RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 CLUP10909 449 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 TPT1P13693 172 aaKnown RBP3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 ABOP16442 354 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 CXCL3P19876 107 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 CCR1P32246 355 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 BTCP35070 178 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 PMELP40967 661 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 TNFSF9P41273 254 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 PTGFRP43088 359 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 CSNK1EP49674 416 aaKnown RBP3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 SMSP52788 366 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 CDKN2DP55273 166 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 XGP55808 180 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 CLDN8P56748 225 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 RAB8AP61006 207 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 RPS25P62851 125 aaKnown RBP3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 FKBP1BP68106 108 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 FABP9Q0Z7S8 132 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 ILKQ13418 452 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 SNTB2Q13425 540 aaKnown RBP3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 TRA2AQ13595 282 aaKnown RBP eCLIP3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 GRB14Q14449 540 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 PTGES3Q15185 160 aaKnown RBP3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 USF2Q15853 346 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 MAPK14Q16539 360 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 SGCBQ16585 318 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 DUSP5Q16690 384 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 ZNF630Q2M218 657 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 DCAF4L1Q3SXM0 396 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 GGTA1PQ4G0N0 100 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 UBE2NLQ5JXB2 153 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 SLC25A30Q5SVS4 291 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 PRAMEF8Q5VWM4 474 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 OLFML2AQ68BL7 652 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 C12orf73Q69YU5 71 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 TRIM40Q6P9F5 258 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 ZNF613Q6PF04 617 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 DOK6Q6PKX4 331 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 SIGLEC15Q6ZMC9 328 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 HIST2H3AQ71DI3 136 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 ABHD13Q7L211 337 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 SSX6Q7RTT6 188 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 GOLGA7Q7Z5G4 137 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 C5orf24Q7Z6I8 188 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 ZNF329Q86UD4 541 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 TAC4Q86UU9 113 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 PARGQ86W56 976 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 GPR65Q8IYL9 337 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 PUSL1Q8N0Z8 303 aaKnown RBP3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 LRRC52Q8N7C0 313 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 RNF149Q8NC42 400 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 TMEM185AQ8NFB2 350 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 BPIFCQ8NFQ6 507 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 TERB2Q8NHR7 220 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 TRMT10AQ8TBZ6 339 aaKnown RBP3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 ST7LQ8TDW4 575 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 UBTD2Q8WUN7 234 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 EEF1AKMT1Q8WVE0 214 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 HIST1H2ACQ93077 130 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 PNPLA2Q96AD5 504 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 SMARCD1Q96GM5 515 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 C2orf48Q96LS8 159 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 C12orf66Q96MD2 445 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 ASCL2Q99929 193 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 CMSS1Q9BQ75 279 aaKnown RBP3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 FAIM2Q9BWQ8 316 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 CLEC7AQ9BXN2 247 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 CHIAQ9BZP6 476 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 MFFQ9GZY8 342 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 SLC25A51Q9H1U9 297 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 OR51V1Q9H2C8 321 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 SLC25A19Q9HC21 320 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 FGF22Q9HCT0 170 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 MMP26Q9NRE1 261 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 TAS2R8Q9NYW2 309 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 SLC25A37Q9NYZ2 338 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 COX16Q9P0S2 106 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 GHRLQ9UBU3 117 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 OPN4Q9UHM6 478 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 PPP1R3CQ9UQK1 317 aa3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 RPH3AQ9Y2J0 694 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 MRPS28Q9Y2Q9 187 aaKnown RBP3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 COL16A1Q07092 1604 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P16-201ENST00000447155 DSPPQ9NZW4 1301 aa3.76□□□□□ -1.81
HMGB1P16-201ENST00000447155 UBR3Q6ZT12 1888 aa3.76□□□□□ -1.81
HMGB1P16-201ENST00000447155 C9orf170A2RU37 121 aa3.76□□□□□ -1.81
HMGB1P16-201ENST00000447155 GLTPD2A6NH11 291 aa3.76□□□□□ -1.81
HMGB1P16-201ENST00000447155 EFCAB7A8K855 629 aa3.76□□□□□ -1.81
HMGB1P16-201ENST00000447155 LGALS8O00214 317 aa3.76□□□□□ -1.81
HMGB1P16-201ENST00000447155 GABRPO00591 440 aa3.76□□□□□ -1.81
HMGB1P16-201ENST00000447155 ARPC1BO15143 372 aaKnown RBP3.76□□□□□ -1.81
HMGB1P16-201ENST00000447155 TCAPO15273 167 aa3.76□□□□□ -1.81
HMGB1P16-201ENST00000447155 GALR3O60755 368 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P16-201ENST00000447155 DNAJB6O75190 326 aa3.76□□□□□ -1.81
HMGB1P16-201ENST00000447155 RBBP9O75884 186 aa3.76□□□□□ -1.81
HMGB1P16-201ENST00000447155 ARL6IP5O75915 188 aa3.76□□□□□ -1.81
HMGB1P16-201ENST00000447155 OR2A4O95047 310 aa3.76□□□□□ -1.81
HMGB1P16-201ENST00000447155 AK1P00568 194 aa3.76□□□□□ -1.81
HMGB1P16-201ENST00000447155 HLA-DQB2P05538 268 aa3.76□□□□□ -1.81
HMGB1P16-201ENST00000447155 CRYBA1P05813 215 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms