RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 C12orf73Q69YU5 71 aa16.35■□□□□ 0.21
SYNE4-202ENST00000340477 USP51Q70EK9 711 aa16.35■□□□□ 0.21
SYNE4-202ENST00000340477 PGAP1Q75T13 922 aa16.35■□□□□ 0.21
SYNE4-202ENST00000340477 RHOUQ7L0Q8 258 aa16.35■□□□□ 0.21
SYNE4-202ENST00000340477 GID4Q8IVV7 300 aa16.35■□□□□ 0.21
SYNE4-202ENST00000340477 OTOSQ8NHW6 89 aa16.35■□□□□ 0.21
SYNE4-202ENST00000340477 TMEM163Q8TC26 289 aa16.35■□□□□ 0.21
SYNE4-202ENST00000340477 THEM6Q8WUY1 208 aa16.35■□□□□ 0.21
SYNE4-202ENST00000340477 RNF133Q8WVZ7 376 aa16.35■□□□□ 0.21
SYNE4-202ENST00000340477 C9orf16Q9BUW7 83 aa16.35■□□□□ 0.21
SYNE4-202ENST00000340477 MSL2Q9HCI7 577 aa16.35■□□□□ 0.21
SYNE4-202ENST00000340477 LAMP5Q9UJQ1 280 aa16.35■□□□□ 0.21
SYNE4-202ENST00000340477 IGHV1-69-2A0A0G2JMI3 117 aa16.34■□□□□ 0.21
SYNE4-202ENST00000340477 SLC22A31A6NKX4 558 aa16.34■□□□□ 0.21
SYNE4-202ENST00000340477 LYNX1G3V0Z9 82 aa16.34■□□□□ 0.21
SYNE4-202ENST00000340477 EI24O14681 340 aa16.34■□□□□ 0.21
SYNE4-202ENST00000340477 ANXA2P07355 339 aaKnown RBP16.34■□□□□ 0.21
SYNE4-202ENST00000340477 LYNX1P0DP58 116 aa16.34■□□□□ 0.21
SYNE4-202ENST00000340477 SLC2A5P22732 501 aa16.34■□□□□ 0.21
SYNE4-202ENST00000340477 OTX1P32242 354 aaPredicted RBP16.34■□□□□ 0.21
SYNE4-202ENST00000340477 CX3CR1P49238 355 aa16.34■□□□□ 0.21
SYNE4-202ENST00000340477 ALDH3A2P51648 485 aa16.34■□□□□ 0.21
SYNE4-202ENST00000340477 TMEM33P57088 247 aa16.34■□□□□ 0.21
SYNE4-202ENST00000340477 TNFAIP6P98066 277 aaPredicted RBP16.34■□□□□ 0.21
SYNE4-202ENST00000340477 RSPO1Q2MKA7 263 aaPredicted RBP16.34■□□□□ 0.21
SYNE4-202ENST00000340477 TMEM249Q2WGJ8 235 aa16.34■□□□□ 0.21
SYNE4-202ENST00000340477 NXNL2Q5VZ03 156 aa16.34■□□□□ 0.21
SYNE4-202ENST00000340477 OR2T2Q6IF00 324 aa16.34■□□□□ 0.21
SYNE4-202ENST00000340477 Q71RC1 249 aaPredicted RBP16.34■□□□□ 0.21
SYNE4-202ENST00000340477 SLC16A9Q7RTY1 509 aa16.34■□□□□ 0.21
SYNE4-202ENST00000340477 OR5AS1Q8N127 324 aa16.34■□□□□ 0.21
SYNE4-202ENST00000340477 OR2Z1Q8NG97 314 aa16.34■□□□□ 0.21
SYNE4-202ENST00000340477 CNN2Q99439 309 aaKnown RBP16.34■□□□□ 0.21
SYNE4-202ENST00000340477 YIPF3Q9GZM5 350 aa16.34■□□□□ 0.21
SYNE4-202ENST00000340477 OPA3Q9H6K4 179 aa16.34■□□□□ 0.21
SYNE4-202ENST00000340477 IMPAD1Q9NX62 359 aa16.34■□□□□ 0.21
SYNE4-202ENST00000340477 USE1Q9NZ43 259 aa16.34■□□□□ 0.21
SYNE4-202ENST00000340477 N6AMT1Q9Y5N5 214 aa16.34■□□□□ 0.21
SYNE4-202ENST00000340477 TMEM14AQ9Y6G1 99 aa16.34■□□□□ 0.21
SYNE4-202ENST00000340477 PPIHO43447 177 aaKnown RBP16.33■□□□□ 0.2
SYNE4-202ENST00000340477 CDC14BO60729 498 aa16.33■□□□□ 0.2
SYNE4-202ENST00000340477 BAG2O95816 211 aa16.33■□□□□ 0.2
SYNE4-202ENST00000340477 ALPLP05186 524 aa16.33■□□□□ 0.2
SYNE4-202ENST00000340477 CD55P08174 381 aa16.33■□□□□ 0.2
SYNE4-202ENST00000340477 TNFRSF1AP19438 455 aa16.33■□□□□ 0.2
SYNE4-202ENST00000340477 EPHA2P29317 976 aa16.33■□□□□ 0.2
SYNE4-202ENST00000340477 CRYBB2P43320 205 aa16.33■□□□□ 0.2
SYNE4-202ENST00000340477 RIPPLY3P57055 190 aa16.33■□□□□ 0.2
SYNE4-202ENST00000340477 SLC3A1Q07837 685 aa16.33■□□□□ 0.2
SYNE4-202ENST00000340477 CDK5R2Q13319 367 aa16.33■□□□□ 0.2
SYNE4-202ENST00000340477 RIN1Q13671 783 aa16.33■□□□□ 0.2
SYNE4-202ENST00000340477 TMEM255AQ5JRV8 349 aa16.33■□□□□ 0.2
SYNE4-202ENST00000340477 KCTD18Q6PI47 426 aaPredicted RBP16.33■□□□□ 0.2
SYNE4-202ENST00000340477 PQLC1Q8N2U9 271 aa16.33■□□□□ 0.2
SYNE4-202ENST00000340477 OR8G5Q8NG78 346 aa16.33■□□□□ 0.2
SYNE4-202ENST00000340477 OR13G1Q8NGZ3 307 aa16.33■□□□□ 0.2
SYNE4-202ENST00000340477 SPRYD4Q8WW59 207 aaPredicted RBP16.33■□□□□ 0.2
SYNE4-202ENST00000340477 TIMD4Q96H15 378 aa16.33■□□□□ 0.2
SYNE4-202ENST00000340477 IL4I1Q96RQ9 567 aa16.33■□□□□ 0.2
SYNE4-202ENST00000340477 TEAD3Q99594 435 aa16.33■□□□□ 0.2
SYNE4-202ENST00000340477 ZNF275Q9NSD4 429 aaPredicted RBP16.33■□□□□ 0.2
SYNE4-202ENST00000340477 NOP16Q9Y3C1 178 aaKnown RBP16.33■□□□□ 0.2
SYNE4-202ENST00000340477 A0A096LNT2 108 aa16.32■□□□□ 0.2
SYNE4-202ENST00000340477 IQCF6A8MYZ5 107 aa16.32■□□□□ 0.2
SYNE4-202ENST00000340477 CLDN25C9JDP6 229 aa16.32■□□□□ 0.2
SYNE4-202ENST00000340477 M0R129 80 aa16.32■□□□□ 0.2
SYNE4-202ENST00000340477 TBX1O43435 398 aa16.32■□□□□ 0.2
SYNE4-202ENST00000340477 XRCC2O43543 280 aa16.32■□□□□ 0.2
SYNE4-202ENST00000340477 CD5LO43866 347 aa16.32■□□□□ 0.2
SYNE4-202ENST00000340477 MRPL3P09001 348 aaKnown RBP16.32■□□□□ 0.2
SYNE4-202ENST00000340477 COL8A2P25067 703 aa16.32■□□□□ 0.2
SYNE4-202ENST00000340477 GZMKP49863 264 aa16.32■□□□□ 0.2
SYNE4-202ENST00000340477 GK2Q14410 553 aaPredicted RBP16.32■□□□□ 0.2
SYNE4-202ENST00000340477 TIGD6Q17RP2 521 aa16.32■□□□□ 0.2
SYNE4-202ENST00000340477 MEPCEQ7L2J0 689 aaKnown RBP16.32■□□□□ 0.2
SYNE4-202ENST00000340477 KRT77Q7Z794 578 aa16.32■□□□□ 0.2
SYNE4-202ENST00000340477 NAA40Q86UY6 237 aa16.32■□□□□ 0.2
SYNE4-202ENST00000340477 CBR4Q8N4T8 237 aa16.32■□□□□ 0.2
SYNE4-202ENST00000340477 BHLHE23Q8NDY6 225 aa16.32■□□□□ 0.2
SYNE4-202ENST00000340477 YIPF5Q969M3 257 aa16.32■□□□□ 0.2
SYNE4-202ENST00000340477 EME1Q96AY2 570 aa16.32■□□□□ 0.2
SYNE4-202ENST00000340477 NIPAL2Q9H841 368 aa16.32■□□□□ 0.2
SYNE4-202ENST00000340477 DNAJC27Q9NZQ0 273 aa16.32■□□□□ 0.2
SYNE4-202ENST00000340477 TLN2Q9Y4G6 2542 aa16.32■□□□□ 0.2
SYNE4-202ENST00000340477 IGHV4-61A0A0C4DH41 118 aa16.31■□□□□ 0.2
SYNE4-202ENST00000340477 GGT3PA6NGU5 568 aa16.31■□□□□ 0.2
SYNE4-202ENST00000340477 OPRL1P41146 370 aa16.31■□□□□ 0.2
SYNE4-202ENST00000340477 GABPB1Q06547 395 aaPredicted RBP16.31■□□□□ 0.2
SYNE4-202ENST00000340477 ZSCAN26Q16670 478 aa16.31■□□□□ 0.2
SYNE4-202ENST00000340477 SNAI3Q3KNW1 292 aa16.31■□□□□ 0.2
SYNE4-202ENST00000340477 CYB5R2Q6BCY4 276 aa16.31■□□□□ 0.2
SYNE4-202ENST00000340477 PEG10Q86TG7 708 aaKnown RBP16.31■□□□□ 0.2
SYNE4-202ENST00000340477 OR52H1Q8NGJ2 320 aa16.31■□□□□ 0.2
SYNE4-202ENST00000340477 OR8J1Q8NGP2 316 aa16.31■□□□□ 0.2
SYNE4-202ENST00000340477 FAM81AQ8TBF8 368 aa16.31■□□□□ 0.2
SYNE4-202ENST00000340477 ASB17Q8WXJ9 295 aa16.31■□□□□ 0.2
SYNE4-202ENST00000340477 RFKQ969G6 155 aa16.31■□□□□ 0.2
SYNE4-202ENST00000340477 MNTQ99583 582 aa16.31■□□□□ 0.2
SYNE4-202ENST00000340477 OR10A2Q9H208 303 aa16.31■□□□□ 0.2
SYNE4-202ENST00000340477 TMEM100Q9NV29 134 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms