RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 PRORSD1PA6NEY8 169 aa11.32□□□□□ -0.6
SNX1-214ENST00000625244 ADAM20O43506 726 aa11.32□□□□□ -0.6
SNX1-214ENST00000625244 TPST1O60507 370 aa11.32□□□□□ -0.6
SNX1-214ENST00000625244 IRF2P14316 349 aa11.32□□□□□ -0.6
SNX1-214ENST00000625244 ETS2P15036 469 aa11.32□□□□□ -0.6
SNX1-214ENST00000625244 CALB2P22676 271 aa11.32□□□□□ -0.6
SNX1-214ENST00000625244 PRKAR1BP31321 381 aa11.32□□□□□ -0.6
SNX1-214ENST00000625244 FMODQ06828 376 aa11.32□□□□□ -0.6
SNX1-214ENST00000625244 KLRD1Q13241 179 aa11.32□□□□□ -0.6
SNX1-214ENST00000625244 SELPLGQ14242 412 aa11.32□□□□□ -0.6
SNX1-214ENST00000625244 CLEC12AQ5QGZ9 265 aa11.32□□□□□ -0.6
SNX1-214ENST00000625244 SFRP4Q6FHJ7 346 aaPredicted RBP11.32□□□□□ -0.6
SNX1-214ENST00000625244 OR2T2Q6IF00 324 aa11.32□□□□□ -0.6
SNX1-214ENST00000625244 METAP1DQ6UB28 335 aaPredicted RBP11.32□□□□□ -0.6
SNX1-214ENST00000625244 TRPM8Q7Z2W7 1104 aa11.32□□□□□ -0.6
SNX1-214ENST00000625244 PATL1Q86TB9 770 aaKnown RBP11.32□□□□□ -0.6
SNX1-214ENST00000625244 RANBP3LQ86VV4 465 aaPredicted RBP11.32□□□□□ -0.6
SNX1-214ENST00000625244 OR8G5Q8NG78 346 aa11.32□□□□□ -0.6
SNX1-214ENST00000625244 ASB10Q8WXI3 467 aa11.32□□□□□ -0.6
SNX1-214ENST00000625244 NMD3Q96D46 503 aaKnown RBP11.32□□□□□ -0.6
SNX1-214ENST00000625244 NSL1Q96IY1 281 aa11.32□□□□□ -0.6
SNX1-214ENST00000625244 TMEM27Q9HBJ8 222 aa11.32□□□□□ -0.6
SNX1-214ENST00000625244 ELOVL7A1L3X0 281 aa11.31□□□□□ -0.6
SNX1-214ENST00000625244 MEIOCA2RUB1 952 aa11.31□□□□□ -0.6
SNX1-214ENST00000625244 FAM220BPB1ANY3 271 aa11.31□□□□□ -0.6
SNX1-214ENST00000625244 CENPBD1B2RD01 187 aa11.31□□□□□ -0.6
SNX1-214ENST00000625244 GSTA4O15217 222 aa11.31□□□□□ -0.6
SNX1-214ENST00000625244 FAM20BO75063 409 aa11.31□□□□□ -0.6
SNX1-214ENST00000625244 GMNNO75496 209 aa11.31□□□□□ -0.6
SNX1-214ENST00000625244 IFNA14P01570 189 aa11.31□□□□□ -0.6
SNX1-214ENST00000625244 CST2P09228 141 aa11.31□□□□□ -0.6
SNX1-214ENST00000625244 RAC2P15153 192 aa11.31□□□□□ -0.6
SNX1-214ENST00000625244 ACADSP16219 412 aa11.31□□□□□ -0.6
SNX1-214ENST00000625244 ZNF26P17031 533 aaPredicted RBP11.31□□□□□ -0.6
SNX1-214ENST00000625244 EEF1B2P24534 225 aaKnown RBP11.31□□□□□ -0.6
SNX1-214ENST00000625244 AQP1P29972 269 aa11.31□□□□□ -0.6
SNX1-214ENST00000625244 SAA4P35542 130 aa11.31□□□□□ -0.6
SNX1-214ENST00000625244 GATA4P43694 442 aa11.31□□□□□ -0.6
SNX1-214ENST00000625244 SLC7A2P52569 658 aa11.31□□□□□ -0.6
SNX1-214ENST00000625244 PSME3P61289 254 aa11.31□□□□□ -0.6
SNX1-214ENST00000625244 VMACQ2NL98 169 aa11.31□□□□□ -0.6
SNX1-214ENST00000625244 LINC00114Q6XXX2 140 aa11.31□□□□□ -0.6
SNX1-214ENST00000625244 ARMC8Q8IUR7 673 aa11.31□□□□□ -0.6
SNX1-214ENST00000625244 C10orf111Q8N326 155 aa11.31□□□□□ -0.6
SNX1-214ENST00000625244 FGFRL1Q8N441 504 aa11.31□□□□□ -0.6
SNX1-214ENST00000625244 OR2T12Q8NG77 320 aa11.31□□□□□ -0.6
SNX1-214ENST00000625244 Q8TCH9 128 aa11.31□□□□□ -0.6
SNX1-214ENST00000625244 C17orf50Q8WW18 174 aa11.31□□□□□ -0.6
SNX1-214ENST00000625244 RASSF5Q8WWW0 418 aa11.31□□□□□ -0.6
SNX1-214ENST00000625244 MAP6Q96JE9 813 aa11.31□□□□□ -0.6
SNX1-214ENST00000625244 SSX3Q99909 188 aa11.31□□□□□ -0.6
SNX1-214ENST00000625244 ZNF702PQ9H963 129 aa11.31□□□□□ -0.6
SNX1-214ENST00000625244 NANSQ9NR45 359 aa11.31□□□□□ -0.6
SNX1-214ENST00000625244 C20orf141Q9NUB4 165 aa11.31□□□□□ -0.6
SNX1-214ENST00000625244 ARL8BQ9NVJ2 186 aa11.31□□□□□ -0.6
SNX1-214ENST00000625244 ADA2Q9NZK5 511 aa11.31□□□□□ -0.6
SNX1-214ENST00000625244 ONECUT1Q9UBC0 465 aa11.31□□□□□ -0.6
SNX1-214ENST00000625244 NDRG4Q9ULP0 352 aaKnown RBP11.31□□□□□ -0.6
SNX1-214ENST00000625244 MCIDASD6RGH6 385 aa11.3□□□□□ -0.6
SNX1-214ENST00000625244 CHST1O43916 411 aa11.3□□□□□ -0.6
SNX1-214ENST00000625244 HLA-DPB1P04440 258 aa11.3□□□□□ -0.6
SNX1-214ENST00000625244 NCALDP61601 193 aa11.3□□□□□ -0.6
SNX1-214ENST00000625244 GUCA2AQ02747 115 aa11.3□□□□□ -0.6
SNX1-214ENST00000625244 MAB21L1Q13394 359 aa11.3□□□□□ -0.6
SNX1-214ENST00000625244 C1orf94Q6P1W5 598 aa11.3□□□□□ -0.6
SNX1-214ENST00000625244 PGAM4Q8N0Y7 254 aa11.3□□□□□ -0.6
SNX1-214ENST00000625244 BEND2Q8NDZ0 799 aa11.3□□□□□ -0.6
SNX1-214ENST00000625244 RORBQ92753 470 aa11.3□□□□□ -0.6
SNX1-214ENST00000625244 KCTD14Q9BQ13 255 aaPredicted RBP11.3□□□□□ -0.6
SNX1-214ENST00000625244 PCDHAC1Q9H158 963 aa11.3□□□□□ -0.6
SNX1-214ENST00000625244 BLOC1S5-TXNDC5H3BN57 136 aa11.29□□□□□ -0.6
SNX1-214ENST00000625244 LGALS8O00214 317 aa11.29□□□□□ -0.6
SNX1-214ENST00000625244 DVL1O14640 695 aa11.29□□□□□ -0.6
SNX1-214ENST00000625244 DUS4LO95620 317 aaKnown RBP11.29□□□□□ -0.6
SNX1-214ENST00000625244 ECDO95905 644 aaPredicted RBP11.29□□□□□ -0.6
SNX1-214ENST00000625244 ASAH2BP0C7U1 165 aa11.29□□□□□ -0.6
SNX1-214ENST00000625244 PF4V1P10720 104 aa11.29□□□□□ -0.6
SNX1-214ENST00000625244 UGT2B15P54855 530 aa11.29□□□□□ -0.6
SNX1-214ENST00000625244 PCBD1P61457 104 aa11.29□□□□□ -0.6
SNX1-214ENST00000625244 LIPEQ05469 1076 aa11.29□□□□□ -0.6
SNX1-214ENST00000625244 DCTN2Q13561 401 aaKnown RBP11.29□□□□□ -0.6
SNX1-214ENST00000625244 ENDOGQ14249 297 aaKnown RBP11.29□□□□□ -0.6
SNX1-214ENST00000625244 MPPED2Q15777 294 aa11.29□□□□□ -0.6
SNX1-214ENST00000625244 SWT1Q5T5J6 900 aaKnown RBP11.29□□□□□ -0.6
SNX1-214ENST00000625244 DHRS4L2Q6PKH6 230 aa11.29□□□□□ -0.6
SNX1-214ENST00000625244 SLC25A47Q6Q0C1 308 aa11.29□□□□□ -0.6
SNX1-214ENST00000625244 SLC15A3Q8IY34 581 aa11.29□□□□□ -0.6
SNX1-214ENST00000625244 MICU2Q8IYU8 434 aa11.29□□□□□ -0.6
SNX1-214ENST00000625244 BOLLQ8N9W6 283 aaKnown RBP11.29□□□□□ -0.6
SNX1-214ENST00000625244 BHLHE23Q8NDY6 225 aa11.29□□□□□ -0.6
SNX1-214ENST00000625244 OR11L1Q8NGX0 322 aa11.29□□□□□ -0.6
SNX1-214ENST00000625244 SLC7A6Q92536 515 aa11.29□□□□□ -0.6
SNX1-214ENST00000625244 HDAC2Q92769 488 aaKnown RBP11.29□□□□□ -0.6
SNX1-214ENST00000625244 ZNF582Q96NG8 517 aaPredicted RBP11.29□□□□□ -0.6
SNX1-214ENST00000625244 DDOQ99489 341 aa11.29□□□□□ -0.6
SNX1-214ENST00000625244 NKX3-1Q99801 234 aaPredicted RBP11.29□□□□□ -0.6
SNX1-214ENST00000625244 NPFFR1Q9GZQ6 430 aa11.29□□□□□ -0.6
SNX1-214ENST00000625244 EVA1AQ9H8M9 152 aa11.29□□□□□ -0.6
SNX1-214ENST00000625244 SMURF2Q9HAU4 748 aa11.29□□□□□ -0.6
SNX1-214ENST00000625244 INPP5EQ9NRR6 644 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms