RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	OR10A2	Q9H208	303 aa		10.78	□□□□□ -0.68
FDPS-204	ENST00000461507	SP140L	Q9H930	580 aa		10.78	□□□□□ -0.68
FDPS-204	ENST00000461507	ZNF275	Q9NSD4	429 aa	Predicted RBP	10.78	□□□□□ -0.68
FDPS-204	ENST00000461507	ZDHHC8	Q9ULC8	765 aa		10.78	□□□□□ -0.68
FDPS-204	ENST00000461507	TMEM14A	Q9Y6G1	99 aa		10.78	□□□□□ -0.68
FDPS-204	ENST00000461507	XRCC2	O43543	280 aa		10.77	□□□□□ -0.69
FDPS-204	ENST00000461507	OPRL1	P41146	370 aa		10.77	□□□□□ -0.69
FDPS-204	ENST00000461507	CXCR4	P61073	352 aa		10.77	□□□□□ -0.69
FDPS-204	ENST00000461507	MVK	Q03426	396 aa		10.77	□□□□□ -0.69
FDPS-204	ENST00000461507	ZNF92	Q03936	586 aa		10.77	□□□□□ -0.69
FDPS-204	ENST00000461507	KRTAP27-1	Q3LI81	207 aa		10.77	□□□□□ -0.69
FDPS-204	ENST00000461507	AVPI1	Q5T686	147 aa		10.77	□□□□□ -0.69
FDPS-204	ENST00000461507	AADACL4	Q5VUY2	407 aa		10.77	□□□□□ -0.69
FDPS-204	ENST00000461507	LPCAT4	Q643R3	524 aa		10.77	□□□□□ -0.69
FDPS-204	ENST00000461507	RFLNB	Q8N5W9	214 aa		10.77	□□□□□ -0.69
FDPS-204	ENST00000461507	OR8G5	Q8NG78	346 aa		10.77	□□□□□ -0.69
FDPS-204	ENST00000461507	OR10H4	Q8NGA5	316 aa		10.77	□□□□□ -0.69
FDPS-204	ENST00000461507	ITLN1	Q8WWA0	313 aa		10.77	□□□□□ -0.69
FDPS-204	ENST00000461507	RFK	Q969G6	155 aa		10.77	□□□□□ -0.69
FDPS-204	ENST00000461507	TIMD4	Q96H15	378 aa		10.77	□□□□□ -0.69
FDPS-204	ENST00000461507	REEP6	Q96HR9	211 aa		10.77	□□□□□ -0.69
FDPS-204	ENST00000461507	MBOAT4	Q96T53	435 aa		10.77	□□□□□ -0.69
FDPS-204	ENST00000461507	SLC29A1	Q99808	456 aa		10.77	□□□□□ -0.69
FDPS-204	ENST00000461507	C19orf24	Q9BVV8	132 aa		10.77	□□□□□ -0.69
FDPS-204	ENST00000461507	MRO	Q9BYG7	248 aa		10.77	□□□□□ -0.69
FDPS-204	ENST00000461507	WARS2	Q9UGM6	360 aa	Known RBP	10.77	□□□□□ -0.69
FDPS-204	ENST00000461507	COPS3	Q9UNS2	423 aa		10.77	□□□□□ -0.69
FDPS-204	ENST00000461507	LRP12	Q9Y561	859 aa		10.77	□□□□□ -0.69
FDPS-204	ENST00000461507	CACNG2	Q9Y698	323 aa		10.77	□□□□□ -0.69
FDPS-204	ENST00000461507	C5orf63	A6NC05	138 aa		10.76	□□□□□ -0.69
FDPS-204	ENST00000461507	FAM157A	C9JC47	383 aa		10.76	□□□□□ -0.69
FDPS-204	ENST00000461507	CLDN25	C9JDP6	229 aa		10.76	□□□□□ -0.69
FDPS-204	ENST00000461507		H0YHG0	523 aa		10.76	□□□□□ -0.69
FDPS-204	ENST00000461507	PHYH	O14832	338 aa		10.76	□□□□□ -0.69
FDPS-204	ENST00000461507	HLA-DPB1	P04440	258 aa		10.76	□□□□□ -0.69
FDPS-204	ENST00000461507	ADH4	P08319	380 aa		10.76	□□□□□ -0.69
FDPS-204	ENST00000461507	TNFRSF1A	P19438	455 aa		10.76	□□□□□ -0.69
FDPS-204	ENST00000461507	RIDA	P52758	137 aa	Known RBP	10.76	□□□□□ -0.69
FDPS-204	ENST00000461507	LMO4	P61968	165 aa		10.76	□□□□□ -0.69
FDPS-204	ENST00000461507	POU4F2	Q12837	409 aa		10.76	□□□□□ -0.69
FDPS-204	ENST00000461507	OR8G1	Q15617	311 aa		10.76	□□□□□ -0.69
FDPS-204	ENST00000461507		Q6ZR03	302 aa		10.76	□□□□□ -0.69
FDPS-204	ENST00000461507	COLCA1	Q6ZS62	124 aa		10.76	□□□□□ -0.69
FDPS-204	ENST00000461507	GLCCI1	Q86VQ1	547 aa		10.76	□□□□□ -0.69
FDPS-204	ENST00000461507	OR13G1	Q8NGZ3	307 aa		10.76	□□□□□ -0.69
FDPS-204	ENST00000461507	CYGB	Q8WWM9	190 aa		10.76	□□□□□ -0.69
FDPS-204	ENST00000461507	ASB17	Q8WXJ9	295 aa		10.76	□□□□□ -0.69
FDPS-204	ENST00000461507	DVL3	Q92997	716 aa	Predicted RBP	10.76	□□□□□ -0.69
FDPS-204	ENST00000461507	OR2V2	Q96R30	315 aa		10.76	□□□□□ -0.69
FDPS-204	ENST00000461507	ADAT1	Q9BUB4	502 aa	Known RBP	10.76	□□□□□ -0.69
FDPS-204	ENST00000461507	ADGRL4	Q9HBW9	690 aa		10.76	□□□□□ -0.69
FDPS-204	ENST00000461507	TMEM100	Q9NV29	134 aa		10.76	□□□□□ -0.69
FDPS-204	ENST00000461507	SMPD3	Q9NY59	655 aa	Predicted RBP	10.76	□□□□□ -0.69
FDPS-204	ENST00000461507	CD300LB	A8K4G0	201 aa		10.75	□□□□□ -0.69
FDPS-204	ENST00000461507	IQCF6	A8MYZ5	107 aa		10.75	□□□□□ -0.69
FDPS-204	ENST00000461507		F5H5P2	479 aa		10.75	□□□□□ -0.69
FDPS-204	ENST00000461507		H0YL77	283 aa		10.75	□□□□□ -0.69
FDPS-204	ENST00000461507	WNT9B	O14905	357 aa		10.75	□□□□□ -0.69
FDPS-204	ENST00000461507	MSMB	P08118	114 aa		10.75	□□□□□ -0.69
FDPS-204	ENST00000461507	ALOX5AP	P20292	161 aa		10.75	□□□□□ -0.69
FDPS-204	ENST00000461507	CA6	P23280	308 aa		10.75	□□□□□ -0.69
FDPS-204	ENST00000461507	ANOS1	P23352	680 aa		10.75	□□□□□ -0.69
FDPS-204	ENST00000461507	PEX2	P28328	305 aa		10.75	□□□□□ -0.69
FDPS-204	ENST00000461507	HTR1F	P30939	366 aa		10.75	□□□□□ -0.69
FDPS-204	ENST00000461507	OTX1	P32242	354 aa	Predicted RBP	10.75	□□□□□ -0.69
FDPS-204	ENST00000461507	CRYBB2	P43320	205 aa		10.75	□□□□□ -0.69
FDPS-204	ENST00000461507	SRP9	P49458	86 aa	Known RBP	10.75	□□□□□ -0.69
FDPS-204	ENST00000461507	PSMA6	P60900	246 aa	Known RBP	10.75	□□□□□ -0.69
FDPS-204	ENST00000461507	HNRNPA0	Q13151	305 aa	Known RBP	10.75	□□□□□ -0.69
FDPS-204	ENST00000461507	ZNF829	Q3KNS6	432 aa	Predicted RBP	10.75	□□□□□ -0.69
FDPS-204	ENST00000461507	ZNF322	Q6U7Q0	402 aa	Predicted RBP	10.75	□□□□□ -0.69
FDPS-204	ENST00000461507	PLEKHG7	Q6ZR37	379 aa		10.75	□□□□□ -0.69
FDPS-204	ENST00000461507	PEG10	Q86TG7	708 aa	Known RBP	10.75	□□□□□ -0.69
FDPS-204	ENST00000461507	YIPF7	Q8N8F6	280 aa		10.75	□□□□□ -0.69
FDPS-204	ENST00000461507	OR56B2P	Q8NGI1	322 aa		10.75	□□□□□ -0.69
FDPS-204	ENST00000461507	OR52H1	Q8NGJ2	320 aa		10.75	□□□□□ -0.69
FDPS-204	ENST00000461507	UBE2F	Q969M7	185 aa		10.75	□□□□□ -0.69
FDPS-204	ENST00000461507	TMEM186	Q96B77	213 aa		10.75	□□□□□ -0.69
FDPS-204	ENST00000461507	HRASLS5	Q96KN8	279 aa		10.75	□□□□□ -0.69
FDPS-204	ENST00000461507	VCX	Q9H320	206 aa		10.75	□□□□□ -0.69
FDPS-204	ENST00000461507	OPA3	Q9H6K4	179 aa		10.75	□□□□□ -0.69
FDPS-204	ENST00000461507	NIPAL2	Q9H841	368 aa		10.75	□□□□□ -0.69
FDPS-204	ENST00000461507	CLN6	Q9NWW5	311 aa		10.75	□□□□□ -0.69
FDPS-204	ENST00000461507	AASS	Q9UDR5	926 aa		10.75	□□□□□ -0.69
FDPS-204	ENST00000461507	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	10.75	□□□□□ -0.69	7e-12	■■□□□ 12.7
FDPS-204	ENST00000461507	LOC100130705	A0A1B0GUX0	176 aa		10.74	□□□□□ -0.69
FDPS-204	ENST00000461507	TMEM269	A0A1B0GVZ9	245 aa		10.74	□□□□□ -0.69
FDPS-204	ENST00000461507	SNTN	A6NMZ2	147 aa		10.74	□□□□□ -0.69
FDPS-204	ENST00000461507	ANKRD30BL	A7E2S9	258 aa		10.74	□□□□□ -0.69
FDPS-204	ENST00000461507	MAGEB4	O15481	346 aa	Predicted RBP	10.74	□□□□□ -0.69
FDPS-204	ENST00000461507	ENTPD6	O75354	484 aa		10.74	□□□□□ -0.69
FDPS-204	ENST00000461507	RPP14	O95059	124 aa	Known RBP	10.74	□□□□□ -0.69
FDPS-204	ENST00000461507	KRT8	P05787	483 aa		10.74	□□□□□ -0.69
FDPS-204	ENST00000461507	SBK2	P0C263	348 aa		10.74	□□□□□ -0.69
FDPS-204	ENST00000461507	GNAL	P38405	381 aa		10.74	□□□□□ -0.69
FDPS-204	ENST00000461507	IL5RA	Q01344	420 aa		10.74	□□□□□ -0.69
FDPS-204	ENST00000461507	SLC3A1	Q07837	685 aa		10.74	□□□□□ -0.69
FDPS-204	ENST00000461507	CDK5R2	Q13319	367 aa		10.74	□□□□□ -0.69
FDPS-204	ENST00000461507	SPRN	Q5BIV9	151 aa		10.74	□□□□□ -0.69
FDPS-204	ENST00000461507	LIPN	Q5VXI9	398 aa		10.74	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms