RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 ZFP90Q8TF47 636 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 TMEM234Q8WY98 164 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 ZNF75CPQ92670 426 aaPredicted RBP2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 OSTF1Q92882 214 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 SLC35B4Q969S0 331 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 ROPN1LQ96C74 230 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 TEX37Q96LM6 180 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 WFIKKN1Q96NZ8 548 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 TRNT1Q96Q11 434 aaKnown RBP2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 RAB3IPQ96QF0 476 aaPredicted RBP2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 OR52E6Q96RD3 313 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 KLHDC3Q9BQ90 382 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 OVOL2Q9BRP0 275 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 GPATCH1Q9BRR8 931 aaKnown RBP2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 SLC39A3Q9BRY0 314 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 SLC35A5Q9BS91 424 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 SLC38A1Q9H2H9 487 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 OR51I1Q9H343 314 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 COQ10BQ9H8M1 238 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 MTHFD2LQ9H903 347 aaPredicted RBP2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 RNF121Q9H920 327 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 B3GAT2Q9NPZ5 323 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 TIGARQ9NQ88 270 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 ACER3Q9NUN7 267 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 THUMPD1Q9NXG2 353 aaKnown RBP2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 NDE1Q9NXR1 346 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 NKIRAS1Q9NYS0 192 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 ZNF226Q9NYT6 803 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 MARCOQ9UEW3 520 aaPredicted RBP2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 TRAPPC4Q9Y296 219 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 SLC35A3Q9Y2D2 325 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 WDR45Q9Y484 360 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 NF1P21359 2839 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 CR1P17927 2039 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 RTTNQ86VV8 2226 aa2.95□□□□□ -1.94
CKS1BP3-201ENST00000600888 DSPPQ9NZW4 1301 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 ZNF469Q96JG9 3925 aaPredicted RBP2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 ZANQ9Y493 2812 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 ABCA1O95477 2261 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 NPIPA5A0A0B4J1W7 369 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 A0A1W2PPR1 153 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 ZNF724A8MTY0 619 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 DEFB108AA8MXU0 73 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 EPM2AB3EWF7 344 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 NPIPA7E9PJI5 369 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 RFXANKO14593 260 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 TNFSF11O14788 317 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 UBDO15205 165 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 ZNF208O43345 1280 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 CYTIPO60759 359 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 GCM2O75603 506 aaPredicted RBP2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 SYNGR4O95473 234 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 H6PDO95479 791 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 CPSF4O95639 269 aaKnown RBP2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 KRT75O95678 551 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 NUDT14O95848 222 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 DBIP07108 87 aaKnown RBP2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 YES1P07947 543 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 QDPRP09417 244 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 TFPTP0C1Z6 253 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 NPIPA8P0DM63 369 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 SPP1P10451 314 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 AADACP22760 399 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 LOXP28300 417 aaPredicted RBP2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 SHC1P29353 583 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 SOAT1P35610 550 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 CDKN2CP42773 168 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 CDX1P47902 265 aaPredicted RBP2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 NPY4RP50391 375 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 CTBP2P56545 445 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 RIPPLY3P57055 190 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 KRTAP10-5P60370 271 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 H3F3AP84243 136 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 FADDQ13158 208 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 TNK1Q13470 666 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 GNA13Q14344 377 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 QPRTQ15274 297 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 MAPK11Q15759 364 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 TOMM34Q15785 309 aaPredicted RBP2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 MAPK14Q16539 360 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 DEFB113Q30KQ7 82 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 TMEM176BQ3YBM2 270 aaPredicted RBP2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 LBHQ53QV2 105 aaPredicted RBP2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 BEX5Q5H9J7 111 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 PRAMEF8Q5VWM4 474 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 PRAMEF7Q5VXH5 474 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 FAM166AQ6J272 317 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 ZNF343Q6P1L6 599 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 STAC2Q6ZMT1 411 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 ZNF621Q6ZSS3 439 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 TMPPEQ6ZT21 453 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 Q6ZT83 130 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 C16orf62Q7Z3J2 963 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 GRINAQ7Z429 371 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 KRT77Q7Z794 578 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 ZER1Q7Z7L7 766 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 RNF130Q86XS8 419 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 TGIF2LYQ8IUE0 185 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 PEX5LQ8IYB4 626 aa2.94□□□□□ -1.94
CKS1BP3-201ENST00000600888 GABRG1Q8N1C3 465 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 762.4 ms