RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 ALOX12BO75342 701 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 ZFPL1O95159 310 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 CD3DP04234 171 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 ITGB2P05107 769 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 NID1P14543 1247 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 MAOAP21397 527 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 CD34P28906 385 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 NANOS3P60323 173 aaKnown RBP4.71□□□□□ -1.66
PROM1-220ENST00000540805 YPEL5P62699 121 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 HSD11B2P80365 405 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 ZIC1Q15915 447 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 DUSP5Q16690 384 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 STEAP1BQ6NZ63 245 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 LEG1Q6P5S2 330 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 CDRT4Q8N9R6 151 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 DMBX1Q8NFW5 382 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 RPS4Y2Q8TD47 263 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 PAQR8Q8TEZ7 354 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 DVL3Q92997 716 aaPredicted RBP4.71□□□□□ -1.66
PROM1-220ENST00000540805 SEC22AQ96IW7 307 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 ARL5BQ96KC2 179 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 ZNF681Q96N22 645 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 SDF2Q99470 211 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 TREM1Q9NP99 234 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 STEAP1Q9UHE8 339 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 NOP16Q9Y3C1 178 aaKnown RBP4.71□□□□□ -1.66
PROM1-220ENST00000540805 SCN2AQ99250 2005 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 TRPM6Q9BX84 2022 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 SHANK1Q9Y566 2161 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 TRAV18A0A075B6X5 111 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 C13orf42A0A1B0GVH6 325 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 DCDC2BA2VCK2 349 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 NUDT19A8MXV4 375 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 C9JQL5 133 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 CCSO14618 274 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 FADS1O60427 444 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 DOK2O60496 412 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 TNFSF15O95150 251 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 GPR75O95800 540 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 PRH1P02810 166 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 MAS1P04201 325 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 F13BP05160 661 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 ADRA2CP18825 462 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 PRSS3P35030 304 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 DIO1P49895 249 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 GPR143P51810 404 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 PNLIPRP2P54317 469 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 SCAND1P57086 179 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 ACTBP60709 375 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 ACTG1P63261 375 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 DCDP81605 110 aaKnown RBP4.71□□□□□ -1.66
PROM1-220ENST00000540805 CEBPEQ15744 281 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 NKAIN1Q4KMZ8 207 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 KRBOX4Q5JUW0 171 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 PRAMEF17Q5VTA0 474 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 ADAM5Q6NVV9 412 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 C3orf33Q6P1S2 294 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 GTPBP8Q8N3Z3 284 aaPredicted RBP4.71□□□□□ -1.66
PROM1-220ENST00000540805 ZNF615Q8N8J6 731 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 LINC01555Q8NAE3 123 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 OR5AK2Q8NH90 309 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 NINJ1Q92982 152 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 CCDC74AQ96AQ1 378 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 SSX3Q99909 188 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 ZNF559Q9BR84 538 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 ZNF350Q9GZX5 532 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 PARP12Q9H0J9 701 aaKnown RBP4.71□□□□□ -1.66
PROM1-220ENST00000540805 ZNF442Q9H7R0 627 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 DYNLRB1Q9NP97 96 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 CLEC1BQ9P126 229 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 SERGEFQ9UGK8 458 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 CHRNA9Q9UGM1 479 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 MCTS1Q9ULC4 181 aaKnown RBP4.71□□□□□ -1.66
PROM1-220ENST00000540805 IER3IP1Q9Y5U9 82 aa4.71□□□□□ -1.66
PROM1-220ENST00000540805 IGKV1-8A0A0C4DH67 115 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 RNF222A6NCQ9 220 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 C1orf196B1AJZ1 125 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 NUDT21O43809 227 aaKnown RBP4.7□□□□□ -1.66
PROM1-220ENST00000540805 CTAG2O75638 210 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 NDUFB2O95178 105 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 CNOT4O95628 575 aaKnown RBP4.7□□□□□ -1.66
PROM1-220ENST00000540805 ARG1P05089 322 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 RPS4Y1P22090 263 aaKnown RBP4.7□□□□□ -1.66
PROM1-220ENST00000540805 AVPR2P30518 371 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 F2RL1P55085 397 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 GFERP55789 205 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 TAS2R19P59542 299 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 SSBP1Q04837 148 aaKnown RBP4.7□□□□□ -1.66
PROM1-220ENST00000540805 DPTQ07507 201 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 SURF2Q15527 256 aaPredicted RBP4.7□□□□□ -1.66
PROM1-220ENST00000540805 ELAVL1Q15717 326 aaKnown RBP4.7□□□□□ -1.66
PROM1-220ENST00000540805 USF2Q15853 346 aaPredicted RBP4.7□□□□□ -1.66
PROM1-220ENST00000540805 SLC35D3Q5M8T2 416 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 DCST2Q5T1A1 773 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 ZNF585AQ6P3V2 769 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 ANKRD16Q6P6B7 361 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 TRAPPC6BQ86SZ2 158 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 UEVLDQ8IX04 471 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 GABRG1Q8N1C3 465 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 SPEM1Q8N4L4 309 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms