□ -0.61
SAMM50-204ENST00000493161 TPTEP56180 551 aa11.23□□□□□ -0.61
SAMM50-204ENST00000493161 MAPRE2Q15555 327 aa11.23□□□□□ -0.61
SAMM50-204ENST00000493161 PCK2Q16822 640 aa11.23□□□□□ -0.61
SAMM50-204ENST00000493161 RFX4Q33E94 735 aa11.23□□□□□ -0.61
SAMM50-204ENST00000493161 KPRPQ5T749 579 aaPredicted RBP11.23□□□□□ -0.61
SAMM50-204ENST00000493161 CGB2Q6NT52 195 aa11.23□□□□□ -0.61
SAMM50-204ENST00000493161 LYPD4Q6UWN0 246 aa11.23□□□□□ -0.61
SAMM50-204ENST00000493161 CYP4Z1Q86W10 505 aa11.23□□□□□ -0.61
SAMM50-204ENST00000493161 FAM216BQ8N7L0 139 aa11.23□□□□□ -0.61
SAMM50-204ENST00000493161 FAM86B1Q8N7N1 296 aa11.23□□□□□ -0.61
SAMM50-204ENST00000493161 C11orf44Q8N8P7 122 aa11.23□□□□□ -0.61
SAMM50-204ENST00000493161 PPP1R35Q8TAP8 253 aa11.23□□□□□ -0.61
SAMM50-204ENST00000493161 ZNRF4Q8WWF5 429 aa11.23□□□□□ -0.61
SAMM50-204ENST00000493161 LRTOMTQ8WZ04 291 aa11.23□□□□□ -0.61
SAMM50-204ENST00000493161 SLC22A4Q9H015 551 aa11.23□□□□□ -0.61
SAMM50-204ENST00000493161 PPA2Q9H2U2 334 aa11.23□□□□□ -0.61
SAMM50-204ENST00000493161 PPP1R3EQ9H7J1 279 aa11.23□□□□□ -0.61
SAMM50-204ENST00000493161 TRIM36Q9NQ86 728 aa11.23□□□□□ -0.61
SAMM50-204ENST00000493161 AURKCQ9UQB9 309 aa11.23□□□□□ -0.61
SAMM50-204ENST00000493161 TET2Q6N021 2002 aaPredicted RBP11.23□□□□□ -0.61
SAMM50-204ENST00000493161 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.22□□□□□ -0.61
SAMM50-204ENST00000493161 NPFFO15130 113 aa11.22□□□□□ -0.61
SAMM50-204ENST00000493161 RENP00797 406 aa11.22□□□□□ -0.61
SAMM50-204ENST00000493161 HLA-DQA2P01906 255 aa11.22□□□□□ -0.61
SAMM50-204ENST00000493161 OPN1MWP04001 364 aa11.22□□□□□ -0.61
SAMM50-204ENST00000493161 TFF1P04155 84 aa11.22□□□□□ -0.61
SAMM50-204ENST00000493161 FBP1P09467 338 aa11.22□□□□□ -0.61
SAMM50-204ENST00000493161 OPN1MW2P0DN77 364 aa11.22□□□□□ -0.61
SAMM50-204ENST00000493161 OPN1MW3P0DN78 364 aa11.22□□□□□ -0.61
SAMM50-204ENST00000493161 TROVE2P10155 538 aaKnown RBP eCLIP11.22□□□□□ -0.61
SAMM50-204ENST00000493161 SLC2A1P11166 492 aa11.22□□□□□ -0.61
SAMM50-204ENST00000493161 SELLP14151 372 aa11.22□□□□□ -0.61
SAMM50-204ENST00000493161 AMY2BP19961 511 aa11.22□□□□□ -0.61
SAMM50-204ENST00000493161 TGFBR2P37173 567 aa11.22□□□□□ -0.61
SAMM50-204ENST00000493161 GSK3BP49841 420 aa11.22□□□□□ -0.61
SAMM50-204ENST00000493161 SLC7A2P52569 658 aa11.22□□□□□ -0.61
SAMM50-204ENST00000493161 FAM189A2Q15884 450 aa11.22□□□□□ -0.61
SAMM50-204ENST00000493161 SLC36A3Q495N2 470 aa11.22□□□□□ -0.61
SAMM50-204ENST00000493161 WDR38Q5JTN6 314 aa11.22□□□□□ -0.61
SAMM50-204ENST00000493161 C1orf122Q6ZSJ8 110 aa11.22□□□□□ -0.61
SAMM50-204ENST00000493161 SDR9C7Q8NEX9 313 aa11.22□□□□□ -0.61
SAMM50-204ENST00000493161 KMT2CQ8NEZ4 4911 aaKnown RBP11.22□□□□□ -0.61
SAMM50-204ENST00000493161 OR56B2PQ8NGI1 322 aa11.22□□□□□ -0.61
SAMM50-204ENST00000493161 FANK1Q8TC84 345 aa11.22□□□□□ -0.61
SAMM50-204ENST00000493161 LRRC29Q8WV35 223 aa11.22□□□□□ -0.61
SAMM50-204ENST00000493161 OR52D1Q9H346 318 aa11.22□□□□□ -0.61
SAMM50-204ENST00000493161 MRPL15Q9P015 296 aaKnown RBP11.22□□□□□ -0.61
SAMM50-204ENST00000493161 FOXJ3Q9UPW0 622 aa11.22□□□□□ -0.61
SAMM50-204ENST00000493161 NOP16Q9Y3C1 178 aaKnown RBP11.22□□□□□ -0.61
SAMM50-204ENST00000493161 N6AMT1Q9Y5N5 214 aa11.22□□□□□ -0.61
SAMM50-204ENST00000493161 TVP23AA6NH52 213 aa11.21□□□□□ -0.61
SAMM50-204ENST00000493161 BHLHE40O14503 412 aa11.21□□□□□ -0.61
SAMM50-204ENST00000493161 ACOT8O14734 319 aa11.21□□□□□ -0.61
SAMM50-204ENST00000493161 ARPC3O15145 178 aa11.21□□□□□ -0.61
SAMM50-204ENST00000493161 PIN1P1O15428 100 aa11.21□□□□□ -0.61
SAMM50-204ENST00000493161 OTX1P32242 354 aaPredicted RBP11.21□□□□□ -0.61
SAMM50-204ENST00000493161 PYCR1P32322 319 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms