RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 CTAG2O75638 210 aa16.06■□□□□ 0.16
SMPD3-211ENST00000568373 DHFRP00374 187 aa16.06■□□□□ 0.16
SMPD3-211ENST00000568373 HSD11B1P28845 292 aa16.06■□□□□ 0.16
SMPD3-211ENST00000568373 EFNB2P52799 333 aa16.06■□□□□ 0.16
SMPD3-211ENST00000568373 RRAS2P62070 204 aaPredicted RBP16.06■□□□□ 0.16
SMPD3-211ENST00000568373 OR6N1Q8NGY5 312 aa16.06■□□□□ 0.16
SMPD3-211ENST00000568373 KCNE4Q8WWG9 221 aa16.06■□□□□ 0.16
SMPD3-211ENST00000568373 TMEM54Q969K7 222 aa16.06■□□□□ 0.16
SMPD3-211ENST00000568373 SLC25A28Q96A46 364 aa16.06■□□□□ 0.16
SMPD3-211ENST00000568373 ZNF486Q96H40 463 aaPredicted RBP16.06■□□□□ 0.16
SMPD3-211ENST00000568373 FYTTD1Q96QD9 318 aaKnown RBP16.06■□□□□ 0.16
SMPD3-211ENST00000568373 BEX2Q9BXY8 128 aa16.06■□□□□ 0.16
SMPD3-211ENST00000568373 MOB1AQ9H8S9 216 aa16.06■□□□□ 0.16
SMPD3-211ENST00000568373 SLC17A5Q9NRA2 495 aa16.06■□□□□ 0.16
SMPD3-211ENST00000568373 ZNF275Q9NSD4 429 aaPredicted RBP16.06■□□□□ 0.16
SMPD3-211ENST00000568373 KLK11Q9UBX7 282 aa16.06■□□□□ 0.16
SMPD3-211ENST00000568373 NCKAP5O14513 1909 aa16.06■□□□□ 0.16
SMPD3-211ENST00000568373 TERTO14746 1132 aaKnown RBP16.06■□□□□ 0.16
SMPD3-211ENST00000568373 LMX1BO60663 402 aa16.06■□□□□ 0.16
SMPD3-211ENST00000568373 PTHLHP12272 177 aa16.06■□□□□ 0.16
SMPD3-211ENST00000568373 HTR2CP28335 458 aa16.06■□□□□ 0.16
SMPD3-211ENST00000568373 CCR6P51684 374 aa16.06■□□□□ 0.16
SMPD3-211ENST00000568373 OC90Q02509 493 aaPredicted RBP16.06■□□□□ 0.16
SMPD3-211ENST00000568373 GLYATL3Q5SZD4 288 aa16.06■□□□□ 0.16
SMPD3-211ENST00000568373 C10orf128Q5T292 105 aa16.06■□□□□ 0.16
SMPD3-211ENST00000568373 DHRS13Q6UX07 377 aa16.06■□□□□ 0.16
SMPD3-211ENST00000568373 DNM1P46Q6ZS02 220 aa16.06■□□□□ 0.16
SMPD3-211ENST00000568373 THOC3Q96J01 351 aaKnown RBP16.06■□□□□ 0.16
SMPD3-211ENST00000568373 LRFN3Q9BTN0 628 aa16.06■□□□□ 0.16
SMPD3-211ENST00000568373 SRXN1Q9BYN0 137 aa16.06■□□□□ 0.16
SMPD3-211ENST00000568373 PNRC2Q9NPJ4 139 aaKnown RBP16.06■□□□□ 0.16
SMPD3-211ENST00000568373 DEPPQ9NTK1 212 aa16.06■□□□□ 0.16
SMPD3-211ENST00000568373 GGT3PA6NGU5 568 aa16.05■□□□□ 0.16
SMPD3-211ENST00000568373 RER1O15258 196 aa16.05■□□□□ 0.16
SMPD3-211ENST00000568373 RFPL3SP0C7P2 107 aa16.05■□□□□ 0.16
SMPD3-211ENST00000568373 ENPP1P22413 925 aa16.05■□□□□ 0.16
SMPD3-211ENST00000568373 ZNF133P52736 654 aaPredicted RBP16.05■□□□□ 0.16
SMPD3-211ENST00000568373 RAC3P60763 192 aa16.05■□□□□ 0.16
SMPD3-211ENST00000568373 SPOCK1Q08629 439 aa16.05■□□□□ 0.16
SMPD3-211ENST00000568373 TAF13Q15543 124 aa16.05■□□□□ 0.16
SMPD3-211ENST00000568373 TMEM123Q8N131 208 aa16.05■□□□□ 0.16
SMPD3-211ENST00000568373 NKAIN3Q8N8D7 197 aa16.05■□□□□ 0.16
SMPD3-211ENST00000568373 OR6M1Q8NGM8 313 aa16.05■□□□□ 0.16
SMPD3-211ENST00000568373 AKAP1Q92667 903 aaKnown RBP eCLIP16.05■□□□□ 0.16
SMPD3-211ENST00000568373 NKX3-1Q99801 234 aaPredicted RBP16.05■□□□□ 0.16
SMPD3-211ENST00000568373 KCNK15Q9H427 330 aa16.05■□□□□ 0.16
SMPD3-211ENST00000568373 STMN3Q9NZ72 180 aa16.05■□□□□ 0.16
SMPD3-211ENST00000568373 MRPL15Q9P015 296 aaKnown RBP16.05■□□□□ 0.16
SMPD3-211ENST00000568373 PCDHGA1Q9Y5H4 931 aa16.05■□□□□ 0.16
SMPD3-211ENST00000568373 A0A0A6YYJ9 748 aa16.04■□□□□ 0.16
SMPD3-211ENST00000568373 TMEM272A0A1B0GTI8 110 aa16.04■□□□□ 0.16
SMPD3-211ENST00000568373 SYT7O43581 403 aa16.04■□□□□ 0.16
SMPD3-211ENST00000568373 LSM6P62312 80 aaKnown RBP16.04■□□□□ 0.16
SMPD3-211ENST00000568373 PHYHD1Q5SRE7 291 aa16.04■□□□□ 0.16
SMPD3-211ENST00000568373 LUZP2Q86TE4 346 aa16.04■□□□□ 0.16
SMPD3-211ENST00000568373 TCTE3Q8IZS6 198 aa16.04■□□□□ 0.16
SMPD3-211ENST00000568373 SCMH1Q96GD3 660 aa16.04■□□□□ 0.16
SMPD3-211ENST00000568373 HRASLSQ9HDD0 168 aa16.04■□□□□ 0.16
SMPD3-211ENST00000568373 DIABLOQ9NR28 239 aa16.04■□□□□ 0.16
SMPD3-211ENST00000568373 MCUBQ9NWR8 336 aa16.04■□□□□ 0.16
SMPD3-211ENST00000568373 CGGBP1Q9UFW8 167 aaPredicted RBP16.04■□□□□ 0.16
SMPD3-211ENST00000568373 NCOA6Q14686 2063 aaPredicted RBP16.04■□□□□ 0.16
SMPD3-211ENST00000568373 LOC390937A0A1W2PQ73 354 aa16.04■□□□□ 0.16
SMPD3-211ENST00000568373 ANKRD20A5PA0PJZ0 165 aa16.04■□□□□ 0.16
SMPD3-211ENST00000568373 DCDC2BA2VCK2 349 aa16.04■□□□□ 0.16
SMPD3-211ENST00000568373 C7orf66A4D0T2 115 aa16.04■□□□□ 0.16
SMPD3-211ENST00000568373 SMAD9O15198 467 aaKnown RBP16.04■□□□□ 0.16
SMPD3-211ENST00000568373 WDPCPO95876 746 aa16.04■□□□□ 0.16
SMPD3-211ENST00000568373 GSTT2BP0CG30 244 aa16.04■□□□□ 0.16
SMPD3-211ENST00000568373 GUCA1AP43080 201 aaPredicted RBP16.04■□□□□ 0.16
SMPD3-211ENST00000568373 HES3Q5TGS1 186 aa16.04■□□□□ 0.16
SMPD3-211ENST00000568373 JMJD6Q6NYC1 403 aaPredicted RBP16.04■□□□□ 0.16
SMPD3-211ENST00000568373 BTN2A1Q7KYR7 527 aa16.04■□□□□ 0.16
SMPD3-211ENST00000568373 BIVMQ86UB2 503 aa16.04■□□□□ 0.16
SMPD3-211ENST00000568373 GGNQ86UU5 652 aa16.04■□□□□ 0.16
SMPD3-211ENST00000568373 ZIC4Q8N9L1 334 aa16.04■□□□□ 0.16
SMPD3-211ENST00000568373 FGGYQ96C11 551 aa16.04■□□□□ 0.16
SMPD3-211ENST00000568373 SF3B5Q9BWJ5 86 aaKnown RBP16.04■□□□□ 0.16
SMPD3-211ENST00000568373 OR2B2Q9GZK3 357 aa16.04■□□□□ 0.16
SMPD3-211ENST00000568373 MRPS18BQ9Y676 258 aaKnown RBP16.04■□□□□ 0.16
SMPD3-211ENST00000568373 CIB4A0PJX0 185 aa16.03■□□□□ 0.16
SMPD3-211ENST00000568373 NAP1L6A6NFF2 107 aa16.03■□□□□ 0.16
SMPD3-211ENST00000568373 MSR1P21757 451 aa16.03■□□□□ 0.16
SMPD3-211ENST00000568373 PRKXP51817 358 aa16.03■□□□□ 0.16
SMPD3-211ENST00000568373 RAG2P55895 527 aa16.03■□□□□ 0.16
SMPD3-211ENST00000568373 SGCAQ16586 387 aa16.03■□□□□ 0.16
SMPD3-211ENST00000568373 FOXL2NBQ6ZUU3 175 aa16.03■□□□□ 0.16
SMPD3-211ENST00000568373 UTS2BQ765I0 119 aa16.03■□□□□ 0.16
SMPD3-211ENST00000568373 LYPD6Q86Y78 171 aa16.03■□□□□ 0.16
SMPD3-211ENST00000568373 JAGN1Q8N5M9 183 aa16.03■□□□□ 0.16
SMPD3-211ENST00000568373 SFXN2Q96NB2 322 aa16.03■□□□□ 0.16
SMPD3-211ENST00000568373 ZNF416Q9BWM5 594 aa16.03■□□□□ 0.16
SMPD3-211ENST00000568373 NELFAQ9H3P2 528 aa16.03■□□□□ 0.16
SMPD3-211ENST00000568373 LRFN1Q9P244 771 aa16.03■□□□□ 0.16
SMPD3-211ENST00000568373 MRPS18CQ9Y3D5 142 aaKnown RBP16.03■□□□□ 0.16
SMPD3-211ENST00000568373 GMDSO60547 372 aa16.03■□□□□ 0.16
SMPD3-211ENST00000568373 F10P00742 488 aa16.03■□□□□ 0.16
SMPD3-211ENST00000568373 CNR1P21554 472 aa16.03■□□□□ 0.16
SMPD3-211ENST00000568373 SELENOPP49908 381 aa16.03■□□□□ 0.16
SMPD3-211ENST00000568373 SUCLG1P53597 346 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms