RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 DUX4L5P0CJ88 424 aa2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 DUX4L6P0CJ89 424 aa2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 DUX4L7P0CJ90 424 aa2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 PMCHP20382 165 aa2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 IL32P24001 234 aa2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 OR1E1P30953 314 aa2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 IFNA8P32881 189 aa2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 SLC1A1P43005 524 aa2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 CX3CR1P49238 355 aa2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 FBXW4P57775 412 aa2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 PSMC5P62195 406 aa2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 SPECC1LQ69YQ0 1117 aa2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 STUMQ69YW2 141 aa2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 APOBEC3HQ6NTF7 200 aaKnown RBP2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 ERICH5Q6P6B1 374 aa2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 ULK3Q6PHR2 472 aa2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 SLC25A34Q6PIV7 304 aa2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 CERS6Q6ZMG9 384 aa2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 NTM-AS1Q6ZSK4 140 aa2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 RBM45Q8IUH3 476 aaKnown RBP2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 ST13P4Q8IZP2 240 aaPredicted RBP2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 CYB561A3Q8NBI2 242 aa2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 HSD17B11Q8NBQ5 300 aa2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 OR10G4Q8NGN3 311 aa2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 ANGPTL6Q8NI99 470 aa2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 NUBPLQ8TB37 319 aa2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 DDI1Q8WTU0 396 aa2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 BAALCQ8WXS3 180 aa2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 TFGQ92734 400 aaPredicted RBP2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 APH1AQ96BI3 265 aa2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 SORT1Q99523 831 aa2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 MS4A12Q9NXJ0 267 aa2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 STX18Q9P2W9 335 aaKnown RBP2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 DUX4Q9UBX2 424 aa2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 PSG8Q9UQ74 426 aa2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 RCL1Q9Y2P8 373 aaKnown RBP2.25□□□□□ -2.05
HMGB1P49-201ENST00000418882 GPATCH8Q9UKJ3 1502 aaKnown RBP2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 A0A1W2PP18 115 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 TMEM120BA0PK00 339 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 SLC22A20A6NK97 555 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 PDZK1P1A8MUH7 402 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 HIDE1A8MVS5 230 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 K7EMT4 169 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 RFXANKO14593 260 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 SLC9A3R1O14745 358 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 SCN2BO60939 215 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 RBBP9O75884 186 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 VAPBO95292 243 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 YEATS4O95619 227 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 CLIC3O95833 236 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 IGLV3-19P01714 112 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 SERPINA5P05154 406 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 FGF1P05230 155 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 GLAP06280 429 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 KLK1P06870 262 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 DCNP07585 359 aaKnown RBP2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 FOLR1P15328 257 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 ZNF3P17036 446 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 CCNOP22674 350 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 NPY1RP25929 384 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 IL12BP29460 328 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 AQP2P41181 271 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 KCNJ3P48549 501 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 PLTPP55058 493 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 MYL6P60660 151 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 ESRRGP62508 458 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 COTL1Q14019 142 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 CCDC122Q5T0U0 273 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 HES5Q5TA89 166 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 ZNF470Q6ECI4 717 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 CLEC6AQ6EIG7 209 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 KRTAP5-7Q6L8G8 165 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 ZNF880Q6PDB4 577 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 ZNF493Q6ZR52 646 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 WDR86Q86TI4 376 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 RIMKLAQ8IXN7 391 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 JAGN1Q8N5M9 183 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 PRELID2Q8N945 189 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 TTC29Q8NA56 475 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 INO80EQ8NBZ0 244 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 OR5K2Q8NHB8 316 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 ZNF461Q8TAF7 563 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 SLC7A13Q8TCU3 470 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 PHF10Q8WUB8 498 aaKnown RBP2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 CCDC12Q8WUD4 166 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 ISOC2Q96AB3 205 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 RBMXL1Q96E39 390 aaKnown RBP2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 CATSPER2Q96P56 530 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 PARVGQ9HBI0 331 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 ZNF355PQ9NSJ1 428 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 CD300AQ9UGN4 299 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 CLEC2DQ9UHP7 191 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 SLC22A14Q9Y267 594 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 YARS2Q9Y2Z4 477 aaKnown RBP2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 PLA2R1Q13018 1463 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 TNS2Q63HR2 1409 aa2.24□□□□□ -2.05
HMGB1P49-201ENST00000418882 ADGRA3Q8IWK6 1321 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 TRAV6A0A075B6T7 132 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 A0A1W2PRD5 423 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 BET1O15155 118 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms