RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 STYXL1Q9Y6J8 313 aa4.99□□□□□ -1.61
USF3-202ENST00000478658 FAM208AQ9UK61 1670 aaKnown RBP4.99□□□□□ -1.61
USF3-202ENST00000478658 ABCC3O15438 1527 aa4.99□□□□□ -1.61
USF3-202ENST00000478658 PTPRUQ92729 1446 aa4.99□□□□□ -1.61
USF3-202ENST00000478658 OR4C45A6NMZ5 311 aa4.99□□□□□ -1.61
USF3-202ENST00000478658 TMEM262E9PQX1 116 aa4.99□□□□□ -1.61
USF3-202ENST00000478658 NKX2-8O15522 239 aa4.99□□□□□ -1.61
USF3-202ENST00000478658 CD99P14209 185 aa4.99□□□□□ -1.61
USF3-202ENST00000478658 FGF7P21781 194 aa4.99□□□□□ -1.61
USF3-202ENST00000478658 TMEM258P61165 79 aa4.99□□□□□ -1.61
USF3-202ENST00000478658 SIM1P81133 766 aaPredicted RBP4.99□□□□□ -1.61
USF3-202ENST00000478658 CDC20Q12834 499 aa4.99□□□□□ -1.61
USF3-202ENST00000478658 H3F3CQ6NXT2 135 aa4.99□□□□□ -1.61
USF3-202ENST00000478658 PDZD3Q86UT5 571 aa4.99□□□□□ -1.61
USF3-202ENST00000478658 NANOGP1Q8N7R0 232 aa4.99□□□□□ -1.61
USF3-202ENST00000478658 DCAF4L2Q8NA75 395 aa4.99□□□□□ -1.61
USF3-202ENST00000478658 OR51A7Q8NH64 312 aa4.99□□□□□ -1.61
USF3-202ENST00000478658 WDR83Q9BRX9 315 aaKnown RBP4.99□□□□□ -1.61
USF3-202ENST00000478658 NXF2Q9GZY0 626 aaKnown RBP4.99□□□□□ -1.61
USF3-202ENST00000478658 MYO3AQ8NEV4 1616 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 PRDM15P57071 1507 aaPredicted RBP4.98□□□□□ -1.61
USF3-202ENST00000478658 hCG_1818297A0A087WSY0 165 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 IFITM10A6NMD0 228 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 A8MWL6 223 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 AKR7A2O43488 359 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 ALPLP05186 524 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 CD40P25942 277 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 TIA1P31483 386 aaKnown RBP eCLIP4.98□□□□□ -1.61
USF3-202ENST00000478658 GALR1P47211 349 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 SULT1A1P50225 295 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 EMP1P54849 157 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 ARSIQ5FYB1 569 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 PRR27Q6MZM9 219 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 AMIGO2Q86SJ2 522 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 LRP11Q86VZ4 500 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 OR6S1Q8NH40 331 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 RHBDD1Q8TEB9 315 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 SPAG8Q99932 426 aaPredicted RBP4.98□□□□□ -1.61
USF3-202ENST00000478658 NAA50Q9GZZ1 169 aaKnown RBP4.98□□□□□ -1.61
USF3-202ENST00000478658 RAXQ9Y2V3 346 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 TRAV18A0A075B6X5 111 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 SLC17A3O00476 420 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 B4GALT5O43286 388 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 XRCC3O43542 346 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 NDUFB3O43676 98 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 CHST1O43916 411 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 MYOD1P15172 320 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 CD1EP15812 388 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 GCAP28676 217 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 SGSHP51688 502 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 SUCLG1P53597 346 aaKnown RBP4.98□□□□□ -1.61
USF3-202ENST00000478658 ZNF280AP59817 542 aaPredicted RBP4.98□□□□□ -1.61
USF3-202ENST00000478658 KHDC3LQ587J8 217 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 C6orf132Q5T0Z8 1188 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 GPR32P1Q8NGA4 272 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 OR6M1Q8NGM8 313 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 C4orf36Q96KX1 117 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 RASL11BQ9BPW5 248 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 CABLES2Q9BTV7 478 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 ANKRD60Q9BZ19 345 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 TAF9BQ9HBM6 251 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 OLAHQ9NV23 265 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 STARD10Q9Y365 291 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 CSNK1G3Q9Y6M4 447 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 LOC285095A0A1B0GVY8 99 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 KIAA0513O60268 411 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 GJB3O75712 270 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 GUSBP08236 651 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 POU2AF1Q16633 256 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 OR7E24Q6IFN5 339 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 SFT2D1Q8WV19 159 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 LRTOMTQ8WZ04 291 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 RAB40CQ96S21 281 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 VWDEQ8N2E2 1590 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 ST8SIA3O43173 380 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 CKMT2P17540 419 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 MMP8P22894 467 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 MRPL58Q14197 206 aaKnown RBP4.98□□□□□ -1.61
USF3-202ENST00000478658 CTF1Q16619 201 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 NADSYN1Q6IA69 706 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 LYPD4Q6UWN0 246 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 MRGPREQ86SM8 312 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 TBC1D10CQ8IV04 446 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 DCBLD1Q8N8Z6 715 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 IL22RA2Q969J5 263 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 FAM210BQ96KR6 192 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 OPN3Q9H1Y3 402 aaPredicted RBP4.98□□□□□ -1.61
USF3-202ENST00000478658 C8orf89P0DMQ9 161 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 NQO2P16083 231 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 DDOSTP39656 456 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 OR1C1Q15619 314 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 BAK1Q16611 211 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 ANKRD33Q7Z3H0 272 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 MOGAT3Q86VF5 341 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 SLC25A40Q8TBP6 338 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 TMIGD2Q96BF3 282 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 SLC25A32Q9H2D1 315 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 ADGRL4Q9HBW9 690 aa4.98□□□□□ -1.61
USF3-202ENST00000478658 CNOT2Q9NZN8 540 aaKnown RBP4.98□□□□□ -1.61
USF3-202ENST00000478658 PTRH2Q9Y3E5 179 aaKnown RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms