RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 PSMC3IPQ9P2W1 217 aaPredicted RBP0.5□□□□□ -2.33
CCDC93-209ENST00000488908 RWDD2AQ9UIY3 292 aa0.5□□□□□ -2.33
CCDC93-209ENST00000488908 STARD10Q9Y365 291 aa0.5□□□□□ -2.33
CCDC93-209ENST00000488908 ZNF337Q9Y3M9 751 aa0.5□□□□□ -2.33
CCDC93-209ENST00000488908 SLC22A7Q9Y694 548 aa0.5□□□□□ -2.33
CCDC93-209ENST00000488908 RPRD2Q5VT52 1461 aaKnown RBP0.49□□□□□ -2.33
CCDC93-209ENST00000488908 SPATA31E1Q6ZUB1 1445 aa0.49□□□□□ -2.33
CCDC93-209ENST00000488908 XKRY2A2RUG3 117 aa0.49□□□□□ -2.33
CCDC93-209ENST00000488908 ISPDA4D126 451 aa0.49□□□□□ -2.33
CCDC93-209ENST00000488908 PSCAO43653 123 aa0.49□□□□□ -2.33
CCDC93-209ENST00000488908 ZNF73O43830 326 aaPredicted RBP0.49□□□□□ -2.33
CCDC93-209ENST00000488908 RAD1O60671 282 aa0.49□□□□□ -2.33
CCDC93-209ENST00000488908 SPAG6O75602 509 aa0.49□□□□□ -2.33
CCDC93-209ENST00000488908 IL1BP01584 269 aa0.49□□□□□ -2.33
CCDC93-209ENST00000488908 IGHG2P01859 326 aa0.49□□□□□ -2.33
CCDC93-209ENST00000488908 SERPINE2P07093 398 aa0.49□□□□□ -2.33
CCDC93-209ENST00000488908 CTRB1P17538 263 aa0.49□□□□□ -2.33
CCDC93-209ENST00000488908 MYL9P24844 172 aa0.49□□□□□ -2.33
CCDC93-209ENST00000488908 SLC1A1P43005 524 aa0.49□□□□□ -2.33
CCDC93-209ENST00000488908 CMC4P56277 68 aaPredicted RBP0.49□□□□□ -2.33
CCDC93-209ENST00000488908 DEFB103AP81534 67 aa0.49□□□□□ -2.33
CCDC93-209ENST00000488908 IL5RAQ01344 420 aa0.49□□□□□ -2.33
CCDC93-209ENST00000488908 GPM6BQ13491 265 aa0.49□□□□□ -2.33
CCDC93-209ENST00000488908 PPP1R7Q15435 360 aa0.49□□□□□ -2.33
CCDC93-209ENST00000488908 CCDC92Q53HC0 331 aaPredicted RBP0.49□□□□□ -2.33
CCDC93-209ENST00000488908 PCOTHQ58A44 107 aa0.49□□□□□ -2.33
CCDC93-209ENST00000488908 PPM1LQ5SGD2 360 aa0.49□□□□□ -2.33
CCDC93-209ENST00000488908 MRPL2Q5T653 305 aaKnown RBP0.49□□□□□ -2.33
CCDC93-209ENST00000488908 TPTE2P1Q5T6R2 138 aa0.49□□□□□ -2.33
CCDC93-209ENST00000488908 Q6ZSR3 168 aa0.49□□□□□ -2.33
CCDC93-209ENST00000488908 NIPA1Q7RTP0 329 aa0.49□□□□□ -2.33
CCDC93-209ENST00000488908 NBPF5PQ86XG9 351 aaPredicted RBP0.49□□□□□ -2.33
CCDC93-209ENST00000488908 IQCKQ8N0W5 287 aa0.49□□□□□ -2.33
CCDC93-209ENST00000488908 SLC25A29Q8N8R3 303 aa0.49□□□□□ -2.33
CCDC93-209ENST00000488908 SNX31Q8N9S9 440 aa0.49□□□□□ -2.33
CCDC93-209ENST00000488908 GPR26Q8NDV2 337 aa0.49□□□□□ -2.33
CCDC93-209ENST00000488908 OR4C13Q8NGP0 309 aa0.49□□□□□ -2.33
CCDC93-209ENST00000488908 RXFP4Q8TDU9 374 aa0.49□□□□□ -2.33
CCDC93-209ENST00000488908 GHSRQ92847 366 aa0.49□□□□□ -2.33
CCDC93-209ENST00000488908 RERGQ96A58 199 aaPredicted RBP0.49□□□□□ -2.33
CCDC93-209ENST00000488908 KCNS1Q96KK3 526 aa0.49□□□□□ -2.33
CCDC93-209ENST00000488908 SLC29A1Q99808 456 aa0.49□□□□□ -2.33
CCDC93-209ENST00000488908 SLIRPQ9GZT3 109 aaKnown RBP0.49□□□□□ -2.33
CCDC93-209ENST00000488908 PIGUQ9H490 435 aa0.49□□□□□ -2.33
CCDC93-209ENST00000488908 DYRK4Q9NR20 520 aa0.49□□□□□ -2.33
CCDC93-209ENST00000488908 CCDC59Q9P031 241 aaKnown RBP0.49□□□□□ -2.33
CCDC93-209ENST00000488908 LTBP2Q14767 1821 aa0.49□□□□□ -2.33
CCDC93-209ENST00000488908 VWA8A3KMH1 1905 aa0.48□□□□□ -2.33
CCDC93-209ENST00000488908 MYO9BQ13459 2157 aa0.48□□□□□ -2.33
CCDC93-209ENST00000488908 NCBP2LA6PVI3 153 aaKnown RBP0.48□□□□□ -2.33
CCDC93-209ENST00000488908 SIRPB1O00241 398 aa0.48□□□□□ -2.33
CCDC93-209ENST00000488908 SCAMP2O15127 329 aaKnown RBP0.48□□□□□ -2.33
CCDC93-209ENST00000488908 KCNK2O95069 426 aa0.48□□□□□ -2.33
CCDC93-209ENST00000488908 CDS2O95674 445 aa0.48□□□□□ -2.33
CCDC93-209ENST00000488908 GUCA1CO95843 209 aa0.48□□□□□ -2.33
CCDC93-209ENST00000488908 TSPAN13O95857 204 aa0.48□□□□□ -2.33
CCDC93-209ENST00000488908 HPRT1P00492 218 aa0.48□□□□□ -2.33
CCDC93-209ENST00000488908 NRASP01111 189 aa0.48□□□□□ -2.33
CCDC93-209ENST00000488908 HRASP01112 189 aa0.48□□□□□ -2.33
CCDC93-209ENST00000488908 KRASP01116 189 aa0.48□□□□□ -2.33
CCDC93-209ENST00000488908 CTSGP08311 255 aa0.48□□□□□ -2.33
CCDC93-209ENST00000488908 ZNF24P17028 368 aa0.48□□□□□ -2.33
CCDC93-209ENST00000488908 CSRP1P21291 193 aaKnown RBP0.48□□□□□ -2.33
CCDC93-209ENST00000488908 RRM2P31350 389 aa0.48□□□□□ -2.33
CCDC93-209ENST00000488908 PFN2P35080 140 aa0.48□□□□□ -2.33
CCDC93-209ENST00000488908 POLR2IP36954 125 aaKnown RBP0.48□□□□□ -2.33
CCDC93-209ENST00000488908 IFNAR2P48551 515 aa0.48□□□□□ -2.33
CCDC93-209ENST00000488908 ERFP50548 548 aa0.48□□□□□ -2.33
CCDC93-209ENST00000488908 ACLYP53396 1101 aa0.48□□□□□ -2.33
CCDC93-209ENST00000488908 OR12D2P58182 307 aa0.48□□□□□ -2.33
CCDC93-209ENST00000488908 EIF3EP60228 445 aaKnown RBP0.48□□□□□ -2.33
CCDC93-209ENST00000488908 SEMG2Q02383 582 aa0.48□□□□□ -2.33
CCDC93-209ENST00000488908 C2orf54Q08AI8 447 aa0.48□□□□□ -2.33
CCDC93-209ENST00000488908 IL24Q13007 206 aa0.48□□□□□ -2.33
CCDC93-209ENST00000488908 CUL2Q13617 745 aa0.48□□□□□ -2.33
CCDC93-209ENST00000488908 ZNF266Q14584 549 aa0.48□□□□□ -2.33
CCDC93-209ENST00000488908 ZNF181Q2M3W8 571 aa0.48□□□□□ -2.33
CCDC93-209ENST00000488908 C9orf135Q5VTT2 229 aa0.48□□□□□ -2.33
CCDC93-209ENST00000488908 MFSD14CQ5VZR4 134 aa0.48□□□□□ -2.33
CCDC93-209ENST00000488908 OPN5Q6U736 354 aa0.48□□□□□ -2.33
CCDC93-209ENST00000488908 TMEM107Q6UX40 140 aa0.48□□□□□ -2.33
CCDC93-209ENST00000488908 Q6ZSR6 202 aa0.48□□□□□ -2.33
CCDC93-209ENST00000488908 CMC1Q7Z7K0 106 aa0.48□□□□□ -2.33
CCDC93-209ENST00000488908 TMEM25Q86YD3 366 aa0.48□□□□□ -2.33
CCDC93-209ENST00000488908 BBS7Q8IWZ6 715 aa0.48□□□□□ -2.33
CCDC93-209ENST00000488908 BPIFCQ8NFQ6 507 aa0.48□□□□□ -2.33
CCDC93-209ENST00000488908 ZNF420Q8TAQ5 688 aaPredicted RBP0.48□□□□□ -2.33
CCDC93-209ENST00000488908 MUC7Q8TAX7 377 aa0.48□□□□□ -2.33
CCDC93-209ENST00000488908 TUBGCP3Q96CW5 907 aa0.48□□□□□ -2.33
CCDC93-209ENST00000488908 OTUB2Q96DC9 234 aa0.48□□□□□ -2.33
CCDC93-209ENST00000488908 NRBF2Q96F24 287 aa0.48□□□□□ -2.33
CCDC93-209ENST00000488908 OR4K3Q96R72 315 aa0.48□□□□□ -2.33
CCDC93-209ENST00000488908 EMC6Q9BV81 110 aa0.48□□□□□ -2.33
CCDC93-209ENST00000488908 RACGAP1Q9H0H5 632 aa0.48□□□□□ -2.33
CCDC93-209ENST00000488908 LRRC40Q9H9A6 602 aa0.48□□□□□ -2.33
CCDC93-209ENST00000488908 RETNQ9HD89 108 aa0.48□□□□□ -2.33
CCDC93-209ENST00000488908 RRAGDQ9NQL2 400 aaPredicted RBP0.48□□□□□ -2.33
CCDC93-209ENST00000488908 SLC39A1Q9NY26 324 aa0.48□□□□□ -2.33
CCDC93-209ENST00000488908 SLC2A8Q9NY64 477 aa0.48□□□□□ -2.33
CCDC93-209ENST00000488908 FARSAQ9Y285 508 aaKnown RBP0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms