RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 NMRAL1Q9HBL8 299 aa5.05□□□□□ -1.6
HDAC3-206ENST00000471968 CPSF2Q9P2I0 782 aaKnown RBP5.05□□□□□ -1.6
HDAC3-206ENST00000471968 STARD10Q9Y365 291 aa5.05□□□□□ -1.6
HDAC3-206ENST00000471968 POLR3HQ9Y535 204 aaPredicted RBP5.05□□□□□ -1.6
HDAC3-206ENST00000471968 TEX264Q9Y6I9 313 aa5.05□□□□□ -1.6
HDAC3-206ENST00000471968 LOC102725191A0A1B0GVB3 256 aa5.04□□□□□ -1.6
HDAC3-206ENST00000471968 MAGEA13PA6NCF6 341 aa5.04□□□□□ -1.6
HDAC3-206ENST00000471968 CFAP73A6NFT4 308 aa5.04□□□□□ -1.6
HDAC3-206ENST00000471968 SERPINE3A8MV23 424 aa5.04□□□□□ -1.6
HDAC3-206ENST00000471968 FAM90A22PA8MWA6 464 aa5.04□□□□□ -1.6
HDAC3-206ENST00000471968 GOLGA6L6A8MZA4 724 aa5.04□□□□□ -1.6
HDAC3-206ENST00000471968 NPHS1O60500 1241 aa5.04□□□□□ -1.6
HDAC3-206ENST00000471968 PIAS1O75925 651 aa5.04□□□□□ -1.6
HDAC3-206ENST00000471968 IPO7O95373 1038 aaKnown RBP5.04□□□□□ -1.6
HDAC3-206ENST00000471968 KRT16P08779 473 aa5.04□□□□□ -1.6
HDAC3-206ENST00000471968 GRPRP30550 384 aa5.04□□□□□ -1.6
HDAC3-206ENST00000471968 MAGEA4P43358 317 aa5.04□□□□□ -1.6
HDAC3-206ENST00000471968 SLC9A3P48764 834 aa5.04□□□□□ -1.6
HDAC3-206ENST00000471968 BIDP55957 195 aa5.04□□□□□ -1.6
HDAC3-206ENST00000471968 RPS26P62854 115 aaKnown RBP5.04□□□□□ -1.6
HDAC3-206ENST00000471968 ERVK-25P63136 954 aa5.04□□□□□ -1.6
HDAC3-206ENST00000471968 PSG4Q00888 419 aa5.04□□□□□ -1.6
HDAC3-206ENST00000471968 EPS8Q12929 822 aa5.04□□□□□ -1.6
HDAC3-206ENST00000471968 NAB1Q13506 487 aa5.04□□□□□ -1.6
HDAC3-206ENST00000471968 GSTA3Q16772 222 aa5.04□□□□□ -1.6
HDAC3-206ENST00000471968 MS4A18Q3C1V0 323 aa5.04□□□□□ -1.6
HDAC3-206ENST00000471968 SOHLH1Q5JUK2 328 aa5.04□□□□□ -1.6
HDAC3-206ENST00000471968 SPDYAQ5MJ70 313 aa5.04□□□□□ -1.6
HDAC3-206ENST00000471968 AP1ARQ63HQ0 302 aa5.04□□□□□ -1.6
HDAC3-206ENST00000471968 NXNQ6DKJ4 435 aa5.04□□□□□ -1.6
HDAC3-206ENST00000471968 TEX38Q6PEX7 206 aa5.04□□□□□ -1.6
HDAC3-206ENST00000471968 ZNF836Q6ZNA1 936 aa5.04□□□□□ -1.6
HDAC3-206ENST00000471968 RPS27LQ71UM5 84 aaKnown RBP5.04□□□□□ -1.6
HDAC3-206ENST00000471968 H1FNTQ75WM6 255 aaPredicted RBP5.04□□□□□ -1.6
HDAC3-206ENST00000471968 SLC36A1Q7Z2H8 476 aa5.04□□□□□ -1.6
HDAC3-206ENST00000471968 LYG2Q86SG7 212 aa5.04□□□□□ -1.6
HDAC3-206ENST00000471968 HOMEZQ8IX15 550 aa5.04□□□□□ -1.6
HDAC3-206ENST00000471968 CLDN22Q8N7P3 220 aa5.04□□□□□ -1.6
HDAC3-206ENST00000471968 GOLGA6L1Q8N7Z2 621 aa5.04□□□□□ -1.6
HDAC3-206ENST00000471968 LRRC57Q8N9N7 239 aa5.04□□□□□ -1.6
HDAC3-206ENST00000471968 OR1N2Q8NGR9 330 aa5.04□□□□□ -1.6
HDAC3-206ENST00000471968 C4orf3Q8WVX3 66 aa5.04□□□□□ -1.6
HDAC3-206ENST00000471968 ARPC1AQ92747 370 aa5.04□□□□□ -1.6
HDAC3-206ENST00000471968 PTP4A1Q93096 173 aa5.04□□□□□ -1.6
HDAC3-206ENST00000471968 MPP4Q96JB8 637 aa5.04□□□□□ -1.6
HDAC3-206ENST00000471968 EGLN2Q96KS0 407 aa5.04□□□□□ -1.6
HDAC3-206ENST00000471968 NAT9Q9BTE0 207 aa5.04□□□□□ -1.6
HDAC3-206ENST00000471968 ZNF350Q9GZX5 532 aa5.04□□□□□ -1.6
HDAC3-206ENST00000471968 PAIP1Q9H074 479 aaKnown RBP5.04□□□□□ -1.6
HDAC3-206ENST00000471968 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.04□□□□□ -1.6
HDAC3-206ENST00000471968 ACTR3BQ9P1U1 418 aa5.04□□□□□ -1.6
HDAC3-206ENST00000471968 PCTPQ9UKL6 214 aa5.04□□□□□ -1.6
HDAC3-206ENST00000471968 HILPDAQ9Y5L2 63 aa5.04□□□□□ -1.6
HDAC3-206ENST00000471968 A0A1W2PPM1 405 aa5.03□□□□□ -1.6
HDAC3-206ENST00000471968 KRTAP29-1A8MX34 341 aaPredicted RBP5.03□□□□□ -1.6
HDAC3-206ENST00000471968 MIF4GDA9UHW6 222 aaKnown RBP5.03□□□□□ -1.6
HDAC3-206ENST00000471968 FAAHO00519 579 aa5.03□□□□□ -1.6
HDAC3-206ENST00000471968 ACOT8O14734 319 aa5.03□□□□□ -1.6
HDAC3-206ENST00000471968 SUPT7LO94864 414 aa5.03□□□□□ -1.6
HDAC3-206ENST00000471968 OR4F21O95013 312 aa5.03□□□□□ -1.6
HDAC3-206ENST00000471968 KRT14P02533 472 aa5.03□□□□□ -1.6
HDAC3-206ENST00000471968 KRT6AP02538 564 aa5.03□□□□□ -1.6
HDAC3-206ENST00000471968 KRT6BP04259 564 aa5.03□□□□□ -1.6
HDAC3-206ENST00000471968 ARG1P05089 322 aa5.03□□□□□ -1.6
HDAC3-206ENST00000471968 RAC2P15153 192 aa5.03□□□□□ -1.6
HDAC3-206ENST00000471968 PRPS1L1P21108 318 aa5.03□□□□□ -1.6
HDAC3-206ENST00000471968 TUBG1P23258 451 aa5.03□□□□□ -1.6
HDAC3-206ENST00000471968 ECHS1P30084 290 aa5.03□□□□□ -1.6
HDAC3-206ENST00000471968 ARRB2P32121 409 aa5.03□□□□□ -1.6
HDAC3-206ENST00000471968 KRT6CP48668 564 aa5.03□□□□□ -1.6
HDAC3-206ENST00000471968 ENTPD1P49961 510 aa5.03□□□□□ -1.6
HDAC3-206ENST00000471968 OR12D2P58182 307 aa5.03□□□□□ -1.6
HDAC3-206ENST00000471968 TNFRSF9Q07011 255 aa5.03□□□□□ -1.6
HDAC3-206ENST00000471968 ZNF616Q08AN1 781 aa5.03□□□□□ -1.6
HDAC3-206ENST00000471968 TRAP1Q12931 704 aaKnown RBP5.03□□□□□ -1.6
HDAC3-206ENST00000471968 ZKSCAN8Q15776 578 aaPredicted RBP5.03□□□□□ -1.6
HDAC3-206ENST00000471968 LSM12Q3MHD2 195 aaKnown RBP5.03□□□□□ -1.6
HDAC3-206ENST00000471968 SPDYE7PQ495Y7 208 aa5.03□□□□□ -1.6
HDAC3-206ENST00000471968 CXorf66Q5JRM2 361 aaPredicted RBP5.03□□□□□ -1.6
HDAC3-206ENST00000471968 TYW3Q6IPR3 259 aaKnown RBP5.03□□□□□ -1.6
HDAC3-206ENST00000471968 METTL2BQ6P1Q9 378 aaKnown RBP5.03□□□□□ -1.6
HDAC3-206ENST00000471968 C1orf94Q6P1W5 598 aa5.03□□□□□ -1.6
HDAC3-206ENST00000471968 TSEN54Q7Z6J9 526 aaKnown RBP5.03□□□□□ -1.6
HDAC3-206ENST00000471968 GTSCR1Q86UQ5 136 aa5.03□□□□□ -1.6
HDAC3-206ENST00000471968 CELF2-AS1Q8N7Q2 184 aa5.03□□□□□ -1.6
HDAC3-206ENST00000471968 PTGR2Q8N8N7 351 aaPredicted RBP5.03□□□□□ -1.6
HDAC3-206ENST00000471968 NAT8LQ8N9F0 302 aa5.03□□□□□ -1.6
HDAC3-206ENST00000471968 STK35Q8TDR2 534 aa5.03□□□□□ -1.6
HDAC3-206ENST00000471968 MCHR2Q969V1 340 aa5.03□□□□□ -1.6
HDAC3-206ENST00000471968 CPPED1Q9BRF8 314 aaPredicted RBP5.03□□□□□ -1.6
HDAC3-206ENST00000471968 OVOL2Q9BRP0 275 aa5.03□□□□□ -1.6
HDAC3-206ENST00000471968 DGCR6LQ9BY27 220 aa5.03□□□□□ -1.6
HDAC3-206ENST00000471968 WNT5BQ9H1J7 359 aa5.03□□□□□ -1.6
HDAC3-206ENST00000471968 PLEKHA3Q9HB20 300 aa5.03□□□□□ -1.6
HDAC3-206ENST00000471968 TUBG2Q9NRH3 451 aa5.03□□□□□ -1.6
HDAC3-206ENST00000471968 TMEM100Q9NV29 134 aa5.03□□□□□ -1.6
HDAC3-206ENST00000471968 ING3Q9NXR8 418 aa5.03□□□□□ -1.6
HDAC3-206ENST00000471968 SH3BP4Q9P0V3 963 aa5.03□□□□□ -1.6
HDAC3-206ENST00000471968 IFNKQ9P0W0 207 aa5.03□□□□□ -1.6
HDAC3-206ENST00000471968 APLNQ9ULZ1 77 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms