RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 ZNF511Q8NB15 262 aa13.63□□□□□ -0.23
CLPTM1-202ENST00000541297 FOXN4Q96NZ1 517 aa13.63□□□□□ -0.23
CLPTM1-202ENST00000541297 CNN2Q99439 309 aaKnown RBP13.63□□□□□ -0.23
CLPTM1-202ENST00000541297 ALG12Q9BV10 488 aa13.63□□□□□ -0.23
CLPTM1-202ENST00000541297 LRFN1Q9P244 771 aa13.63□□□□□ -0.23
CLPTM1-202ENST00000541297 SLC22A23A1A5C7 686 aa13.63□□□□□ -0.23
CLPTM1-202ENST00000541297 KHDRBS3O75525 346 aaKnown RBP13.63□□□□□ -0.23
CLPTM1-202ENST00000541297 CEACAM1P13688 526 aa13.63□□□□□ -0.23
CLPTM1-202ENST00000541297 CSRP1P21291 193 aaKnown RBP13.63□□□□□ -0.23
CLPTM1-202ENST00000541297 RPL27P61353 136 aaKnown RBP13.63□□□□□ -0.23
CLPTM1-202ENST00000541297 OTPQ5XKR4 325 aa13.63□□□□□ -0.23
CLPTM1-202ENST00000541297 OR6V1Q8N148 313 aa13.63□□□□□ -0.23
CLPTM1-202ENST00000541297 FBXW5Q969U6 566 aa13.63□□□□□ -0.23
CLPTM1-202ENST00000541297 ZBTB8AQ96BR9 441 aa13.63□□□□□ -0.23
CLPTM1-202ENST00000541297 PLEKHA1Q9HB21 404 aa13.63□□□□□ -0.23
CLPTM1-202ENST00000541297 DEPPQ9NTK1 212 aa13.63□□□□□ -0.23
CLPTM1-202ENST00000541297 ING1Q9UK53 422 aaPredicted RBP13.63□□□□□ -0.23
CLPTM1-202ENST00000541297 SESN1Q9Y6P5 492 aa13.63□□□□□ -0.23
CLPTM1-202ENST00000541297 TM4SF5O14894 197 aa13.62□□□□□ -0.23
CLPTM1-202ENST00000541297 GIPP09681 153 aaPredicted RBP13.62□□□□□ -0.23
CLPTM1-202ENST00000541297 IL32P24001 234 aa13.62□□□□□ -0.23
CLPTM1-202ENST00000541297 EIF1P41567 113 aaKnown RBP13.62□□□□□ -0.23
CLPTM1-202ENST00000541297 DIO1P49895 249 aa13.62□□□□□ -0.23
CLPTM1-202ENST00000541297 DSCR4P56555 118 aaPredicted RBP13.62□□□□□ -0.23
CLPTM1-202ENST00000541297 CLDN12P56749 244 aa13.62□□□□□ -0.23
CLPTM1-202ENST00000541297 ACTC1P68032 377 aa13.62□□□□□ -0.23
CLPTM1-202ENST00000541297 ACTA1P68133 377 aa13.62□□□□□ -0.23
CLPTM1-202ENST00000541297 SIRPAP78324 504 aa13.62□□□□□ -0.23
CLPTM1-202ENST00000541297 LINC00303Q3SY05 128 aa13.62□□□□□ -0.23
CLPTM1-202ENST00000541297 EMC4Q5J8M3 183 aa13.62□□□□□ -0.23
CLPTM1-202ENST00000541297 LINC01590Q5TEZ4 76 aa13.62□□□□□ -0.23
CLPTM1-202ENST00000541297 ABHD17BQ5VST6 288 aa13.62□□□□□ -0.23
CLPTM1-202ENST00000541297 H1FNTQ75WM6 255 aaPredicted RBP13.62□□□□□ -0.23
CLPTM1-202ENST00000541297 STPG2Q8N412 459 aa13.62□□□□□ -0.23
CLPTM1-202ENST00000541297 CLEC1AQ8NC01 280 aa13.62□□□□□ -0.23
CLPTM1-202ENST00000541297 SLC25A38Q96DW6 304 aa13.62□□□□□ -0.23
CLPTM1-202ENST00000541297 GFI1Q99684 422 aa13.62□□□□□ -0.23
CLPTM1-202ENST00000541297 SLC25A18Q9H1K4 315 aa13.62□□□□□ -0.23
CLPTM1-202ENST00000541297 PLA2G3Q9NZ20 509 aa13.62□□□□□ -0.23
CLPTM1-202ENST00000541297 TRBV2A0A0J9YWF9 115 aa13.62□□□□□ -0.23
CLPTM1-202ENST00000541297 GABARAPH6UMI1 98 aa13.62□□□□□ -0.23
CLPTM1-202ENST00000541297 MTRF1O75570 445 aaKnown RBP13.62□□□□□ -0.23
CLPTM1-202ENST00000541297 KRT33AO76009 404 aa13.62□□□□□ -0.23
CLPTM1-202ENST00000541297 GLCEO94923 617 aa13.62□□□□□ -0.23
CLPTM1-202ENST00000541297 ECDO95905 644 aaPredicted RBP13.62□□□□□ -0.23
CLPTM1-202ENST00000541297 RENP00797 406 aa13.62□□□□□ -0.23
CLPTM1-202ENST00000541297 IFNGR1P15260 489 aa13.62□□□□□ -0.23
CLPTM1-202ENST00000541297 CD96P40200 585 aa13.62□□□□□ -0.23
CLPTM1-202ENST00000541297 MAGEB1P43366 347 aa13.62□□□□□ -0.23
CLPTM1-202ENST00000541297 POU3F1Q03052 451 aaPredicted RBP13.62□□□□□ -0.23
CLPTM1-202ENST00000541297 POU4F2Q12837 409 aa13.62□□□□□ -0.23
CLPTM1-202ENST00000541297 HLXQ14774 488 aaPredicted RBP13.62□□□□□ -0.23
CLPTM1-202ENST00000541297 ELFN2Q5R3F8 820 aa13.62□□□□□ -0.23
CLPTM1-202ENST00000541297 FCRLAQ7L513 359 aa13.62□□□□□ -0.23
CLPTM1-202ENST00000541297 WDFY1Q8IWB7 410 aa13.62□□□□□ -0.23
CLPTM1-202ENST00000541297 ZNF248Q8NDW4 579 aa13.62□□□□□ -0.23
CLPTM1-202ENST00000541297 SIGLEC12Q96PQ1 595 aa13.62□□□□□ -0.23
CLPTM1-202ENST00000541297 POTEKPQ9BYX7 375 aa13.62□□□□□ -0.23
CLPTM1-202ENST00000541297 TXNIPQ9H3M7 391 aa13.62□□□□□ -0.23
CLPTM1-202ENST00000541297 CHST11Q9NPF2 352 aa13.62□□□□□ -0.23
CLPTM1-202ENST00000541297 NOX4Q9NPH5 578 aa13.62□□□□□ -0.23
CLPTM1-202ENST00000541297 KLHL9Q9P2J3 617 aa13.62□□□□□ -0.23
CLPTM1-202ENST00000541297 CACNA1CQ13936 2221 aa13.62□□□□□ -0.23
CLPTM1-202ENST00000541297 TVP23AA6NH52 213 aa13.61□□□□□ -0.23
CLPTM1-202ENST00000541297 ZIC3O60481 467 aa13.61□□□□□ -0.23
CLPTM1-202ENST00000541297 RFPL3SP0C7P2 107 aa13.61□□□□□ -0.23
CLPTM1-202ENST00000541297 SRMP19623 302 aa13.61□□□□□ -0.23
CLPTM1-202ENST00000541297 KLK2P20151 261 aa13.61□□□□□ -0.23
CLPTM1-202ENST00000541297 PSMB10P40306 273 aa13.61□□□□□ -0.23
CLPTM1-202ENST00000541297 AIMP2Q13155 320 aaKnown RBP13.61□□□□□ -0.23
CLPTM1-202ENST00000541297 ZNF273Q14593 569 aa13.61□□□□□ -0.23
CLPTM1-202ENST00000541297 SLC35F2Q8IXU6 374 aa13.61□□□□□ -0.23
CLPTM1-202ENST00000541297 ZNF433Q8N7K0 673 aaPredicted RBP13.61□□□□□ -0.23
CLPTM1-202ENST00000541297 EXD3Q8N9H8 876 aa13.61□□□□□ -0.23
CLPTM1-202ENST00000541297 OR52H1Q8NGJ2 320 aa13.61□□□□□ -0.23
CLPTM1-202ENST00000541297 ZNF519Q8TB69 540 aa13.61□□□□□ -0.23
CLPTM1-202ENST00000541297 FCAMRQ8WWV6 532 aa13.61□□□□□ -0.23
CLPTM1-202ENST00000541297 NTNG2Q96CW9 530 aa13.61□□□□□ -0.23
CLPTM1-202ENST00000541297 TMEM41AQ96HV5 264 aa13.61□□□□□ -0.23
CLPTM1-202ENST00000541297 MED29Q9NX70 200 aa13.61□□□□□ -0.23
CLPTM1-202ENST00000541297 ALKBH4Q9NXW9 302 aa13.61□□□□□ -0.23
CLPTM1-202ENST00000541297 GNG8Q9UK08 70 aa13.61□□□□□ -0.23
CLPTM1-202ENST00000541297 OR2M5A3KFT3 312 aa13.61□□□□□ -0.23
CLPTM1-202ENST00000541297 PINLYPA6NC86 204 aa13.61□□□□□ -0.23
CLPTM1-202ENST00000541297 NAP1L6A6NFF2 107 aa13.61□□□□□ -0.23
CLPTM1-202ENST00000541297 ARGFXA6NJG6 315 aa13.61□□□□□ -0.23
CLPTM1-202ENST00000541297 A8MXK9 166 aa13.61□□□□□ -0.23
CLPTM1-202ENST00000541297 CBR3O75828 277 aa13.61□□□□□ -0.23
CLPTM1-202ENST00000541297 CPN1P15169 458 aa13.61□□□□□ -0.23
CLPTM1-202ENST00000541297 PRKACAP17612 351 aa13.61□□□□□ -0.23
CLPTM1-202ENST00000541297 EDNRAP25101 427 aa13.61□□□□□ -0.23
CLPTM1-202ENST00000541297 ADH6P28332 368 aa13.61□□□□□ -0.23
CLPTM1-202ENST00000541297 RAP2BP61225 183 aa13.61□□□□□ -0.23
CLPTM1-202ENST00000541297 RIPPLY1Q0D2K3 151 aa13.61□□□□□ -0.23
CLPTM1-202ENST00000541297 GGTLC2Q14390 218 aa13.61□□□□□ -0.23
CLPTM1-202ENST00000541297 SLC35D3Q5M8T2 416 aa13.61□□□□□ -0.23
CLPTM1-202ENST00000541297 JMJD6Q6NYC1 403 aaPredicted RBP13.61□□□□□ -0.23
CLPTM1-202ENST00000541297 OVCH2Q7RTZ1 564 aa13.61□□□□□ -0.23
CLPTM1-202ENST00000541297 YRDCQ86U90 279 aaKnown RBP13.61□□□□□ -0.23
CLPTM1-202ENST00000541297 GTPBP8Q8N3Z3 284 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms