RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 TEX47Q8TBZ9 253 aa12.23□□□□□ -0.45
NIF3L1-205ENST00000409588 Q8TCH9 128 aa12.23□□□□□ -0.45
NIF3L1-205ENST00000409588 SLCO4A1Q96BD0 722 aa12.23□□□□□ -0.45
NIF3L1-205ENST00000409588 PLEKHA8Q96JA3 519 aa12.23□□□□□ -0.45
NIF3L1-205ENST00000409588 FEVQ99581 238 aa12.23□□□□□ -0.45
NIF3L1-205ENST00000409588 THTPAQ9BU02 230 aa12.23□□□□□ -0.45
NIF3L1-205ENST00000409588 SUCNR1Q9BXA5 334 aa12.23□□□□□ -0.45
NIF3L1-205ENST00000409588 FN3KQ9H479 309 aa12.23□□□□□ -0.45
NIF3L1-205ENST00000409588 ZNF556Q9HAH1 456 aa12.23□□□□□ -0.45
NIF3L1-205ENST00000409588 NTN4Q9HB63 628 aa12.23□□□□□ -0.45
NIF3L1-205ENST00000409588 MRPL15Q9P015 296 aaKnown RBP12.23□□□□□ -0.45
NIF3L1-205ENST00000409588 DYSFO75923 2080 aa12.23□□□□□ -0.45
NIF3L1-205ENST00000409588 TANC2Q9HCD6 1990 aa12.22□□□□□ -0.45
NIF3L1-205ENST00000409588 DHRS12A0PJE2 317 aa12.22□□□□□ -0.45
NIF3L1-205ENST00000409588 ZNF878C9JN71 531 aa12.22□□□□□ -0.45
NIF3L1-205ENST00000409588 F5H0A9 414 aaPredicted RBP12.22□□□□□ -0.45
NIF3L1-205ENST00000409588 XRCC2O43543 280 aa12.22□□□□□ -0.45
NIF3L1-205ENST00000409588 WNT2P09544 360 aa12.22□□□□□ -0.45
NIF3L1-205ENST00000409588 PPIAL4GP0DN37 164 aa12.22□□□□□ -0.45
NIF3L1-205ENST00000409588 ANXA8P13928 327 aa12.22□□□□□ -0.45
NIF3L1-205ENST00000409588 SPI1P17947 270 aa12.22□□□□□ -0.45
NIF3L1-205ENST00000409588 ADRA2CP18825 462 aa12.22□□□□□ -0.45
NIF3L1-205ENST00000409588 EPHA1P21709 976 aa12.22□□□□□ -0.45
NIF3L1-205ENST00000409588 CFL1P23528 166 aaKnown RBP12.22□□□□□ -0.45
NIF3L1-205ENST00000409588 PYCR1P32322 319 aa12.22□□□□□ -0.45
NIF3L1-205ENST00000409588 GRK5P34947 590 aa12.22□□□□□ -0.45
NIF3L1-205ENST00000409588 ERFP50548 548 aa12.22□□□□□ -0.45
NIF3L1-205ENST00000409588 LCN2P80188 198 aa12.22□□□□□ -0.45
NIF3L1-205ENST00000409588 CRMP1Q14194 572 aa12.22□□□□□ -0.45
NIF3L1-205ENST00000409588 KCNJ8Q15842 424 aa12.22□□□□□ -0.45
NIF3L1-205ENST00000409588 SNCBQ16143 134 aa12.22□□□□□ -0.45
NIF3L1-205ENST00000409588 C1orf229Q6ZS94 237 aaPredicted RBP12.22□□□□□ -0.45
NIF3L1-205ENST00000409588 NAA40Q86UY6 237 aa12.22□□□□□ -0.45
NIF3L1-205ENST00000409588 ITFG2Q969R8 447 aa12.22□□□□□ -0.45
NIF3L1-205ENST00000409588 TMEM165Q9HC07 324 aa12.22□□□□□ -0.45
NIF3L1-205ENST00000409588 TRIM36Q9NQ86 728 aa12.22□□□□□ -0.45
NIF3L1-205ENST00000409588 COMMD3-BMI1R4GMX3 469 aa12.22□□□□□ -0.45
NIF3L1-205ENST00000409588 TVP23AA6NH52 213 aa12.21□□□□□ -0.45
NIF3L1-205ENST00000409588 CD300LBA8K4G0 201 aa12.21□□□□□ -0.45
NIF3L1-205ENST00000409588 H3BN98 237 aa12.21□□□□□ -0.45
NIF3L1-205ENST00000409588 TRIM77I1YAP6 450 aa12.21□□□□□ -0.45
NIF3L1-205ENST00000409588 MLNRO43193 412 aa12.21□□□□□ -0.45
NIF3L1-205ENST00000409588 NDUFA2O43678 99 aa12.21□□□□□ -0.45
NIF3L1-205ENST00000409588 PTBP3O95758 552 aaKnown RBP12.21□□□□□ -0.45
NIF3L1-205ENST00000409588 ZFP36P26651 326 aaKnown RBP12.21□□□□□ -0.45
NIF3L1-205ENST00000409588 HILS1P60008 231 aa12.21□□□□□ -0.45
NIF3L1-205ENST00000409588 NLRC3Q7RTR2 1065 aa12.21□□□□□ -0.45
NIF3L1-205ENST00000409588 ADGRG5Q8IZF4 528 aa12.21□□□□□ -0.45
NIF3L1-205ENST00000409588 BHLHE23Q8NDY6 225 aa12.21□□□□□ -0.45
NIF3L1-205ENST00000409588 OR10AD1Q8NGE0 317 aa12.21□□□□□ -0.45
NIF3L1-205ENST00000409588 OR52H1Q8NGJ2 320 aa12.21□□□□□ -0.45
NIF3L1-205ENST00000409588 OR10S1Q8NGN2 331 aa12.21□□□□□ -0.45
NIF3L1-205ENST00000409588 OR4Q3Q8NH05 313 aa12.21□□□□□ -0.45
NIF3L1-205ENST00000409588 BCAS4Q8TDM0 211 aa12.21□□□□□ -0.45
NIF3L1-205ENST00000409588 CANT1Q8WVQ1 401 aa12.21□□□□□ -0.45
NIF3L1-205ENST00000409588 DNAJC9Q8WXX5 260 aa12.21□□□□□ -0.45
NIF3L1-205ENST00000409588 SPSB4Q96A44 273 aa12.21□□□□□ -0.45
NIF3L1-205ENST00000409588 CCDC124Q96CT7 223 aaKnown RBP12.21□□□□□ -0.45
NIF3L1-205ENST00000409588 SLAMF6Q96DU3 332 aa12.21□□□□□ -0.45
NIF3L1-205ENST00000409588 NRBF2Q96F24 287 aa12.21□□□□□ -0.45
NIF3L1-205ENST00000409588 COPS4Q9BT78 406 aa12.21□□□□□ -0.45
NIF3L1-205ENST00000409588 MRI1Q9BV20 369 aa12.21□□□□□ -0.45
NIF3L1-205ENST00000409588 WDR76Q9H967 626 aa12.21□□□□□ -0.45
NIF3L1-205ENST00000409588 MARCH7Q9H992 704 aa12.21□□□□□ -0.45
NIF3L1-205ENST00000409588 PPIAL4AQ9Y536 164 aa12.21□□□□□ -0.45
NIF3L1-205ENST00000409588 LOC105371242A0A075B767 164 aa12.2□□□□□ -0.46
NIF3L1-205ENST00000409588 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.2□□□□□ -0.46
NIF3L1-205ENST00000409588 GGT3PA6NGU5 568 aa12.2□□□□□ -0.46
NIF3L1-205ENST00000409588 F5H5P2 479 aa12.2□□□□□ -0.46
NIF3L1-205ENST00000409588 H0YL77 283 aa12.2□□□□□ -0.46
NIF3L1-205ENST00000409588 GLCEO94923 617 aa12.2□□□□□ -0.46
NIF3L1-205ENST00000409588 SPARCP09486 303 aa12.2□□□□□ -0.46
NIF3L1-205ENST00000409588 ZNF12P17014 697 aa12.2□□□□□ -0.46
NIF3L1-205ENST00000409588 GSTT1P30711 240 aa12.2□□□□□ -0.46
NIF3L1-205ENST00000409588 NPY4RP50391 375 aa12.2□□□□□ -0.46
NIF3L1-205ENST00000409588 PPP1R8Q12972 351 aaKnown RBP12.2□□□□□ -0.46
NIF3L1-205ENST00000409588 ZNF154Q13106 437 aa12.2□□□□□ -0.46
NIF3L1-205ENST00000409588 MAB21L1Q13394 359 aa12.2□□□□□ -0.46
NIF3L1-205ENST00000409588 OR8G1Q15617 311 aa12.2□□□□□ -0.46
NIF3L1-205ENST00000409588 C11orf91Q3C1V1 193 aa12.2□□□□□ -0.46
NIF3L1-205ENST00000409588 LRRN1Q6UXK5 716 aa12.2□□□□□ -0.46
NIF3L1-205ENST00000409588 MOGAT3Q86VF5 341 aa12.2□□□□□ -0.46
NIF3L1-205ENST00000409588 ZNF511Q8NB15 262 aa12.2□□□□□ -0.46
NIF3L1-205ENST00000409588 OR51L1Q8NGJ5 315 aa12.2□□□□□ -0.46
NIF3L1-205ENST00000409588 OR9Q1Q8NGQ5 310 aa12.2□□□□□ -0.46
NIF3L1-205ENST00000409588 OR6K6Q8NGW6 343 aa12.2□□□□□ -0.46
NIF3L1-205ENST00000409588 FAM216AQ8WUB2 273 aa12.2□□□□□ -0.46
NIF3L1-205ENST00000409588 ZNRF4Q8WWF5 429 aa12.2□□□□□ -0.46
NIF3L1-205ENST00000409588 INTS14Q96SY0 518 aa12.2□□□□□ -0.46
NIF3L1-205ENST00000409588 NIPSNAP1Q9BPW8 284 aa12.2□□□□□ -0.46
NIF3L1-205ENST00000409588 RGCCQ9H4X1 137 aa12.2□□□□□ -0.46
NIF3L1-205ENST00000409588 FN3KRPQ9HA64 309 aa12.2□□□□□ -0.46
NIF3L1-205ENST00000409588 CENPMQ9NSP4 180 aa12.2□□□□□ -0.46
NIF3L1-205ENST00000409588 ARMC1Q9NVT9 282 aa12.2□□□□□ -0.46
NIF3L1-205ENST00000409588 C14orf119Q9NWQ9 140 aa12.2□□□□□ -0.46
NIF3L1-205ENST00000409588 FAM53CQ9NYF3 392 aa12.2□□□□□ -0.46
NIF3L1-205ENST00000409588 DNAJB9Q9UBS3 223 aa12.2□□□□□ -0.46
NIF3L1-205ENST00000409588 OR5V1Q9UGF6 321 aa12.2□□□□□ -0.46
NIF3L1-205ENST00000409588 OPN4Q9UHM6 478 aa12.2□□□□□ -0.46
NIF3L1-205ENST00000409588 INSIG2Q9Y5U4 225 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms