RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 JAM3Q9BX67 310 aa11.21□□□□□ -0.61
PABPC1-205ENST00000518196 YTHDF1Q9BYJ9 559 aaKnown RBP11.21□□□□□ -0.61
PABPC1-205ENST00000518196 TBCCD1Q9NVR7 557 aa11.21□□□□□ -0.61
PABPC1-205ENST00000518196 ERVK13-1Q9NX77 482 aa11.21□□□□□ -0.61
PABPC1-205ENST00000518196 UBAP1Q9NZ09 502 aa11.21□□□□□ -0.61
PABPC1-205ENST00000518196 LRP12Q9Y561 859 aa11.21□□□□□ -0.61
PABPC1-205ENST00000518196 USP9YO00507 2555 aaPredicted RBP11.21□□□□□ -0.62
PABPC1-205ENST00000518196 SMPD2O60906 423 aa11.2□□□□□ -0.62
PABPC1-205ENST00000518196 SULT1C4O75897 302 aa11.2□□□□□ -0.62
PABPC1-205ENST00000518196 LCATP04180 440 aa11.2□□□□□ -0.62
PABPC1-205ENST00000518196 LCKP06239 509 aa11.2□□□□□ -0.62
PABPC1-205ENST00000518196 TUBG1P23258 451 aa11.2□□□□□ -0.62
PABPC1-205ENST00000518196 DCTDP32321 178 aa11.2□□□□□ -0.62
PABPC1-205ENST00000518196 GLRXP35754 106 aa11.2□□□□□ -0.62
PABPC1-205ENST00000518196 WNT5AP41221 380 aa11.2□□□□□ -0.62
PABPC1-205ENST00000518196 ZNF829Q3KNS6 432 aaPredicted RBP11.2□□□□□ -0.62
PABPC1-205ENST00000518196 ZNF672Q499Z4 452 aaPredicted RBP11.2□□□□□ -0.62
PABPC1-205ENST00000518196 CDONQ4KMG0 1287 aa11.2□□□□□ -0.62
PABPC1-205ENST00000518196 HIST2H2BCQ6DN03 193 aa11.2□□□□□ -0.62
PABPC1-205ENST00000518196 VHLLQ6RSH7 139 aa11.2□□□□□ -0.62
PABPC1-205ENST00000518196 EGFL6Q8IUX8 553 aa11.2□□□□□ -0.62
PABPC1-205ENST00000518196 RFLNBQ8N5W9 214 aa11.2□□□□□ -0.62
PABPC1-205ENST00000518196 OR1J1Q8NGS3 322 aa11.2□□□□□ -0.62
PABPC1-205ENST00000518196 ABHD4Q8TB40 342 aa11.2□□□□□ -0.62
PABPC1-205ENST00000518196 AKAP1Q92667 903 aaKnown RBP eCLIP11.2□□□□□ -0.622e-8■■■□□ 15
PABPC1-205ENST00000518196 APOBEC3DQ96AK3 386 aaPredicted RBP11.2□□□□□ -0.62
PABPC1-205ENST00000518196 RHNO1Q9BSD3 238 aa11.2□□□□□ -0.62
PABPC1-205ENST00000518196 ALG8Q9BVK2 526 aa11.2□□□□□ -0.62
PABPC1-205ENST00000518196 C1QTNF5Q9BXJ0 243 aa11.2□□□□□ -0.62
PABPC1-205ENST00000518196 CLEC4MQ9H2X3 399 aaPredicted RBP11.2□□□□□ -0.62
PABPC1-205ENST00000518196 OR51B6Q9H340 312 aa11.2□□□□□ -0.62
PABPC1-205ENST00000518196 TUBG2Q9NRH3 451 aa11.2□□□□□ -0.62
PABPC1-205ENST00000518196 FKBP14Q9NWM8 211 aa11.2□□□□□ -0.62
PABPC1-205ENST00000518196 CISD1Q9NZ45 108 aaKnown RBP11.2□□□□□ -0.62
PABPC1-205ENST00000518196 MRM2Q9UI43 246 aaKnown RBP11.2□□□□□ -0.62
PABPC1-205ENST00000518196 GNG8Q9UK08 70 aa11.2□□□□□ -0.62
PABPC1-205ENST00000518196 ACOD1A6NK06 481 aa11.19□□□□□ -0.62
PABPC1-205ENST00000518196 PRR32B1ATL7 298 aa11.19□□□□□ -0.62
PABPC1-205ENST00000518196 E7EQL1 145 aa11.19□□□□□ -0.62
PABPC1-205ENST00000518196 J3QLW9 94 aa11.19□□□□□ -0.62
PABPC1-205ENST00000518196 MAGEB4O15481 346 aaPredicted RBP11.19□□□□□ -0.62
PABPC1-205ENST00000518196 CDK1P06493 297 aa11.19□□□□□ -0.62
PABPC1-205ENST00000518196 ANXA2P07355 339 aaKnown RBP11.19□□□□□ -0.62
PABPC1-205ENST00000518196 ZNF19P17023 458 aa11.19□□□□□ -0.62
PABPC1-205ENST00000518196 CRHBPP24387 322 aa11.19□□□□□ -0.62
PABPC1-205ENST00000518196 EEF1B2P24534 225 aaKnown RBP11.19□□□□□ -0.62
PABPC1-205ENST00000518196 PPP1CBP62140 327 aa11.19□□□□□ -0.62
PABPC1-205ENST00000518196 NKX6-1P78426 367 aaPredicted RBP11.19□□□□□ -0.62
PABPC1-205ENST00000518196 TP53I3Q53FA7 332 aa11.19□□□□□ -0.62
PABPC1-205ENST00000518196 RGS7BPQ6MZT1 257 aaPredicted RBP11.19□□□□□ -0.62
PABPC1-205ENST00000518196 TMPRSS11AQ6ZMR5 421 aa11.19□□□□□ -0.62
PABPC1-205ENST00000518196 C8orf86Q6ZUL3 223 aa11.19□□□□□ -0.62
PABPC1-205ENST00000518196 SYS1Q8N2H4 156 aa11.19□□□□□ -0.62
PABPC1-205ENST00000518196 KLHL36Q8N4N3 616 aa11.19□□□□□ -0.62
PABPC1-205ENST00000518196 NEUROG1Q92886 237 aa11.19□□□□□ -0.62
PABPC1-205ENST00000518196 DOK1Q99704 481 aa11.19□□□□□ -0.62
PABPC1-205ENST00000518196 DHRS9Q9BPW9 319 aa11.19□□□□□ -0.62
PABPC1-205ENST00000518196 ZNF442Q9H7R0 627 aa11.19□□□□□ -0.62
PABPC1-205ENST00000518196 CAB39Q9Y376 341 aaPredicted RBP11.19□□□□□ -0.62
PABPC1-205ENST00000518196 CMAHPQ9Y471 501 aa11.19□□□□□ -0.62
PABPC1-205ENST00000518196 PCDHGB5Q9Y5G0 923 aa11.19□□□□□ -0.62
PABPC1-205ENST00000518196 N6AMT1Q9Y5N5 214 aa11.19□□□□□ -0.62
PABPC1-205ENST00000518196 ABCA4P78363 2273 aa11.19□□□□□ -0.62
PABPC1-205ENST00000518196 TMEM269A0A1B0GVZ9 245 aa11.18□□□□□ -0.62
PABPC1-205ENST00000518196 HS3ST1O14792 307 aa11.18□□□□□ -0.62
PABPC1-205ENST00000518196 TBX1O43435 398 aa11.18□□□□□ -0.62
PABPC1-205ENST00000518196 RGS10O43665 173 aa11.18□□□□□ -0.62
PABPC1-205ENST00000518196 RGS9O75916 674 aaPredicted RBP11.18□□□□□ -0.62
PABPC1-205ENST00000518196 RPP14O95059 124 aaKnown RBP11.18□□□□□ -0.62
PABPC1-205ENST00000518196 NGFP01138 241 aa11.18□□□□□ -0.62
PABPC1-205ENST00000518196 SLC2A1P11166 492 aa11.18□□□□□ -0.62
PABPC1-205ENST00000518196 APOBEC3AP31941 199 aaPredicted RBP11.18□□□□□ -0.62
PABPC1-205ENST00000518196 THBS4P35443 961 aa11.18□□□□□ -0.62
PABPC1-205ENST00000518196 ETV1P50549 477 aa11.18□□□□□ -0.62
PABPC1-205ENST00000518196 FABP6P51161 128 aa11.18□□□□□ -0.62
PABPC1-205ENST00000518196 OR12D2P58182 307 aa11.18□□□□□ -0.62
PABPC1-205ENST00000518196 ZNF121P58317 390 aaPredicted RBP11.18□□□□□ -0.62
PABPC1-205ENST00000518196 SELENOVP59797 346 aa11.18□□□□□ -0.62
PABPC1-205ENST00000518196 SLC35A2P78381 396 aa11.18□□□□□ -0.62
PABPC1-205ENST00000518196 MALLQ13021 153 aa11.18□□□□□ -0.62
PABPC1-205ENST00000518196 ZNF718Q3SXZ3 478 aa11.18□□□□□ -0.62
PABPC1-205ENST00000518196 ZNF684Q5T5D7 378 aa11.18□□□□□ -0.62
PABPC1-205ENST00000518196 LIPNQ5VXI9 398 aa11.18□□□□□ -0.62
PABPC1-205ENST00000518196 ZNF544Q6NX49 715 aa11.18□□□□□ -0.62
PABPC1-205ENST00000518196 COLCA1Q6ZS62 124 aa11.18□□□□□ -0.62
PABPC1-205ENST00000518196 FAM57BQ71RH2 274 aa11.18□□□□□ -0.62
PABPC1-205ENST00000518196 NAA40Q86UY6 237 aa11.18□□□□□ -0.62
PABPC1-205ENST00000518196 ZNF101Q8IZC7 436 aa11.18□□□□□ -0.62
PABPC1-205ENST00000518196 OR52H1Q8NGJ2 320 aa11.18□□□□□ -0.62
PABPC1-205ENST00000518196 LILRB1Q8NHL6 650 aaPredicted RBP11.18□□□□□ -0.62
PABPC1-205ENST00000518196 HAVCR2Q8TDQ0 301 aa11.18□□□□□ -0.62
PABPC1-205ENST00000518196 FBXW5Q969U6 566 aa11.18□□□□□ -0.62
PABPC1-205ENST00000518196 PGAM5Q96HS1 289 aa11.18□□□□□ -0.62
PABPC1-205ENST00000518196 C4orf36Q96KX1 117 aa11.18□□□□□ -0.62
PABPC1-205ENST00000518196 OR10A2Q9H208 303 aa11.18□□□□□ -0.62
PABPC1-205ENST00000518196 DUSP21Q9H596 190 aa11.18□□□□□ -0.62
PABPC1-205ENST00000518196 UBTD1Q9HAC8 227 aa11.18□□□□□ -0.62
PABPC1-205ENST00000518196 CA10Q9NS85 328 aa11.18□□□□□ -0.62
PABPC1-205ENST00000518196 FAIMQ9NVQ4 179 aa11.18□□□□□ -0.62
PABPC1-205ENST00000518196 ERGIC3Q9Y282 383 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms