RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 GHITMQ9H3K2 345 aa9.46□□□□□ -0.89
PKP4-206ENST00000452162 C1orf198Q9H425 327 aa9.46□□□□□ -0.89
PKP4-206ENST00000452162 EMC7Q9NPA0 242 aa9.46□□□□□ -0.89
PKP4-206ENST00000452162 ZNF275Q9NSD4 429 aaPredicted RBP9.46□□□□□ -0.89
PKP4-206ENST00000452162 MCUBQ9NWR8 336 aa9.46□□□□□ -0.89
PKP4-206ENST00000452162 RCE1Q9Y256 329 aa9.46□□□□□ -0.89
PKP4-206ENST00000452162 A0A0A6YYJ9 748 aa9.46□□□□□ -0.9
PKP4-206ENST00000452162 ACOT7O00154 380 aa9.46□□□□□ -0.9
PKP4-206ENST00000452162 XRCC3O43542 346 aa9.46□□□□□ -0.9
PKP4-206ENST00000452162 DOK2O60496 412 aa9.46□□□□□ -0.9
PKP4-206ENST00000452162 LMX1BO60663 402 aa9.46□□□□□ -0.9
PKP4-206ENST00000452162 ECDO95905 644 aaPredicted RBP9.46□□□□□ -0.9
PKP4-206ENST00000452162 DHFRP00374 187 aa9.46□□□□□ -0.9
PKP4-206ENST00000452162 PTHLHP12272 177 aa9.46□□□□□ -0.9
PKP4-206ENST00000452162 ZNF17P17021 662 aa9.46□□□□□ -0.9
PKP4-206ENST00000452162 CASRP41180 1078 aa9.46□□□□□ -0.9
PKP4-206ENST00000452162 POU3F4P49335 361 aa9.46□□□□□ -0.9
PKP4-206ENST00000452162 KCNMB1Q16558 191 aa9.46□□□□□ -0.9
PKP4-206ENST00000452162 ZNF766Q5HY98 468 aa9.46□□□□□ -0.9
PKP4-206ENST00000452162 TMEM244Q5VVB8 128 aa9.46□□□□□ -0.9
PKP4-206ENST00000452162 RAET1LQ5VY80 246 aa9.46□□□□□ -0.9
PKP4-206ENST00000452162 CARD17Q5XLA6 110 aa9.46□□□□□ -0.9
PKP4-206ENST00000452162 ANKRD16Q6P6B7 361 aa9.46□□□□□ -0.9
PKP4-206ENST00000452162 UTS2BQ765I0 119 aa9.46□□□□□ -0.9
PKP4-206ENST00000452162 BTN2A1Q7KYR7 527 aa9.46□□□□□ -0.9
PKP4-206ENST00000452162 NOXA1Q86UR1 476 aa9.46□□□□□ -0.9
PKP4-206ENST00000452162 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.46□□□□□ -0.9
PKP4-206ENST00000452162 CAPSLQ8WWF8 208 aa9.46□□□□□ -0.9
PKP4-206ENST00000452162 FAM3DQ96BQ1 224 aa9.46□□□□□ -0.9
PKP4-206ENST00000452162 TP63Q9H3D4 680 aaPredicted RBP9.46□□□□□ -0.9
PKP4-206ENST00000452162 HRASLSQ9HDD0 168 aa9.46□□□□□ -0.9
PKP4-206ENST00000452162 SLC17A5Q9NRA2 495 aa9.46□□□□□ -0.9
PKP4-206ENST00000452162 MRPL15Q9P015 296 aaKnown RBP9.46□□□□□ -0.9
PKP4-206ENST00000452162 CKLFQ9UBR5 152 aa9.46□□□□□ -0.9
PKP4-206ENST00000452162 GDF2Q9UK05 429 aaPredicted RBP9.46□□□□□ -0.9
PKP4-206ENST00000452162 DKKL1Q9UK85 242 aa9.46□□□□□ -0.9
PKP4-206ENST00000452162 FASNP49327 2511 aaKnown RBP9.46□□□□□ -0.9
PKP4-206ENST00000452162 LOC100289279A0A1B0GTE1 492 aa9.45□□□□□ -0.9
PKP4-206ENST00000452162 ANKRD20A5PA0PJZ0 165 aa9.45□□□□□ -0.9
PKP4-206ENST00000452162 P2RY10O00398 339 aa9.45□□□□□ -0.9
PKP4-206ENST00000452162 CTAG2O75638 210 aa9.45□□□□□ -0.9
PKP4-206ENST00000452162 CDAP32320 146 aa9.45□□□□□ -0.9
PKP4-206ENST00000452162 EIF1AXP47813 144 aaKnown RBP9.45□□□□□ -0.9
PKP4-206ENST00000452162 RAG2P55895 527 aa9.45□□□□□ -0.9
PKP4-206ENST00000452162 C2orf76Q3KRA6 126 aa9.45□□□□□ -0.9
PKP4-206ENST00000452162 TMEM255AQ5JRV8 349 aa9.45□□□□□ -0.9
PKP4-206ENST00000452162 OLFML2AQ68BL7 652 aa9.45□□□□□ -0.9
PKP4-206ENST00000452162 GLT8D1Q68CQ7 371 aa9.45□□□□□ -0.9
PKP4-206ENST00000452162 LIX1LQ8IVB5 337 aa9.45□□□□□ -0.9
PKP4-206ENST00000452162 ELMOD2Q8IZ81 293 aa9.45□□□□□ -0.9
PKP4-206ENST00000452162 CISD2Q8N5K1 135 aaKnown RBP9.45□□□□□ -0.9
PKP4-206ENST00000452162 PLPP7Q8NBV4 271 aa9.45□□□□□ -0.9
PKP4-206ENST00000452162 SGCZQ96LD1 299 aa9.45□□□□□ -0.9
PKP4-206ENST00000452162 KCNK15Q9H427 330 aa9.45□□□□□ -0.9
PKP4-206ENST00000452162 KLK11Q9UBX7 282 aa9.45□□□□□ -0.9
PKP4-206ENST00000452162 DNAJC13O75165 2243 aa9.45□□□□□ -0.9
PKP4-206ENST00000452162 A0A0G2JMM0 328 aa9.45□□□□□ -0.9
PKP4-206ENST00000452162 TMEM272A0A1B0GTI8 110 aa9.45□□□□□ -0.9
PKP4-206ENST00000452162 A0A1W2PPB8 328 aa9.45□□□□□ -0.9
PKP4-206ENST00000452162 A0A1W2PRS3 328 aa9.45□□□□□ -0.9
PKP4-206ENST00000452162 CIB4A0PJX0 185 aa9.45□□□□□ -0.9
PKP4-206ENST00000452162 NAP1L6A6NFF2 107 aa9.45□□□□□ -0.9
PKP4-206ENST00000452162 GGT3PA6NGU5 568 aa9.45□□□□□ -0.9
PKP4-206ENST00000452162 KIR3DP1A8MWS1 328 aa9.45□□□□□ -0.9
PKP4-206ENST00000452162 GMDSO60547 372 aa9.45□□□□□ -0.9
PKP4-206ENST00000452162 CBR3O75828 277 aa9.45□□□□□ -0.9
PKP4-206ENST00000452162 TTRP02766 147 aa9.45□□□□□ -0.9
PKP4-206ENST00000452162 SP1P08047 785 aa9.45□□□□□ -0.9
PKP4-206ENST00000452162 QDPRP09417 244 aa9.45□□□□□ -0.9
PKP4-206ENST00000452162 ACSM4P0C7M7 580 aa9.45□□□□□ -0.9
PKP4-206ENST00000452162 DNASE1L1P49184 302 aa9.45□□□□□ -0.9
PKP4-206ENST00000452162 AP3S2P59780 193 aa9.45□□□□□ -0.9
PKP4-206ENST00000452162 ELFN2Q5R3F8 820 aa9.45□□□□□ -0.9
PKP4-206ENST00000452162 SLC25A25Q6KCM7 469 aa9.45□□□□□ -0.9
PKP4-206ENST00000452162 GALNTL5Q7Z4T8 443 aa9.45□□□□□ -0.9
PKP4-206ENST00000452162 LYPD6Q86Y78 171 aa9.45□□□□□ -0.9
PKP4-206ENST00000452162 OR51A2Q8NGJ7 313 aa9.45□□□□□ -0.9
PKP4-206ENST00000452162 JSRP1Q96MG2 331 aaPredicted RBP9.45□□□□□ -0.9
PKP4-206ENST00000452162 SEC61A2Q9H9S3 476 aa9.45□□□□□ -0.9
PKP4-206ENST00000452162 RHBDD3Q9Y3P4 386 aa9.45□□□□□ -0.9
PKP4-206ENST00000452162 ZNF407Q9C0G0 2248 aa9.45□□□□□ -0.9
PKP4-206ENST00000452162 LOC390937A0A1W2PQ73 354 aa9.44□□□□□ -0.9
PKP4-206ENST00000452162 MEGF11A6BM72 1044 aa9.44□□□□□ -0.9
PKP4-206ENST00000452162 ZNF726A6NNF4 738 aa9.44□□□□□ -0.9
PKP4-206ENST00000452162 ZNF878C9JN71 531 aa9.44□□□□□ -0.9
PKP4-206ENST00000452162 CDK2AP1O14519 115 aa9.44□□□□□ -0.9
PKP4-206ENST00000452162 RGS13O14921 159 aa9.44□□□□□ -0.9
PKP4-206ENST00000452162 EIF1BO60739 113 aaKnown RBP9.44□□□□□ -0.9
PKP4-206ENST00000452162 YES1P07947 543 aa9.44□□□□□ -0.9
PKP4-206ENST00000452162 H2AFB2P0C5Z0 115 aa9.44□□□□□ -0.9
PKP4-206ENST00000452162 CD46P15529 392 aa9.44□□□□□ -0.9
PKP4-206ENST00000452162 CLDN17P56750 224 aa9.44□□□□□ -0.9
PKP4-206ENST00000452162 B3GALT5-AS1P59052 145 aa9.44□□□□□ -0.9
PKP4-206ENST00000452162 PSMA6P60900 246 aaKnown RBP9.44□□□□□ -0.9
PKP4-206ENST00000452162 PMP22Q01453 160 aa9.44□□□□□ -0.9
PKP4-206ENST00000452162 POU4F3Q15319 338 aa9.44□□□□□ -0.9
PKP4-206ENST00000452162 TOMM20Q15388 145 aa9.44□□□□□ -0.9
PKP4-206ENST00000452162 KLHL24Q6TFL4 600 aa9.44□□□□□ -0.9
PKP4-206ENST00000452162 CREB3L2Q70SY1 520 aa9.44□□□□□ -0.9
PKP4-206ENST00000452162 RHOUQ7L0Q8 258 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms