RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 LCN6P62502 163 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 RAP1AP62834 184 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 DBPQ10586 325 aaPredicted RBP4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 MAB21L1Q13394 359 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 AQP6Q13520 282 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 PIN1Q13526 163 aaPredicted RBP4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 FHL1Q13642 323 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 HERPUD1Q15011 391 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 MPPED2Q15777 294 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 KCNJ8Q15842 424 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 KLHL22Q53GT1 634 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 CCDC92Q53HC0 331 aaPredicted RBP4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 OTPQ5XKR4 325 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 Q6ZS46 218 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 DHDDSQ86SQ9 333 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 PDZD9Q8IXQ8 264 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 GALNT4Q8N4A0 578 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 CELF2-AS1Q8N7Q2 184 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 LRRC75AQ8NAA5 344 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 SCCPDHQ8NBX0 429 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 OR5L1Q8NGL2 311 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 OR1F12Q8NHA8 337 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 CFHR4Q92496 578 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 ERGIC1Q969X5 290 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 ZBTB9Q96C00 473 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 RASD2Q96D21 266 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 ANAPC16Q96DE5 110 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 CGREF1Q99674 301 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 ECSITQ9BQ95 431 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 POLR2J2Q9GZM3 115 aaKnown RBP4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 POLR2J3Q9H1A7 115 aaKnown RBP4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 MMADHCQ9H3L0 296 aaPredicted RBP4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 CENPHQ9H3R5 247 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 KAT8Q9H7Z6 458 aaKnown RBP4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 WDR76Q9H967 626 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 TMEM100Q9NV29 134 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 NECAP2Q9NVZ3 263 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 AURKAIP1Q9NWT8 199 aaPredicted RBP4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 ZNRD1Q9P1U0 126 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 ERVK-18Q9QC07 812 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 FBLN5Q9UBX5 448 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 RIMS3Q9UJD0 308 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 MED31Q9Y3C7 131 aa4.22□□□□□ -1.73
SNRNP40-204ENST00000474025 CSMD3Q7Z407 3707 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 TEX13CA0A0J9YWL9 993 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 ELOVL7A1L3X0 281 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 PRSS37A4D1T9 235 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 BTBD17A6NE02 478 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 F8W735 103 aaPredicted RBP4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 RNASEK-C17orf49H0YIS7 233 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 LGALS8O00214 317 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 RER1O15258 196 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 ADAM20O43506 726 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 OR10H3O60404 316 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 PTBP3O95758 552 aaKnown RBP4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 GABRA5P31644 462 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 TGFBR2P37173 567 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 CD200P41217 278 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 EFNB2P52799 333 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 SLC18A1P54219 525 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 LSM6P62312 80 aaKnown RBP4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 RSPO1Q2MKA7 263 aaPredicted RBP4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 VMACQ2NL98 169 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 CDONQ4KMG0 1287 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 AGKQ53H12 422 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 MESTQ5EB52 335 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 INTS11Q5TA45 600 aaKnown RBP4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 PRAMEF6Q5VXH4 476 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 SFRP4Q6FHJ7 346 aaPredicted RBP4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 SLC35E4Q6ICL7 350 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 WDR93Q6P2C0 686 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 COLCA1Q6ZS62 124 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 Q6ZTK2 550 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 CCDC80Q76M96 950 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 BTN2A1Q7KYR7 527 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 FAM122BQ7Z309 247 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 VMO1Q7Z5L0 202 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 MICU2Q8IYU8 434 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 DPP10Q8N608 796 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 C11orf44Q8N8P7 122 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 FAM156AQ8NDB6 213 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 OR11L1Q8NGX0 322 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 OR51A7Q8NH64 312 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 SLC26A7Q8TE54 656 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 NPRL2Q8WTW4 380 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 RASSF5Q8WWW0 418 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 APOBEC3DQ96AK3 386 aaPredicted RBP4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 BPIFA2Q96DR5 249 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 WWC2-AS2Q96NR7 200 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 EBF4Q9BQW3 602 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 HCAR1Q9BXC0 346 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 TOR3AQ9H497 397 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 UFSP2Q9NUQ7 469 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 RNF7Q9UBF6 113 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 RPUSD1Q9UJJ7 312 aaKnown RBP4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 FOXJ3Q9UPW0 622 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 SIGLEC9Q9Y336 463 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 SH3GLB1Q9Y371 365 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 FAM96BQ9Y3D0 163 aa4.21□□□□□ -1.74
SNRNP40-204ENST00000474025 ADAM18Q9Y3Q7 739 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms