RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 CCNOP22674 350 aa3.55□□□□□ -1.84
HMGB1P47-201ENST00000511281 MYL9P24844 172 aa3.55□□□□□ -1.84
HMGB1P47-201ENST00000511281 HTR1DP28221 377 aa3.55□□□□□ -1.84
HMGB1P47-201ENST00000511281 UBE2E1P51965 193 aa3.55□□□□□ -1.84
HMGB1P47-201ENST00000511281 UCNP55089 124 aa3.55□□□□□ -1.84
HMGB1P47-201ENST00000511281 SLC35B1P78383 322 aa3.55□□□□□ -1.84
HMGB1P47-201ENST00000511281 ATP6V1FQ16864 119 aa3.55□□□□□ -1.84
HMGB1P47-201ENST00000511281 C2orf83Q53S99 150 aa3.55□□□□□ -1.84
HMGB1P47-201ENST00000511281 LCE3CQ5T5A8 94 aa3.55□□□□□ -1.84
HMGB1P47-201ENST00000511281 ZNF530Q6P9A1 599 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P47-201ENST00000511281 CEMP1Q6PRD7 247 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P47-201ENST00000511281 SYS1Q8N2H4 156 aa3.55□□□□□ -1.84
HMGB1P47-201ENST00000511281 METTL13Q8N6R0 699 aa3.55□□□□□ -1.84
HMGB1P47-201ENST00000511281 OR10G6Q8NH81 332 aa3.55□□□□□ -1.84
HMGB1P47-201ENST00000511281 LRRC29Q8WV35 223 aa3.55□□□□□ -1.84
HMGB1P47-201ENST00000511281 ASZ1Q8WWH4 475 aa3.55□□□□□ -1.84
HMGB1P47-201ENST00000511281 HAUS1Q96CS2 278 aa3.55□□□□□ -1.84
HMGB1P47-201ENST00000511281 DYNLL2Q96FJ2 89 aa3.55□□□□□ -1.84
HMGB1P47-201ENST00000511281 FAM19A4Q96LR4 140 aa3.55□□□□□ -1.84
HMGB1P47-201ENST00000511281 UBE2E2Q96LR5 201 aa3.55□□□□□ -1.84
HMGB1P47-201ENST00000511281 GLT1D1Q96MS3 346 aa3.55□□□□□ -1.84
HMGB1P47-201ENST00000511281 SPNS1Q9H2V7 528 aa3.55□□□□□ -1.84
HMGB1P47-201ENST00000511281 IFI27L2Q9H2X8 130 aa3.55□□□□□ -1.84
HMGB1P47-201ENST00000511281 SYNDIG1Q9H7V2 258 aa3.55□□□□□ -1.84
HMGB1P47-201ENST00000511281 LHX9Q9NQ69 397 aa3.55□□□□□ -1.84
HMGB1P47-201ENST00000511281 ZNF331Q9NQX6 463 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P47-201ENST00000511281 STMN3Q9NZ72 180 aa3.55□□□□□ -1.84
HMGB1P47-201ENST00000511281 GGA2Q9UJY4 613 aa3.55□□□□□ -1.84
HMGB1P47-201ENST00000511281 CES1P1Q9UKY3 287 aa3.55□□□□□ -1.84
HMGB1P47-201ENST00000511281 PIK3R4Q99570 1358 aa3.54□□□□□ -1.84
HMGB1P47-201ENST00000511281 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P47-201ENST00000511281 A0A0A6YYD5 115 aa3.54□□□□□ -1.84
HMGB1P47-201ENST00000511281 IGHV5-10-1A0A0J9YXX1 117 aa3.54□□□□□ -1.84
HMGB1P47-201ENST00000511281 ERICH4A6NGS2 130 aa3.54□□□□□ -1.84
HMGB1P47-201ENST00000511281 H0Y9J4 135 aa3.54□□□□□ -1.84
HMGB1P47-201ENST00000511281 K7ERQ8 282 aa3.54□□□□□ -1.84
HMGB1P47-201ENST00000511281 PRMT5O14744 637 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P47-201ENST00000511281 GATCO43716 136 aaKnown RBP3.54□□□□□ -1.84
HMGB1P47-201ENST00000511281 ENTPD5O75356 428 aa3.54□□□□□ -1.84
HMGB1P47-201ENST00000511281 TRAPPC6AO75865 159 aa3.54□□□□□ -1.84
HMGB1P47-201ENST00000511281 TLX1NBP0CAT3 122 aa3.54□□□□□ -1.84
HMGB1P47-201ENST00000511281 PSG2P11465 335 aa3.54□□□□□ -1.84
HMGB1P47-201ENST00000511281 RBM34P42696 430 aaKnown RBP3.54□□□□□ -1.84
HMGB1P47-201ENST00000511281 CCR6P51684 374 aa3.54□□□□□ -1.84
HMGB1P47-201ENST00000511281 MNAT1P51948 309 aa3.54□□□□□ -1.84
HMGB1P47-201ENST00000511281 TAS2R60P59551 318 aa3.54□□□□□ -1.84
HMGB1P47-201ENST00000511281 KRTAP10-6P60371 365 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P47-201ENST00000511281 DGCR6Q14129 220 aa3.54□□□□□ -1.84
HMGB1P47-201ENST00000511281 NDUFAF7Q7L592 441 aa3.54□□□□□ -1.84
HMGB1P47-201ENST00000511281 MKXQ8IYA7 352 aa3.54□□□□□ -1.84
HMGB1P47-201ENST00000511281 ZNF433Q8N7K0 673 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P47-201ENST00000511281 WDR31Q8NA23 367 aa3.54□□□□□ -1.84
HMGB1P47-201ENST00000511281 OR10Z1Q8NGY1 313 aa3.54□□□□□ -1.84
HMGB1P47-201ENST00000511281 LRRC20Q8TCA0 184 aa3.54□□□□□ -1.84
HMGB1P47-201ENST00000511281 SRSF12Q8WXF0 261 aaKnown RBP3.54□□□□□ -1.84
HMGB1P47-201ENST00000511281 ZNF799Q96GE5 643 aa3.54□□□□□ -1.84
HMGB1P47-201ENST00000511281 SLIRPQ9GZT3 109 aaKnown RBP3.54□□□□□ -1.84
HMGB1P47-201ENST00000511281 SYT4Q9H2B2 425 aa3.54□□□□□ -1.84
HMGB1P47-201ENST00000511281 TPK1Q9H3S4 243 aa3.54□□□□□ -1.84
HMGB1P47-201ENST00000511281 ZNF302Q9NR11 478 aa3.54□□□□□ -1.84
HMGB1P47-201ENST00000511281 RGS18Q9NS28 235 aa3.54□□□□□ -1.84
HMGB1P47-201ENST00000511281 ADAMTS13Q76LX8 1427 aa3.53□□□□□ -1.84
HMGB1P47-201ENST00000511281 CDC42BPBQ9Y5S2 1711 aa3.53□□□□□ -1.84
HMGB1P47-201ENST00000511281 LRP4O75096 1905 aa3.53□□□□□ -1.84
HMGB1P47-201ENST00000511281 A0A096LNJ9 63 aa3.53□□□□□ -1.84
HMGB1P47-201ENST00000511281 IGKV1-8A0A0C4DH67 115 aa3.53□□□□□ -1.84
HMGB1P47-201ENST00000511281 A0A0U1RQV1 116 aa3.53□□□□□ -1.84
HMGB1P47-201ENST00000511281 GCGP01275 180 aa3.53□□□□□ -1.84
HMGB1P47-201ENST00000511281 SSTR5P35346 364 aa3.53□□□□□ -1.84
HMGB1P47-201ENST00000511281 CD151P48509 253 aa3.53□□□□□ -1.84
HMGB1P47-201ENST00000511281 KCNJ3P48549 501 aa3.53□□□□□ -1.84
HMGB1P47-201ENST00000511281 RAB7AP51149 207 aa3.53□□□□□ -1.84
HMGB1P47-201ENST00000511281 PSG3Q16557 428 aa3.53□□□□□ -1.84
HMGB1P47-201ENST00000511281 CPTPQ5TA50 214 aa3.53□□□□□ -1.84
HMGB1P47-201ENST00000511281 APOBEC3HQ6NTF7 200 aaKnown RBP3.53□□□□□ -1.84
HMGB1P47-201ENST00000511281 SNX20Q7Z614 316 aa3.53□□□□□ -1.84
HMGB1P47-201ENST00000511281 RAB43Q86YS6 212 aa3.53□□□□□ -1.84
HMGB1P47-201ENST00000511281 RBM45Q8IUH3 476 aaKnown RBP3.53□□□□□ -1.84
HMGB1P47-201ENST00000511281 PRSS58Q8IYP2 241 aa3.53□□□□□ -1.84
HMGB1P47-201ENST00000511281 ARIH2OSQ8N7S6 290 aa3.53□□□□□ -1.84
HMGB1P47-201ENST00000511281 PIFOQ8TCI5 191 aa3.53□□□□□ -1.84
HMGB1P47-201ENST00000511281 CENPNQ96H22 339 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P47-201ENST00000511281 RNF170Q96K19 258 aa3.53□□□□□ -1.84
HMGB1P47-201ENST00000511281 TOLLIPQ9H0E2 274 aa3.53□□□□□ -1.84
HMGB1P47-201ENST00000511281 OR51B5Q9H339 312 aa3.53□□□□□ -1.84
HMGB1P47-201ENST00000511281 ZNF442Q9H7R0 627 aa3.53□□□□□ -1.84
HMGB1P47-201ENST00000511281 EDA2RQ9HAV5 297 aa3.53□□□□□ -1.84
HMGB1P47-201ENST00000511281 MYOZ1Q9NP98 299 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P47-201ENST00000511281 RRAGDQ9NQL2 400 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P47-201ENST00000511281 NYAP2Q9P242 653 aa3.53□□□□□ -1.84
HMGB1P47-201ENST00000511281 CTSFQ9UBX1 484 aa3.53□□□□□ -1.84
HMGB1P47-201ENST00000511281 OR12D3Q9UGF7 316 aa3.53□□□□□ -1.84
HMGB1P47-201ENST00000511281 RBMX2Q9Y388 322 aaKnown RBP3.53□□□□□ -1.84
HMGB1P47-201ENST00000511281 UBIAD1Q9Y5Z9 338 aa3.53□□□□□ -1.84
HMGB1P47-201ENST00000511281 WSB1Q9Y6I7 421 aa3.53□□□□□ -1.84
HMGB1P47-201ENST00000511281 IGHV1-69DA0A0B4J2H0 117 aa3.52□□□□□ -1.85
HMGB1P47-201ENST00000511281 LINC01619G3V211 115 aa3.52□□□□□ -1.85
HMGB1P47-201ENST00000511281 DFFAO00273 331 aa3.52□□□□□ -1.85
HMGB1P47-201ENST00000511281 TAAR5O14804 337 aa3.52□□□□□ -1.85
HMGB1P47-201ENST00000511281 ANGPTL7O43827 346 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms