RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 OPA3Q9H6K4 179 aa11.54□□□□□ -0.56
SLIRP-201ENST00000238688 TBCCD1Q9NVR7 557 aa11.54□□□□□ -0.56
SLIRP-201ENST00000238688 STEAP1Q9UHE8 339 aa11.54□□□□□ -0.56
SLIRP-201ENST00000238688 FREM1Q5H8C1 2179 aa11.54□□□□□ -0.56
SLIRP-201ENST00000238688 A0A1B0GTH9 108 aa11.53□□□□□ -0.56
SLIRP-201ENST00000238688 C19orf84I3L1E1 186 aa11.53□□□□□ -0.56
SLIRP-201ENST00000238688 SLC17A2O00624 439 aa11.53□□□□□ -0.56
SLIRP-201ENST00000238688 CTDSPLO15194 276 aa11.53□□□□□ -0.56
SLIRP-201ENST00000238688 DOK2O60496 412 aa11.53□□□□□ -0.56
SLIRP-201ENST00000238688 WDR1O75083 606 aa11.53□□□□□ -0.56
SLIRP-201ENST00000238688 SCGNO76038 276 aa11.53□□□□□ -0.56
SLIRP-201ENST00000238688 UBL3O95164 117 aa11.53□□□□□ -0.56
SLIRP-201ENST00000238688 WNT11O96014 354 aa11.53□□□□□ -0.56
SLIRP-201ENST00000238688 NTF4P34130 210 aa11.53□□□□□ -0.56
SLIRP-201ENST00000238688 DDOSTP39656 456 aa11.53□□□□□ -0.56
SLIRP-201ENST00000238688 OXA1LQ15070 435 aa11.53□□□□□ -0.56
SLIRP-201ENST00000238688 CCDC92Q53HC0 331 aaPredicted RBP11.53□□□□□ -0.56
SLIRP-201ENST00000238688 ZBTB37Q5TC79 503 aa11.53□□□□□ -0.56
SLIRP-201ENST00000238688 TSPO2Q5TGU0 170 aa11.53□□□□□ -0.56
SLIRP-201ENST00000238688 FBXW9Q5XUX1 488 aa11.53□□□□□ -0.56
SLIRP-201ENST00000238688 ZNF529Q6P280 563 aa11.53□□□□□ -0.56
SLIRP-201ENST00000238688 TMEM53Q6P2H8 277 aa11.53□□□□□ -0.56
SLIRP-201ENST00000238688 MTFR2Q6P444 385 aa11.53□□□□□ -0.56
SLIRP-201ENST00000238688 ANKRD16Q6P6B7 361 aa11.53□□□□□ -0.56
SLIRP-201ENST00000238688 SPATC1Q76KD6 591 aa11.53□□□□□ -0.56
SLIRP-201ENST00000238688 PRSS45Q7RTY3 260 aa11.53□□□□□ -0.56
SLIRP-201ENST00000238688 LYSMD2Q8IV50 215 aa11.53□□□□□ -0.56
SLIRP-201ENST00000238688 SAMD12Q8N8I0 201 aa11.53□□□□□ -0.56
SLIRP-201ENST00000238688 C1orf162Q8NEQ5 155 aaPredicted RBP11.53□□□□□ -0.56
SLIRP-201ENST00000238688 TECTBQ96PL2 329 aa11.53□□□□□ -0.56
SLIRP-201ENST00000238688 PPP1R3EQ9H7J1 279 aa11.53□□□□□ -0.56
SLIRP-201ENST00000238688 TMEM138Q9NPI0 162 aa11.53□□□□□ -0.56
SLIRP-201ENST00000238688 BRD7Q9NPI1 651 aa11.53□□□□□ -0.56
SLIRP-201ENST00000238688 SLC7A10Q9NS82 523 aa11.53□□□□□ -0.56
SLIRP-201ENST00000238688 POLQO75417 2590 aa11.53□□□□□ -0.56
SLIRP-201ENST00000238688 ADGRG4Q8IZF6 3080 aa11.52□□□□□ -0.56
SLIRP-201ENST00000238688 FAM25AB3EWG3 89 aa11.52□□□□□ -0.57
SLIRP-201ENST00000238688 FAM25CB3EWG5 89 aa11.52□□□□□ -0.57
SLIRP-201ENST00000238688 FAM25GB3EWG6 89 aa11.52□□□□□ -0.57
SLIRP-201ENST00000238688 DVL2O14641 736 aa11.52□□□□□ -0.57
SLIRP-201ENST00000238688 HPGDSO60760 199 aa11.52□□□□□ -0.57
SLIRP-201ENST00000238688 NCR1O76036 304 aa11.52□□□□□ -0.57
SLIRP-201ENST00000238688 ALDOBP05062 364 aa11.52□□□□□ -0.57
SLIRP-201ENST00000238688 SERPINA5P05154 406 aa11.52□□□□□ -0.57
SLIRP-201ENST00000238688 B4GALT1P15291 398 aa11.52□□□□□ -0.57
SLIRP-201ENST00000238688 AGAP20933 346 aa11.52□□□□□ -0.57
SLIRP-201ENST00000238688 SOX2P48431 317 aa11.52□□□□□ -0.57
SLIRP-201ENST00000238688 PITPNBP48739 271 aa11.52□□□□□ -0.57
SLIRP-201ENST00000238688 GUSBP1Q15486 140 aa11.52□□□□□ -0.57
SLIRP-201ENST00000238688 ZNF79Q15937 498 aa11.52□□□□□ -0.57
SLIRP-201ENST00000238688 TRIM16LQ309B1 348 aa11.52□□□□□ -0.57
SLIRP-201ENST00000238688 NSUN5P2Q63ZY6 315 aa11.52□□□□□ -0.57
SLIRP-201ENST00000238688 C3P1Q6ZMU1 363 aa11.52□□□□□ -0.57
SLIRP-201ENST00000238688 Q6ZNX1 250 aa11.52□□□□□ -0.57
SLIRP-201ENST00000238688 UTS2BQ765I0 119 aa11.52□□□□□ -0.57
SLIRP-201ENST00000238688 FAM214BQ7L5A3 538 aa11.52□□□□□ -0.57
SLIRP-201ENST00000238688 ZNF433Q8N7K0 673 aaPredicted RBP11.52□□□□□ -0.57
SLIRP-201ENST00000238688 OR8B12Q8NGG6 310 aa11.52□□□□□ -0.57
SLIRP-201ENST00000238688 OR6K3Q8NGY3 331 aa11.52□□□□□ -0.57
SLIRP-201ENST00000238688 FBXO17Q96EF6 278 aa11.52□□□□□ -0.57
SLIRP-201ENST00000238688 PGAM5Q96HS1 289 aa11.52□□□□□ -0.57
SLIRP-201ENST00000238688 SORCS2Q96PQ0 1159 aa11.52□□□□□ -0.57
SLIRP-201ENST00000238688 OR2H1Q9GZK4 316 aa11.52□□□□□ -0.57
SLIRP-201ENST00000238688 FBLN5Q9UBX5 448 aa11.52□□□□□ -0.57
SLIRP-201ENST00000238688 AK6Q9Y3D8 172 aaKnown RBP11.52□□□□□ -0.57
SLIRP-201ENST00000238688 A0A1B0GTI1 187 aa11.51□□□□□ -0.57
SLIRP-201ENST00000238688 FIGNL2A6NMB9 653 aa11.51□□□□□ -0.57
SLIRP-201ENST00000238688 E9PLN8 166 aa11.51□□□□□ -0.57
SLIRP-201ENST00000238688 TBX1O43435 398 aa11.51□□□□□ -0.57
SLIRP-201ENST00000238688 XRCC2O43543 280 aa11.51□□□□□ -0.57
SLIRP-201ENST00000238688 DHRS3O75911 302 aa11.51□□□□□ -0.57
SLIRP-201ENST00000238688 MMP7P09237 267 aaPredicted RBP11.51□□□□□ -0.57
SLIRP-201ENST00000238688 ABOP16442 354 aa11.51□□□□□ -0.57
SLIRP-201ENST00000238688 ZNF20P17024 532 aa11.51□□□□□ -0.57
SLIRP-201ENST00000238688 ZNF32P17041 273 aa11.51□□□□□ -0.57
SLIRP-201ENST00000238688 RAB3AP20336 220 aa11.51□□□□□ -0.57
SLIRP-201ENST00000238688 BDKRB2P30411 391 aa11.51□□□□□ -0.57
SLIRP-201ENST00000238688 THBS4P35443 961 aa11.51□□□□□ -0.57
SLIRP-201ENST00000238688 GNALP38405 381 aa11.51□□□□□ -0.57
SLIRP-201ENST00000238688 CASP6P55212 293 aa11.51□□□□□ -0.57
SLIRP-201ENST00000238688 CAV3P56539 151 aa11.51□□□□□ -0.57
SLIRP-201ENST00000238688 OR10A3P58181 314 aa11.51□□□□□ -0.57
SLIRP-201ENST00000238688 RAB11BQ15907 218 aa11.51□□□□□ -0.57
SLIRP-201ENST00000238688 SLC25A35Q3KQZ1 300 aa11.51□□□□□ -0.57
SLIRP-201ENST00000238688 C1orf100Q5SVJ3 147 aa11.51□□□□□ -0.57
SLIRP-201ENST00000238688 FAM166AQ6J272 317 aa11.51□□□□□ -0.57
SLIRP-201ENST00000238688 DCDC5Q6ZRR9 648 aa11.51□□□□□ -0.57
SLIRP-201ENST00000238688 ZNF295-AS1Q8N0V1 137 aa11.51□□□□□ -0.57
SLIRP-201ENST00000238688 LRRC18Q8N456 261 aa11.51□□□□□ -0.57
SLIRP-201ENST00000238688 ACBD4Q8NC06 268 aa11.51□□□□□ -0.57
SLIRP-201ENST00000238688 OR51A4Q8NGJ6 313 aa11.51□□□□□ -0.57
SLIRP-201ENST00000238688 FAM57AQ8TBR7 257 aa11.51□□□□□ -0.57
SLIRP-201ENST00000238688 AKAP1Q92667 903 aaKnown RBP eCLIP11.51□□□□□ -0.57
SLIRP-201ENST00000238688 PPP1R14BQ96C90 147 aa11.51□□□□□ -0.57
SLIRP-201ENST00000238688 S100A16Q96FQ6 103 aaKnown RBP11.51□□□□□ -0.57
SLIRP-201ENST00000238688 COX4I2Q96KJ9 171 aa11.51□□□□□ -0.57
SLIRP-201ENST00000238688 VKORC1Q9BQB6 163 aa11.51□□□□□ -0.57
SLIRP-201ENST00000238688 LIN7BQ9HAP6 207 aa11.51□□□□□ -0.57
SLIRP-201ENST00000238688 PLEKHA1Q9HB21 404 aa11.51□□□□□ -0.57
SLIRP-201ENST00000238688 EXTL2Q9UBQ6 330 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms