RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 MEX3DQ86XN8 651 aaKnown RBP3.2□□□□□ -1.9
HMGN1P11-201ENST00000508668 PTOV1Q86YD1 416 aa3.2□□□□□ -1.9
HMGN1P11-201ENST00000508668 SKA3Q8IX90 412 aa3.2□□□□□ -1.9
HMGN1P11-201ENST00000508668 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.2□□□□□ -1.9
HMGN1P11-201ENST00000508668 NOXO1Q8NFA2 376 aa3.2□□□□□ -1.9
HMGN1P11-201ENST00000508668 OR2Z1Q8NG97 314 aa3.2□□□□□ -1.9
HMGN1P11-201ENST00000508668 OR9I1Q8NGQ6 314 aa3.2□□□□□ -1.9
HMGN1P11-201ENST00000508668 OR2AJ1Q8NGZ0 328 aa3.2□□□□□ -1.9
HMGN1P11-201ENST00000508668 CLDND2Q8NHS1 167 aa3.2□□□□□ -1.9
HMGN1P11-201ENST00000508668 ADAMTS16Q8TE57 1224 aa3.2□□□□□ -1.9
HMGN1P11-201ENST00000508668 NTN5Q8WTR8 489 aaPredicted RBP3.2□□□□□ -1.9
HMGN1P11-201ENST00000508668 FAM216AQ8WUB2 273 aa3.2□□□□□ -1.9
HMGN1P11-201ENST00000508668 TMEM239Q8WW34 195 aa3.2□□□□□ -1.9
HMGN1P11-201ENST00000508668 GTF2H4Q92759 462 aa3.2□□□□□ -1.9
HMGN1P11-201ENST00000508668 DPF1Q92782 380 aa3.2□□□□□ -1.9
HMGN1P11-201ENST00000508668 MCUR1Q96AQ8 359 aa3.2□□□□□ -1.9
HMGN1P11-201ENST00000508668 SLC41A3Q96GZ6 507 aa3.2□□□□□ -1.9
HMGN1P11-201ENST00000508668 TXNDC15Q96J42 360 aa3.2□□□□□ -1.9
HMGN1P11-201ENST00000508668 ZNF583Q96ND8 569 aa3.2□□□□□ -1.9
HMGN1P11-201ENST00000508668 ZNF582Q96NG8 517 aaPredicted RBP3.2□□□□□ -1.9
HMGN1P11-201ENST00000508668 OR52B2Q96RD2 323 aa3.2□□□□□ -1.9
HMGN1P11-201ENST00000508668 WACQ9BTA9 647 aa3.2□□□□□ -1.9
HMGN1P11-201ENST00000508668 PAIP1Q9H074 479 aaKnown RBP3.2□□□□□ -1.9
HMGN1P11-201ENST00000508668 ARL8BQ9NVJ2 186 aa3.2□□□□□ -1.9
HMGN1P11-201ENST00000508668 TMEM38BQ9NVV0 291 aa3.2□□□□□ -1.9
HMGN1P11-201ENST00000508668 PPP1R3CQ9UQK1 317 aa3.2□□□□□ -1.9
HMGN1P11-201ENST00000508668 TMEM5Q9Y2B1 443 aa3.2□□□□□ -1.9
HMGN1P11-201ENST00000508668 CAB39Q9Y376 341 aaPredicted RBP3.2□□□□□ -1.9
HMGN1P11-201ENST00000508668 AUP1Q9Y679 476 aa3.2□□□□□ -1.9
HMGN1P11-201ENST00000508668 FN1P02751 2386 aaKnown RBP3.2□□□□□ -1.9
HMGN1P11-201ENST00000508668 RTTNQ86VV8 2226 aa3.2□□□□□ -1.9
HMGN1P11-201ENST00000508668 LOC105371242A0A075B767 164 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 BBIP1A8MTZ0 92 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 HMGB1P1B2RPK0 211 aaPredicted RBP3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 MS4A18H0YCH9 400 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 H3BSA7 217 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 PLPP2O43688 288 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 DOK2O60496 412 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 SNNO75324 88 aaPredicted RBP3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 OR7A10O76100 309 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 MFN2O95140 757 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 OR5F1O95221 314 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 SNAP29O95721 258 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 RENP00797 406 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 NPPAP01160 153 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 BGLAPP02818 100 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 PATE4P0C8F1 98 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 THRBP10828 461 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 IFI30P13284 250 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 ZNF35P13682 527 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 HLA-DOBP13765 273 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 RPS2P15880 293 aaKnown RBP3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 ZNF823P16415 610 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 ZNF14P17017 642 aaPredicted RBP3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 GPX2P18283 190 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 MSR1P21757 451 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 CPT2P23786 658 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 COL8A2P25067 703 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 HTR2AP28223 471 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 DUSP1P28562 367 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 MAGEB1P43366 347 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 HTR5AP47898 357 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 RGS6P49758 472 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 RPS6KA3P51812 740 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 SLC7A2P52569 658 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 SMIM11AP58511 58 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 MTPNP58546 118 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 HILS1P60008 231 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 PPP1CBP62140 327 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 ERVK-25P63136 954 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 MRPS34P82930 218 aaKnown RBP3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 ECH1Q13011 328 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 TRAM2Q15035 370 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 ZNF74Q16587 644 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 MS4A18Q3C1V0 323 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 SLC36A3Q495N2 470 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 MTX3Q5HYI7 312 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 CEP78Q5JTW2 689 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 ATPAF1Q5TC12 328 aaPredicted RBP3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 AGBL2Q5U5Z8 902 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 GPR157Q5UAW9 335 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 LIN54Q6MZP7 749 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 ACSM6Q6P461 480 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 C16orf89Q6UX73 402 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 LRRN1Q6UXK5 716 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 USP43Q70EL4 1123 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 CARM1Q86X55 608 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 WDFY1Q8IWB7 410 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 TMEM123Q8N131 208 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 SCCPDHQ8NBX0 429 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 OR2T12Q8NG77 320 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 OR8B3Q8NGG8 313 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 OR52L2PQ8NGH6 319 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 OR52E2Q8NGJ4 325 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 OR4C15Q8NGM1 316 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 OR6T1Q8NGN1 323 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 OR51A7Q8NH64 312 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 OR10A6Q8NH74 314 aa3.19□□□□□ -1.9
HMGN1P11-201ENST00000508668 SPRYD4Q8WW59 207 aaPredicted RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms