RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 ART1P52961 327 aa8.27□□□□□ -1.09
LINC00838-201ENST00000562956 PITPNAQ00169 270 aa8.27□□□□□ -1.09
LINC00838-201ENST00000562956 CLN3Q13286 438 aa8.27□□□□□ -1.09
LINC00838-201ENST00000562956 SLC10A1Q14973 349 aa8.27□□□□□ -1.09
LINC00838-201ENST00000562956 RAB11BQ15907 218 aa8.27□□□□□ -1.09
LINC00838-201ENST00000562956 RSPO1Q2MKA7 263 aaPredicted RBP8.27□□□□□ -1.09
LINC00838-201ENST00000562956 SLC36A2Q495M3 483 aa8.27□□□□□ -1.09
LINC00838-201ENST00000562956 FAM27BQ5VT28 67 aa8.27□□□□□ -1.09
LINC00838-201ENST00000562956 FAM57BQ71RH2 274 aa8.27□□□□□ -1.09
LINC00838-201ENST00000562956 ASCL5Q7RTU5 278 aa8.27□□□□□ -1.09
LINC00838-201ENST00000562956 GPR137CQ8N3F9 429 aa8.27□□□□□ -1.09
LINC00838-201ENST00000562956 MEIOBQ8N635 442 aa8.27□□□□□ -1.09
LINC00838-201ENST00000562956 ZNF283Q8N7M2 679 aa8.27□□□□□ -1.09
LINC00838-201ENST00000562956 OR1J2Q8NGS2 313 aa8.27□□□□□ -1.09
LINC00838-201ENST00000562956 FNDC9Q8TBE3 224 aa8.27□□□□□ -1.09
LINC00838-201ENST00000562956 YIPF5Q969M3 257 aa8.27□□□□□ -1.09
LINC00838-201ENST00000562956 HAVCR1Q96D42 359 aa8.27□□□□□ -1.09
LINC00838-201ENST00000562956 C1QTNF6Q9BXI9 259 aa8.27□□□□□ -1.09
LINC00838-201ENST00000562956 DEFB127Q9H1M4 99 aa8.27□□□□□ -1.09
LINC00838-201ENST00000562956 MOB1AQ9H8S9 216 aa8.27□□□□□ -1.09
LINC00838-201ENST00000562956 RBFOX1Q9NWB1 397 aaKnown RBP8.27□□□□□ -1.09
LINC00838-201ENST00000562956 CGGBP1Q9UFW8 167 aaPredicted RBP8.27□□□□□ -1.09
LINC00838-201ENST00000562956 ETV7Q9Y603 341 aa8.27□□□□□ -1.09
LINC00838-201ENST00000562956 DCDC2BA2VCK2 349 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 TTLL8A6PVC2 850 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 SLC17A2O00624 439 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 IGHV3-9P01782 118 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 FAM157BP0CG42 384 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 CDK2P24941 298 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 CTSSP25774 331 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 PTH2RP49190 550 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 GLYATL3Q5SZD4 288 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 LAMTOR1Q6IAA8 161 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 PLET1Q6UQ28 207 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 BAIAP2L2Q6UXY1 529 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 ABHD12BQ7Z5M8 362 aaPredicted RBP8.26□□□□□ -1.09
LINC00838-201ENST00000562956 CPT1CQ8TCG5 803 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 SLC25A28Q96A46 364 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 S100A16Q96FQ6 103 aaKnown RBP8.26□□□□□ -1.09
LINC00838-201ENST00000562956 AUNIPQ9H7T9 357 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 ACKR4Q9NPB9 350 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 TMEM38BQ9NVV0 291 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 RIF1Q5UIP0 2472 aaKnown RBP8.26□□□□□ -1.09
LINC00838-201ENST00000562956 CNOT1A5YKK6 2376 aaKnown RBP8.26□□□□□ -1.09
LINC00838-201ENST00000562956 IGKV3D-15A0A087WSY6 115 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 F5H5K5 113 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 DBHP09172 617 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 PTHLHP12272 177 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 CTRB1P17538 263 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 M6PRP20645 277 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 GNALP38405 381 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 POU3F4P49335 361 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 PMP22Q01453 160 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 CEACAM16Q2WEN9 425 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 GFOD2Q3B7J2 385 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 C2orf76Q3KRA6 126 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 ELFN2Q5R3F8 820 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 CTRB2Q6GPI1 263 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 KRT74Q7RTS7 529 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 BIVMQ86UB2 503 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 COMMD2Q86X83 199 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 TUSC5Q8IXB3 177 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 RAB40AQ8WXH6 277 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 TMEM45BQ96B21 275 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 FAM3DQ96BQ1 224 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 GPR35Q9HC97 309 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 GPR84Q9NQS5 396 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 NOSIPQ9Y314 301 aaKnown RBP8.26□□□□□ -1.09
LINC00838-201ENST00000562956 PHF3Q92576 2039 aaKnown RBP8.26□□□□□ -1.09
LINC00838-201ENST00000562956 KIAA1549Q9HCM3 1950 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 A0A1B0GVI7 797 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 SYNGR4O95473 234 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 PATE4P0C8F1 98 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 CD37P11049 281 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 AP2S1P53680 142 aaPredicted RBP8.26□□□□□ -1.09
LINC00838-201ENST00000562956 TAGLNQ01995 201 aaKnown RBP8.26□□□□□ -1.09
LINC00838-201ENST00000562956 GPR176Q14439 515 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 DEFB109BQ30KR1 87 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 TMEM69Q5SWH9 247 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 GLT8D1Q68CQ7 371 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 MZT2BQ6NZ67 158 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 ZNF813Q6ZN06 617 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 TMEM178AQ8NBL3 297 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 SMIM4Q8WVI0 70 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 ZC4H2Q9NQZ6 224 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 PLEK2Q9NYT0 353 aa8.26□□□□□ -1.09
LINC00838-201ENST00000562956 PTPRBP23467 1997 aa8.25□□□□□ -1.09
LINC00838-201ENST00000562956 CTDSPLO15194 276 aa8.25□□□□□ -1.09
LINC00838-201ENST00000562956 GSTZ1O43708 216 aaPredicted RBP8.25□□□□□ -1.09
LINC00838-201ENST00000562956 MRPL33O75394 65 aaKnown RBP8.25□□□□□ -1.09
LINC00838-201ENST00000562956 ABOP16442 354 aa8.25□□□□□ -1.09
LINC00838-201ENST00000562956 HTR2CP28335 458 aa8.25□□□□□ -1.09
LINC00838-201ENST00000562956 SLC6A9P48067 706 aa8.25□□□□□ -1.09
LINC00838-201ENST00000562956 SCAND1P57086 179 aa8.25□□□□□ -1.09
LINC00838-201ENST00000562956 RTP5Q14D33 572 aa8.25□□□□□ -1.09
LINC00838-201ENST00000562956 RSPO4Q2I0M5 234 aaPredicted RBP8.25□□□□□ -1.09
LINC00838-201ENST00000562956 RIPPLY2Q5TAB7 128 aa8.25□□□□□ -1.09
LINC00838-201ENST00000562956 TSPO2Q5TGU0 170 aa8.25□□□□□ -1.09
LINC00838-201ENST00000562956 LYPD6Q86Y78 171 aa8.25□□□□□ -1.09
LINC00838-201ENST00000562956 JAGN1Q8N5M9 183 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms