RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 FAM53CQ9NYF3 392 aa8.94□□□□□ -0.98
NELFE-213ENST00000494956 CGGBP1Q9UFW8 167 aaPredicted RBP8.94□□□□□ -0.98
NELFE-213ENST00000494956 ATPIF1Q9UII2 106 aa8.94□□□□□ -0.98
NELFE-213ENST00000494956 PRPF19Q9UMS4 504 aaKnown RBP8.94□□□□□ -0.98
NELFE-213ENST00000494956 PPP1R3CQ9UQK1 317 aa8.94□□□□□ -0.98
NELFE-213ENST00000494956 N6AMT1Q9Y5N5 214 aa8.94□□□□□ -0.98
NELFE-213ENST00000494956 COMMD3-BMI1R4GMX3 469 aa8.94□□□□□ -0.98
NELFE-213ENST00000494956 TRAV20A0A0B4J274 112 aa8.93□□□□□ -0.98
NELFE-213ENST00000494956 IQCF6A8MYZ5 107 aa8.93□□□□□ -0.98
NELFE-213ENST00000494956 M0R135 149 aa8.93□□□□□ -0.98
NELFE-213ENST00000494956 VENTXO95231 258 aa8.93□□□□□ -0.98
NELFE-213ENST00000494956 PNPP00491 289 aa8.93□□□□□ -0.98
NELFE-213ENST00000494956 SPARCP09486 303 aa8.93□□□□□ -0.98
NELFE-213ENST00000494956 RAP2AP10114 183 aa8.93□□□□□ -0.98
NELFE-213ENST00000494956 ZNF823P16415 610 aa8.93□□□□□ -0.98
NELFE-213ENST00000494956 SPI1P17947 270 aa8.93□□□□□ -0.98
NELFE-213ENST00000494956 PRKACGP22612 351 aa8.93□□□□□ -0.98
NELFE-213ENST00000494956 TUBG1P23258 451 aa8.93□□□□□ -0.98
NELFE-213ENST00000494956 TNFSF4P23510 183 aa8.93□□□□□ -0.98
NELFE-213ENST00000494956 SLC6A9P48067 706 aa8.93□□□□□ -0.98
NELFE-213ENST00000494956 RGS6P49758 472 aa8.93□□□□□ -0.98
NELFE-213ENST00000494956 MMP16P51512 607 aa8.93□□□□□ -0.98
NELFE-213ENST00000494956 PRKXP51817 358 aa8.93□□□□□ -0.98
NELFE-213ENST00000494956 GUCA2AQ02747 115 aa8.93□□□□□ -0.98
NELFE-213ENST00000494956 PRAMEF6Q5VXH4 476 aa8.93□□□□□ -0.98
NELFE-213ENST00000494956 RPL13AP3Q6NVV1 102 aa8.93□□□□□ -0.98
NELFE-213ENST00000494956 BRICD5Q6PL45 260 aa8.93□□□□□ -0.98
NELFE-213ENST00000494956 TRPM8Q7Z2W7 1104 aa8.93□□□□□ -0.98
NELFE-213ENST00000494956 DCXRQ7Z4W1 244 aa8.93□□□□□ -0.98
NELFE-213ENST00000494956 MOGAT3Q86VF5 341 aa8.93□□□□□ -0.98
NELFE-213ENST00000494956 OR5L1Q8NGL2 311 aa8.93□□□□□ -0.98
NELFE-213ENST00000494956 OR2T4Q8NH00 348 aa8.93□□□□□ -0.98
NELFE-213ENST00000494956 BCAS4Q8TDM0 211 aa8.93□□□□□ -0.98
NELFE-213ENST00000494956 GIPC3Q8TF64 312 aa8.93□□□□□ -0.98
NELFE-213ENST00000494956 OTULINQ96BN8 352 aa8.93□□□□□ -0.98
NELFE-213ENST00000494956 SLC7A6OSQ96CW6 309 aaPredicted RBP8.93□□□□□ -0.98
NELFE-213ENST00000494956 KCTD12Q96CX2 325 aaKnown RBP8.93□□□□□ -0.98
NELFE-213ENST00000494956 ZNF799Q96GE5 643 aa8.93□□□□□ -0.98
NELFE-213ENST00000494956 COG8Q96MW5 612 aa8.93□□□□□ -0.98
NELFE-213ENST00000494956 ZNF582Q96NG8 517 aaPredicted RBP8.93□□□□□ -0.98
NELFE-213ENST00000494956 SLC30A2Q9BRI3 323 aa8.93□□□□□ -0.98
NELFE-213ENST00000494956 DGCR6LQ9BY27 220 aa8.93□□□□□ -0.98
NELFE-213ENST00000494956 NMNAT2Q9BZQ4 307 aa8.93□□□□□ -0.98
NELFE-213ENST00000494956 C1orf21Q9H246 121 aa8.93□□□□□ -0.98
NELFE-213ENST00000494956 GCM1Q9NP62 436 aa8.93□□□□□ -0.98
NELFE-213ENST00000494956 TUBG2Q9NRH3 451 aa8.93□□□□□ -0.98
NELFE-213ENST00000494956 CENPMQ9NSP4 180 aa8.93□□□□□ -0.98
NELFE-213ENST00000494956 IL19Q9UHD0 177 aa8.93□□□□□ -0.98
NELFE-213ENST00000494956 TMEM178BH3BS89 294 aa8.92□□□□□ -0.98
NELFE-213ENST00000494956 ZNF593O00488 134 aaPredicted RBP8.92□□□□□ -0.98
NELFE-213ENST00000494956 TCF21O43680 179 aa8.92□□□□□ -0.98
NELFE-213ENST00000494956 ANPEPP15144 967 aa8.92□□□□□ -0.98
NELFE-213ENST00000494956 TNFRSF1AP19438 455 aa8.92□□□□□ -0.98
NELFE-213ENST00000494956 POU1F1P28069 291 aa8.92□□□□□ -0.98
NELFE-213ENST00000494956 THBS2P35442 1172 aa8.92□□□□□ -0.98
NELFE-213ENST00000494956 BTG1P62324 171 aa8.92□□□□□ -0.98
NELFE-213ENST00000494956 ZNF92Q03936 586 aa8.92□□□□□ -0.98
NELFE-213ENST00000494956 SLC3A1Q07837 685 aa8.92□□□□□ -0.98
NELFE-213ENST00000494956 MAB21L1Q13394 359 aa8.92□□□□□ -0.98
NELFE-213ENST00000494956 GLYATL3Q5SZD4 288 aa8.92□□□□□ -0.98
NELFE-213ENST00000494956 LINC01590Q5TEZ4 76 aa8.92□□□□□ -0.98
NELFE-213ENST00000494956 DCAF12L2Q5VW00 463 aa8.92□□□□□ -0.98
NELFE-213ENST00000494956 SHQ1Q6PI26 577 aaKnown RBP8.92□□□□□ -0.98
NELFE-213ENST00000494956 PEG10Q86TG7 708 aaKnown RBP8.92□□□□□ -0.98
NELFE-213ENST00000494956 LINC00471Q8N535 108 aa8.92□□□□□ -0.98
NELFE-213ENST00000494956 OR2T33Q8NG76 320 aa8.92□□□□□ -0.98
NELFE-213ENST00000494956 OR6K6Q8NGW6 343 aa8.92□□□□□ -0.98
NELFE-213ENST00000494956 OR13G1Q8NGZ3 307 aa8.92□□□□□ -0.98
NELFE-213ENST00000494956 C22orf15Q8WYQ4 148 aa8.92□□□□□ -0.98
NELFE-213ENST00000494956 SLAMF6Q96DU3 332 aa8.92□□□□□ -0.98
NELFE-213ENST00000494956 UFSP2Q9NUQ7 469 aa8.92□□□□□ -0.98
NELFE-213ENST00000494956 PDP1Q9P0J1 537 aaPredicted RBP8.92□□□□□ -0.98
NELFE-213ENST00000494956 OPN4Q9UHM6 478 aa8.92□□□□□ -0.98
NELFE-213ENST00000494956 PCDHB10Q9UN67 800 aa8.92□□□□□ -0.98
NELFE-213ENST00000494956 DHRS12A0PJE2 317 aa8.91□□□□□ -0.98
NELFE-213ENST00000494956 H3BN98 237 aa8.91□□□□□ -0.98
NELFE-213ENST00000494956 TRAPPC2LH3BP13 241 aa8.91□□□□□ -0.98
NELFE-213ENST00000494956 J3QW42 95 aa8.91□□□□□ -0.98
NELFE-213ENST00000494956 GNGT2O14610 69 aa8.91□□□□□ -0.98
NELFE-213ENST00000494956 GYG2O15488 501 aa8.91□□□□□ -0.98
NELFE-213ENST00000494956 EPHA1P21709 976 aa8.91□□□□□ -0.98
NELFE-213ENST00000494956 PCMT1P22061 227 aa8.91□□□□□ -0.98
NELFE-213ENST00000494956 CA6P23280 308 aa8.91□□□□□ -0.98
NELFE-213ENST00000494956 FMO3P31513 532 aa8.91□□□□□ -0.98
NELFE-213ENST00000494956 ENTPD1P49961 510 aa8.91□□□□□ -0.98
NELFE-213ENST00000494956 TPTEP56180 551 aa8.91□□□□□ -0.98
NELFE-213ENST00000494956 ECH1Q13011 328 aa8.91□□□□□ -0.98
NELFE-213ENST00000494956 MPPED2Q15777 294 aa8.91□□□□□ -0.98
NELFE-213ENST00000494956 TMEM236Q5W0B7 351 aa8.91□□□□□ -0.98
NELFE-213ENST00000494956 PGAP1Q75T13 922 aa8.91□□□□□ -0.98
NELFE-213ENST00000494956 MRPL21Q7Z2W9 205 aaKnown RBP8.91□□□□□ -0.98
NELFE-213ENST00000494956 SPATA24Q86W54 205 aa8.91□□□□□ -0.98
NELFE-213ENST00000494956 LRRC28Q86X40 367 aaPredicted RBP8.91□□□□□ -0.98
NELFE-213ENST00000494956 RFLNBQ8N5W9 214 aa8.91□□□□□ -0.98
NELFE-213ENST00000494956 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.91□□□□□ -0.98
NELFE-213ENST00000494956 OR6N2Q8NGY6 317 aa8.91□□□□□ -0.98
NELFE-213ENST00000494956 TEX47Q8TBZ9 253 aa8.91□□□□□ -0.98
NELFE-213ENST00000494956 ST7LQ8TDW4 575 aa8.91□□□□□ -0.98
NELFE-213ENST00000494956 AMELYQ99218 206 aa8.91□□□□□ -0.98
NELFE-213ENST00000494956 COPS4Q9BT78 406 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms