RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 USP43Q70EL4 1123 aa11.54□□□□□ -0.56
CXCL12-205ENST00000395794 DPY19L4Q7Z388 723 aa11.54□□□□□ -0.56
CXCL12-205ENST00000395794 KLBQ86Z14 1044 aa11.54□□□□□ -0.56
CXCL12-205ENST00000395794 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.54□□□□□ -0.56
CXCL12-205ENST00000395794 OR2AE1Q8NHA4 323 aa11.54□□□□□ -0.56
CXCL12-205ENST00000395794 SSBP3Q9BWW4 388 aaPredicted RBP11.54□□□□□ -0.56
CXCL12-205ENST00000395794 TMEM165Q9HC07 324 aa11.54□□□□□ -0.56
CXCL12-205ENST00000395794 UFSP2Q9NUQ7 469 aa11.54□□□□□ -0.56
CXCL12-205ENST00000395794 MRPL15Q9P015 296 aaKnown RBP11.54□□□□□ -0.56
CXCL12-205ENST00000395794 KIF17Q9P2E2 1029 aa11.54□□□□□ -0.56
CXCL12-205ENST00000395794 POLR3KQ9Y2Y1 108 aaPredicted RBP11.54□□□□□ -0.56
CXCL12-205ENST00000395794 AUP1Q9Y679 476 aa11.54□□□□□ -0.56
CXCL12-205ENST00000395794 A8MXK9 166 aa11.53□□□□□ -0.56
CXCL12-205ENST00000395794 F5H0A9 414 aaPredicted RBP11.53□□□□□ -0.56
CXCL12-205ENST00000395794 TRIM77I1YAP6 450 aa11.53□□□□□ -0.56
CXCL12-205ENST00000395794 FKBP6O75344 327 aa11.53□□□□□ -0.56
CXCL12-205ENST00000395794 VENTXO95231 258 aa11.53□□□□□ -0.56
CXCL12-205ENST00000395794 WNT2P09544 360 aa11.53□□□□□ -0.56
CXCL12-205ENST00000395794 H2BFMP0C1H6 154 aa11.53□□□□□ -0.56
CXCL12-205ENST00000395794 PSKH1P11801 424 aa11.53□□□□□ -0.56
CXCL12-205ENST00000395794 CFL1P23528 166 aaKnown RBP11.53□□□□□ -0.56
CXCL12-205ENST00000395794 RASSF2P50749 326 aa11.53□□□□□ -0.56
CXCL12-205ENST00000395794 SEC61A1P61619 476 aaKnown RBP11.53□□□□□ -0.56
CXCL12-205ENST00000395794 ZNF154Q13106 437 aa11.53□□□□□ -0.56
CXCL12-205ENST00000395794 MAB21L1Q13394 359 aa11.53□□□□□ -0.56
CXCL12-205ENST00000395794 KLHL12Q53G59 568 aa11.53□□□□□ -0.56
CXCL12-205ENST00000395794 LINC01590Q5TEZ4 76 aa11.53□□□□□ -0.56
CXCL12-205ENST00000395794 PLBD1Q6P4A8 553 aa11.53□□□□□ -0.56
CXCL12-205ENST00000395794 RHOUQ7L0Q8 258 aa11.53□□□□□ -0.56
CXCL12-205ENST00000395794 TMEM179BQ7Z7N9 219 aa11.53□□□□□ -0.56
CXCL12-205ENST00000395794 PLPP7Q8NBV4 271 aa11.53□□□□□ -0.56
CXCL12-205ENST00000395794 OR8B3Q8NGG8 313 aa11.53□□□□□ -0.56
CXCL12-205ENST00000395794 OR52H1Q8NGJ2 320 aa11.53□□□□□ -0.56
CXCL12-205ENST00000395794 OR8S1Q8NH09 359 aa11.53□□□□□ -0.56
CXCL12-205ENST00000395794 Q8TCH9 128 aa11.53□□□□□ -0.56
CXCL12-205ENST00000395794 NEIL1Q96FI4 390 aaPredicted RBP11.53□□□□□ -0.56
CXCL12-205ENST00000395794 OR8B2Q96RD0 313 aa11.53□□□□□ -0.56
CXCL12-205ENST00000395794 TMEM246Q9BRR3 403 aa11.53□□□□□ -0.56
CXCL12-205ENST00000395794 ABHD6Q9BV23 337 aa11.53□□□□□ -0.56
CXCL12-205ENST00000395794 MMP26Q9NRE1 261 aa11.53□□□□□ -0.56
CXCL12-205ENST00000395794 C14orf119Q9NWQ9 140 aa11.53□□□□□ -0.56
CXCL12-205ENST00000395794 FAM53CQ9NYF3 392 aa11.53□□□□□ -0.56
CXCL12-205ENST00000395794 OPN4Q9UHM6 478 aa11.53□□□□□ -0.56
CXCL12-205ENST00000395794 POMPQ9Y244 141 aa11.53□□□□□ -0.56
CXCL12-205ENST00000395794 INSIG2Q9Y5U4 225 aa11.53□□□□□ -0.56
CXCL12-205ENST00000395794 TANC2Q9HCD6 1990 aa11.52□□□□□ -0.56
CXCL12-205ENST00000395794 STAB1Q9NY15 2570 aa11.52□□□□□ -0.56
CXCL12-205ENST00000395794 DYSFO75923 2080 aa11.52□□□□□ -0.57
CXCL12-205ENST00000395794 TRAPPC2LH3BP13 241 aa11.52□□□□□ -0.57
CXCL12-205ENST00000395794 FAM20BO75063 409 aa11.52□□□□□ -0.57
CXCL12-205ENST00000395794 ZNF12P17014 697 aa11.52□□□□□ -0.57
CXCL12-205ENST00000395794 PRKACGP22612 351 aa11.52□□□□□ -0.57
CXCL12-205ENST00000395794 PMELP40967 661 aa11.52□□□□□ -0.57
CXCL12-205ENST00000395794 HILS1P60008 231 aa11.52□□□□□ -0.57
CXCL12-205ENST00000395794 RPS7P62081 194 aaKnown RBP11.52□□□□□ -0.57
CXCL12-205ENST00000395794 SNCBQ16143 134 aa11.52□□□□□ -0.57
CXCL12-205ENST00000395794 ZNF404Q494X3 552 aa11.52□□□□□ -0.57
CXCL12-205ENST00000395794 PRAMEF6Q5VXH4 476 aa11.52□□□□□ -0.57
CXCL12-205ENST00000395794 LRRN1Q6UXK5 716 aa11.52□□□□□ -0.57
CXCL12-205ENST00000395794 DCDC5Q6ZRR9 648 aa11.52□□□□□ -0.57
CXCL12-205ENST00000395794 FTMTQ8N4E7 242 aa11.52□□□□□ -0.57
CXCL12-205ENST00000395794 DEFB108BQ8NET1 73 aa11.52□□□□□ -0.57
CXCL12-205ENST00000395794 OR56B2PQ8NGI1 322 aa11.52□□□□□ -0.57
CXCL12-205ENST00000395794 THEM6Q8WUY1 208 aa11.52□□□□□ -0.57
CXCL12-205ENST00000395794 RNF133Q8WVZ7 376 aa11.52□□□□□ -0.57
CXCL12-205ENST00000395794 DNAJC9Q8WXX5 260 aa11.52□□□□□ -0.57
CXCL12-205ENST00000395794 SLC7A6OSQ96CW6 309 aaPredicted RBP11.52□□□□□ -0.57
CXCL12-205ENST00000395794 ZMYND19Q96E35 227 aaPredicted RBP11.52□□□□□ -0.57
CXCL12-205ENST00000395794 SLC6A7Q99884 636 aa11.52□□□□□ -0.57
CXCL12-205ENST00000395794 OR10A2Q9H208 303 aa11.52□□□□□ -0.57
CXCL12-205ENST00000395794 NTN4Q9HB63 628 aa11.52□□□□□ -0.57
CXCL12-205ENST00000395794 TRIM36Q9NQ86 728 aa11.52□□□□□ -0.57
CXCL12-205ENST00000395794 DNAJC27Q9NZQ0 273 aa11.52□□□□□ -0.57
CXCL12-205ENST00000395794 RNF7Q9UBF6 113 aa11.52□□□□□ -0.57
CXCL12-205ENST00000395794 TCRBV3S1A0A5B6 114 aa11.51□□□□□ -0.57
CXCL12-205ENST00000395794 A6NLC8 198 aa11.51□□□□□ -0.57
CXCL12-205ENST00000395794 PRODHO43272 600 aa11.51□□□□□ -0.57
CXCL12-205ENST00000395794 GRPP07492 148 aa11.51□□□□□ -0.57
CXCL12-205ENST00000395794 LYNP07948 512 aa11.51□□□□□ -0.57
CXCL12-205ENST00000395794 GNALP38405 381 aa11.51□□□□□ -0.57
CXCL12-205ENST00000395794 PITPNBP48739 271 aa11.51□□□□□ -0.57
CXCL12-205ENST00000395794 ACTG1P63261 375 aa11.51□□□□□ -0.57
CXCL12-205ENST00000395794 CDK5Q00535 292 aa11.51□□□□□ -0.57
CXCL12-205ENST00000395794 OR8B8Q15620 311 aa11.51□□□□□ -0.57
CXCL12-205ENST00000395794 MPPED2Q15777 294 aa11.51□□□□□ -0.57
CXCL12-205ENST00000395794 GFOD2Q3B7J2 385 aa11.51□□□□□ -0.57
CXCL12-205ENST00000395794 FAM57BQ71RH2 274 aa11.51□□□□□ -0.57
CXCL12-205ENST00000395794 CPOQ8IVL8 374 aa11.51□□□□□ -0.57
CXCL12-205ENST00000395794 HS3ST5Q8IZT8 346 aa11.51□□□□□ -0.57
CXCL12-205ENST00000395794 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.51□□□□□ -0.57
CXCL12-205ENST00000395794 BOLLQ8N9W6 283 aaKnown RBP11.51□□□□□ -0.57
CXCL12-205ENST00000395794 PAPD5Q8NDF8 572 aaKnown RBP11.51□□□□□ -0.57
CXCL12-205ENST00000395794 SEMA6DQ8NFY4 1073 aa11.51□□□□□ -0.57
CXCL12-205ENST00000395794 SPSB4Q96A44 273 aa11.51□□□□□ -0.57
CXCL12-205ENST00000395794 NRBF2Q96F24 287 aa11.51□□□□□ -0.57
CXCL12-205ENST00000395794 REEP6Q96HR9 211 aa11.51□□□□□ -0.57
CXCL12-205ENST00000395794 PGAM5Q96HS1 289 aa11.51□□□□□ -0.57
CXCL12-205ENST00000395794 PRRG3Q9BZD7 231 aa11.51□□□□□ -0.57
CXCL12-205ENST00000395794 MMADHCQ9H3L0 296 aaPredicted RBP11.51□□□□□ -0.57
CXCL12-205ENST00000395794 RGCCQ9H4X1 137 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms