RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 SULT1C3Q6IMI6 304 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 NOXRED1Q6NXP6 359 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 GPR141Q7Z602 305 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 EPHX4Q8IUS5 362 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 ZNF695Q8IW36 515 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 CCDC36Q8IYA8 594 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 DYNAPQ8N1N2 210 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 METTL4Q8N3J2 472 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 GVQW1Q8N7I0 195 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 TMEM99Q8N816 258 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 OR2Z1Q8NG97 314 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 OR1J1Q8NGS3 322 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 FAM45AQ8TCE6 357 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 UBTD2Q8WUN7 234 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 TMEM255BQ8WV15 326 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 TNFRSF14Q92956 283 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 EXOSC8Q96B26 276 aaKnown RBP3.78□□□□□ -1.8
SDCBP-205ENST00000447267 NMD3Q96D46 503 aaKnown RBP3.78□□□□□ -1.8
SDCBP-205ENST00000447267 HES6Q96HZ4 224 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 BCL7BQ9BQE9 202 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 NEURL2Q9BR09 285 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 LINC00470Q9BZP3 86 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 PAIP1Q9H074 479 aaKnown RBP3.78□□□□□ -1.8
SDCBP-205ENST00000447267 KCNN2Q9H2S1 579 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 TUBA4BQ9H853 241 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 TRIM36Q9NQ86 728 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 CTPS2Q9NRF8 586 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 UBQLN4Q9NRR5 601 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 PAK5Q9P286 719 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 ERVK-18Q9QC07 812 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 ENOPH1Q9UHY7 261 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 PSME2Q9UL46 239 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.78□□□□□ -1.8
SDCBP-205ENST00000447267 HDGFL3Q9Y3E1 203 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 CHTOPQ9Y3Y2 248 aaKnown RBP3.78□□□□□ -1.8
SDCBP-205ENST00000447267 AGRNO00468 2067 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 SORL1Q92673 2214 aa3.78□□□□□ -1.8
SDCBP-205ENST00000447267 IGLV1-36A0A0B4J1U3 117 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 SMIM31A0A1B0GVY4 71 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 J3KRW8 73 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 RAB27BO00194 218 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 ZNF264O43296 627 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 GATCO43716 136 aaKnown RBP3.77□□□□□ -1.81
SDCBP-205ENST00000447267 MFN2O95140 757 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 WISP3O95389 354 aaPredicted RBP3.77□□□□□ -1.81
SDCBP-205ENST00000447267 TFAP2AP05549 437 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 S100A9P06702 114 aaKnown RBP3.77□□□□□ -1.81
SDCBP-205ENST00000447267 NQO1P15559 274 aaKnown RBP3.77□□□□□ -1.81
SDCBP-205ENST00000447267 LCN1P31025 176 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 PSMB10P40306 273 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 SLC9A3P48764 834 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 P2RY4P51582 365 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 UBE2E1P51965 193 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 MVDP53602 400 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 GNG2P59768 71 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 RAB14P61106 215 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 NAA20P61599 178 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 UBE2HP62256 183 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 VSNL1P62760 191 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 TRA2BP62995 288 aaKnown RBP3.77□□□□□ -1.81
SDCBP-205ENST00000447267 ZNF45Q02386 682 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 PTGR1Q14914 329 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 KPNB1Q14974 876 aaKnown RBP3.77□□□□□ -1.81
SDCBP-205ENST00000447267 OR4D1Q15615 310 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 KCNJ8Q15842 424 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 ODF3L2Q3SX64 289 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 KLHL26Q53HC5 615 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 CDKL4Q5MAI5 379 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 CCNJQ5T5M9 372 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 WDR93Q6P2C0 686 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 METAP1DQ6UB28 335 aaPredicted RBP3.77□□□□□ -1.81
SDCBP-205ENST00000447267 LRIG3Q6UXM1 1119 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 Q6ZR03 302 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 KRT74Q7RTS7 529 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 PIGWQ7Z7B1 504 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 HAPLN4Q86UW8 402 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 IFT20Q8IY31 132 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 ELMOD2Q8IZ81 293 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 SLC30A7Q8NEW0 376 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 OR5W2Q8NH69 310 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 GPR151Q8TDV0 419 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 GIPC3Q8TF64 312 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 PYROXD1Q8WU10 500 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 DNAJC9Q8WXX5 260 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 OTUB1Q96FW1 271 aaPredicted RBP3.77□□□□□ -1.81
SDCBP-205ENST00000447267 AMDHD1Q96NU7 426 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 SERPINI1Q99574 410 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 NAA11Q9BSU3 229 aaPredicted RBP3.77□□□□□ -1.81
SDCBP-205ENST00000447267 C3orf14Q9HBI5 128 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 CDH20Q9HBT6 801 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 ISYNA1Q9NPH2 558 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 EQTNQ9NQ60 294 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 SLC35C2Q9NQQ7 365 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 FAM212BQ9NTI7 297 aaPredicted RBP3.77□□□□□ -1.81
SDCBP-205ENST00000447267 GRHL1Q9NZI5 618 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 RNF14Q9UBS8 474 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 CHRNA9Q9UGM1 479 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 SLC12A4Q9UP95 1085 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 TCF19Q9Y242 345 aa3.77□□□□□ -1.81
SDCBP-205ENST00000447267 IFT52Q9Y366 437 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms