RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 TRBV5-7A0A0A0MS05 114 aa16.35■□□□□ 0.21
PDLIM3-202ENST00000284770 H3BSH0 61 aa16.35■□□□□ 0.21
PDLIM3-202ENST00000284770 SYT7O43581 403 aa16.35■□□□□ 0.21
PDLIM3-202ENST00000284770 CLDN14O95500 239 aa16.35■□□□□ 0.21
PDLIM3-202ENST00000284770 THBDP07204 575 aa16.35■□□□□ 0.21
PDLIM3-202ENST00000284770 ZNF35P13682 527 aa16.35■□□□□ 0.21
PDLIM3-202ENST00000284770 CCL1P22362 96 aa16.35■□□□□ 0.21
PDLIM3-202ENST00000284770 SORDQ00796 357 aa16.35■□□□□ 0.21
PDLIM3-202ENST00000284770 TFF3Q07654 80 aa16.35■□□□□ 0.21
PDLIM3-202ENST00000284770 HNRNPA0Q13151 305 aaKnown RBP16.35■□□□□ 0.21
PDLIM3-202ENST00000284770 GFOD2Q3B7J2 385 aa16.35■□□□□ 0.21
PDLIM3-202ENST00000284770 TPRA1Q86W33 373 aa16.35■□□□□ 0.21
PDLIM3-202ENST00000284770 ZNF101Q8IZC7 436 aa16.35■□□□□ 0.21
PDLIM3-202ENST00000284770 LYZL4Q96KX0 146 aa16.35■□□□□ 0.21
PDLIM3-202ENST00000284770 WFIKKN1Q96NZ8 548 aa16.35■□□□□ 0.21
PDLIM3-202ENST00000284770 KCNS3Q9BQ31 491 aa16.35■□□□□ 0.21
PDLIM3-202ENST00000284770 RGCCQ9H4X1 137 aa16.35■□□□□ 0.21
PDLIM3-202ENST00000284770 EIF3KQ9UBQ5 218 aaKnown RBP16.35■□□□□ 0.21
PDLIM3-202ENST00000284770 PLEKHB1Q9UF11 243 aaPredicted RBP16.35■□□□□ 0.21
PDLIM3-202ENST00000284770 ZNF391Q9UJN7 358 aa16.35■□□□□ 0.21
PDLIM3-202ENST00000284770 A0A1B0GVI7 797 aa16.34■□□□□ 0.21
PDLIM3-202ENST00000284770 SMIM30A4D0T7 59 aa16.34■□□□□ 0.21
PDLIM3-202ENST00000284770 J3QW42 95 aa16.34■□□□□ 0.21
PDLIM3-202ENST00000284770 M0R1B8 84 aa16.34■□□□□ 0.21
PDLIM3-202ENST00000284770 NGFP01138 241 aa16.34■□□□□ 0.21
PDLIM3-202ENST00000284770 MYL9P24844 172 aa16.34■□□□□ 0.21
PDLIM3-202ENST00000284770 MAPK3P27361 379 aaPredicted RBP16.34■□□□□ 0.21
PDLIM3-202ENST00000284770 GRNP28799 593 aaKnown RBP16.34■□□□□ 0.21
PDLIM3-202ENST00000284770 CAV3P56539 151 aa16.34■□□□□ 0.21
PDLIM3-202ENST00000284770 HSD17B12Q53GQ0 312 aa16.34■□□□□ 0.21
PDLIM3-202ENST00000284770 DOK3Q7L591 496 aa16.34■□□□□ 0.21
PDLIM3-202ENST00000284770 COMMD2Q86X83 199 aa16.34■□□□□ 0.21
PDLIM3-202ENST00000284770 OR6Q1Q8NGQ2 317 aa16.34■□□□□ 0.21
PDLIM3-202ENST00000284770 TSEN15Q8WW01 171 aaKnown RBP16.34■□□□□ 0.21
PDLIM3-202ENST00000284770 ORAI1Q96D31 301 aa16.34■□□□□ 0.21
PDLIM3-202ENST00000284770 DIDO1Q9BTC0 2240 aaKnown RBP16.34■□□□□ 0.21
PDLIM3-202ENST00000284770 A0A075B6Q4 140 aa16.33■□□□□ 0.21
PDLIM3-202ENST00000284770 XRCC2O43543 280 aa16.33■□□□□ 0.21
PDLIM3-202ENST00000284770 NCR1O76036 304 aa16.33■□□□□ 0.21
PDLIM3-202ENST00000284770 RAF1P04049 648 aa16.33■□□□□ 0.21
PDLIM3-202ENST00000284770 SOX2P48431 317 aa16.33■□□□□ 0.21
PDLIM3-202ENST00000284770 NAAAQ02083 359 aa16.33■□□□□ 0.21
PDLIM3-202ENST00000284770 GLYATL3Q5SZD4 288 aa16.33■□□□□ 0.21
PDLIM3-202ENST00000284770 PLPP7Q8NBV4 271 aa16.33■□□□□ 0.21
PDLIM3-202ENST00000284770 OR2AE1Q8NHA4 323 aa16.33■□□□□ 0.21
PDLIM3-202ENST00000284770 THRSPQ92748 146 aa16.33■□□□□ 0.21
PDLIM3-202ENST00000284770 TMEM106AQ96A25 262 aa16.33■□□□□ 0.21
PDLIM3-202ENST00000284770 ZC3HAV1LQ96H79 300 aaKnown RBP16.33■□□□□ 0.21
PDLIM3-202ENST00000284770 REEP6Q96HR9 211 aa16.33■□□□□ 0.21
PDLIM3-202ENST00000284770 SOX7Q9BT81 388 aa16.33■□□□□ 0.21
PDLIM3-202ENST00000284770 NDRG3Q9UGV2 375 aa16.33■□□□□ 0.21
PDLIM3-202ENST00000284770 RALYQ9UKM9 306 aaKnown RBP16.33■□□□□ 0.21
PDLIM3-202ENST00000284770 DHDHQ9UQ10 334 aa16.33■□□□□ 0.21
PDLIM3-202ENST00000284770 STARD10Q9Y365 291 aa16.33■□□□□ 0.21
PDLIM3-202ENST00000284770 IGHV2OR16-5A0A0B4J2B6 119 aa16.33■□□□□ 0.2
PDLIM3-202ENST00000284770 INHBBP09529 407 aa16.33■□□□□ 0.2
PDLIM3-202ENST00000284770 SRMP19623 302 aa16.33■□□□□ 0.2
PDLIM3-202ENST00000284770 OR13C3Q8NGS6 347 aa16.33■□□□□ 0.2
PDLIM3-202ENST00000284770 SPSB4Q96A44 273 aa16.33■□□□□ 0.2
PDLIM3-202ENST00000284770 FAM71F1Q96KD3 344 aaPredicted RBP16.33■□□□□ 0.2
PDLIM3-202ENST00000284770 A0A0G2JK05 382 aa16.32■□□□□ 0.2
PDLIM3-202ENST00000284770 ZNF12P17014 697 aa16.32■□□□□ 0.2
PDLIM3-202ENST00000284770 BMXP51813 675 aa16.32■□□□□ 0.2
PDLIM3-202ENST00000284770 UCP2P55851 309 aa16.32■□□□□ 0.2
PDLIM3-202ENST00000284770 ZNF92Q03936 586 aa16.32■□□□□ 0.2
PDLIM3-202ENST00000284770 MALLQ13021 153 aa16.32■□□□□ 0.2
PDLIM3-202ENST00000284770 CEP78Q5JTW2 689 aa16.32■□□□□ 0.2
PDLIM3-202ENST00000284770 Q6ZSR3 168 aa16.32■□□□□ 0.2
PDLIM3-202ENST00000284770 RFPL4BQ6ZWI9 263 aa16.32■□□□□ 0.2
PDLIM3-202ENST00000284770 WFDC8Q8IUA0 241 aa16.32■□□□□ 0.2
PDLIM3-202ENST00000284770 CCDC54Q8NEL0 328 aa16.32■□□□□ 0.2
PDLIM3-202ENST00000284770 OR5L1Q8NGL2 311 aa16.32■□□□□ 0.2
PDLIM3-202ENST00000284770 AKAP1Q92667 903 aaKnown RBP eCLIP16.32■□□□□ 0.2
PDLIM3-202ENST00000284770 C6orf62Q9GZU0 229 aaPredicted RBP16.32■□□□□ 0.2
PDLIM3-202ENST00000284770 ZNF275Q9NSD4 429 aaPredicted RBP16.32■□□□□ 0.2
PDLIM3-202ENST00000284770 ZNF462Q96JM2 2506 aa16.32■□□□□ 0.2
PDLIM3-202ENST00000284770 LOC390937A0A1W2PQ73 354 aa16.31■□□□□ 0.2
PDLIM3-202ENST00000284770 SMPD2O60906 423 aa16.31■□□□□ 0.2
PDLIM3-202ENST00000284770 MTRF1O75570 445 aaKnown RBP16.31■□□□□ 0.2
PDLIM3-202ENST00000284770 DHRS3O75911 302 aa16.31■□□□□ 0.2
PDLIM3-202ENST00000284770 CD2P06729 351 aa16.31■□□□□ 0.2
PDLIM3-202ENST00000284770 CFL1P23528 166 aaKnown RBP16.31■□□□□ 0.2
PDLIM3-202ENST00000284770 CALCRP30988 508 aa16.31■□□□□ 0.2
PDLIM3-202ENST00000284770 PEX19P40855 299 aa16.31■□□□□ 0.2
PDLIM3-202ENST00000284770 OR10A3P58181 314 aa16.31■□□□□ 0.2
PDLIM3-202ENST00000284770 MOGQ16653 247 aa16.31■□□□□ 0.2
PDLIM3-202ENST00000284770 UNQ6126/PRO20091Q6UXV3 157 aa16.31■□□□□ 0.2
PDLIM3-202ENST00000284770 OR14K1Q8NGZ2 314 aa16.31■□□□□ 0.2
PDLIM3-202ENST00000284770 NGBQ9NPG2 151 aa16.31■□□□□ 0.2
PDLIM3-202ENST00000284770 CRYAAP02489 173 aa16.31■□□□□ 0.2
PDLIM3-202ENST00000284770 FAM157BP0CG42 384 aa16.31■□□□□ 0.2
PDLIM3-202ENST00000284770 RAB3BP20337 219 aa16.31■□□□□ 0.2
PDLIM3-202ENST00000284770 PTAFRP25105 342 aa16.31■□□□□ 0.2
PDLIM3-202ENST00000284770 CD40P25942 277 aa16.31■□□□□ 0.2
PDLIM3-202ENST00000284770 RAD52P43351 418 aa16.31■□□□□ 0.2
PDLIM3-202ENST00000284770 GK2Q14410 553 aaPredicted RBP16.31■□□□□ 0.2
PDLIM3-202ENST00000284770 ASPHD2Q6ICH7 369 aa16.31■□□□□ 0.2
PDLIM3-202ENST00000284770 TMEM108Q6UXF1 575 aa16.31■□□□□ 0.2
PDLIM3-202ENST00000284770 REPIN1Q9BWE0 567 aaKnown RBP16.31■□□□□ 0.2
PDLIM3-202ENST00000284770 OR51B6Q9H340 312 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms