RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 HAS3O00219 553 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 ARPC1BO15143 372 aaKnown RBP2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 MAGEB4O15481 346 aaPredicted RBP2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 KDELR3O43731 214 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 NUDT21O43809 227 aaKnown RBP2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 ZNF821O75541 412 aaPredicted RBP2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 DFFBO76075 338 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 NXPH2O95156 264 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 FARS2O95363 451 aaKnown RBP2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 WISP3O95389 354 aaPredicted RBP2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 RLN1P04808 185 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 IFNA6P05013 189 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 IL3P08700 152 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 NR2F1P10589 423 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 SLC25A4P12235 298 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 CEBPBP17676 345 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 IDSP22304 550 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 SLC2A5P22732 501 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 DTYMKP23919 212 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 HMGB2P26583 209 aaKnown RBP2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 RPL4P36578 427 aaKnown RBP2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 SLC1A2P43004 574 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 RAD52P43351 418 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 OR3A1P47881 315 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 FHITP49789 147 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 CAV2P51636 162 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 LUMP51884 338 aaPredicted RBP2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 ZNF140P52738 457 aaPredicted RBP2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 CRISP1P54107 249 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 CRISP3P54108 245 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 GEMP55040 296 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 CLDN8P56748 225 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 KLF3P57682 345 aaPredicted RBP2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 OR10A3P58181 314 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 LSM6P62312 80 aaKnown RBP2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 ARF6P62330 175 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 RPS25P62851 125 aaKnown RBP2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 CDK6Q00534 326 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 REEP5Q00765 189 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 SPIBQ01892 262 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 NOTCH2Q04721 2471 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 RAB40BQ12829 278 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 TMEM132DQ14C87 1099 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 HEPACAMQ14CZ8 416 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 JOSD1Q15040 202 aaPredicted RBP2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 P2RY6Q15077 328 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 PAFAH1B3Q15102 231 aaKnown RBP2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 RBBP7Q16576 425 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 CDO1Q16878 200 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 GOLGA7BQ2TAP0 167 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 DEFB115Q30KQ5 88 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 ZNF699Q32M78 642 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 MOGAT2Q3SYC2 334 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 SLC36A2Q495M3 483 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 SCGB2B2Q4G0G5 96 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 NKAIN1Q4KMZ8 207 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 IFI44LQ53G44 452 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 PDLIM3Q53GG5 364 aaPredicted RBP2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 ACTBL2Q562R1 376 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 MESTQ5EB52 335 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 SLC25A30Q5SVS4 291 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 NCMAPQ5T1S8 102 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 C1orf185Q5T7R7 199 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 ZC2HC1BQ5TFG8 222 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 FBXW9Q5XUX1 488 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 GLT8D1Q68CQ7 371 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 KCTD11Q693B1 232 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 OR6B2Q6IFH4 312 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 PSRC1Q6PGN9 363 aaPredicted RBP2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 RICTORQ6R327 1708 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 ENPP7Q6UWV6 458 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 B3GLCTQ6Y288 498 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 C6orf120Q7Z4R8 191 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 GOLGA7Q7Z5G4 137 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 VRK2Q86Y07 508 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 CACUL1Q86Y37 369 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 ZNF573Q86YE8 665 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 SLC30A8Q8IWU4 369 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 BAP18Q8IXM2 172 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 C4orf19Q8IY42 314 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 GPR65Q8IYL9 337 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 ZNF567Q8N184 647 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 SAMD12Q8N8I0 201 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 AQP11Q8NBQ7 271 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 CCDC54Q8NEL0 328 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 OR6J1Q8NGC5 347 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 OR4K2Q8NGD2 314 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 OR2AP1Q8NGE2 309 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 OR4C15Q8NGM1 316 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 OR1S2Q8NGQ3 325 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 OR13C8Q8NGS7 320 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 FGFBP3Q8TAT2 258 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 STAG3L4Q8TBR4 150 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 RNASEH2CQ8TDP1 164 aaKnown RBP2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 THEM6Q8WUY1 208 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 PHLDA1Q8WV24 401 aaPredicted RBP2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 SMIM4Q8WVI0 70 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 TNFAIP8L1Q8WVP5 186 aa2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 GEMIN6Q8WXD5 167 aaKnown RBP2.89□□□□□ -1.95
SDCBPP3-201ENST00000419629 THRSPQ92748 146 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms