RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 U3KQV3 271 aa15.03■□□□□ -0
LSM5-204ENST00000409909 TIMM8AO60220 97 aaPredicted RBP15.02■□□□□ -0
LSM5-204ENST00000409909 GSTM3P21266 225 aa15.02■□□□□ -0
LSM5-204ENST00000409909 GGT2P36268 569 aa15.02■□□□□ -0
LSM5-204ENST00000409909 ERFP50548 548 aa15.02■□□□□ -0
LSM5-204ENST00000409909 CDK5R2Q13319 367 aa15.02■□□□□ -0
LSM5-204ENST00000409909 MICAQ29983 383 aa15.02■□□□□ -0
LSM5-204ENST00000409909 FAM98BQ52LJ0 330 aaKnown RBP15.02■□□□□ -0
LSM5-204ENST00000409909 OR2T5Q6IEZ7 315 aa15.02■□□□□ -0
LSM5-204ENST00000409909 Q6ZR03 302 aa15.02■□□□□ -0
LSM5-204ENST00000409909 RASSF6Q6ZTQ3 369 aa15.02■□□□□ -0
LSM5-204ENST00000409909 LINC00346Q8IVM7 164 aa15.02■□□□□ -0
LSM5-204ENST00000409909 CYB561A3Q8NBI2 242 aa15.02■□□□□ -0
LSM5-204ENST00000409909 AQP11Q8NBQ7 271 aa15.02■□□□□ -0
LSM5-204ENST00000409909 OR2T29Q8NH02 315 aa15.02■□□□□ -0
LSM5-204ENST00000409909 ZNRF4Q8WWF5 429 aa15.02■□□□□ -0
LSM5-204ENST00000409909 HAVCR1Q96D42 359 aa15.02■□□□□ -0
LSM5-204ENST00000409909 MRPL22Q9NWU5 206 aaKnown RBP15.02■□□□□ -0
LSM5-204ENST00000409909 CGGBP1Q9UFW8 167 aaPredicted RBP15.02■□□□□ -0
LSM5-204ENST00000409909 ZDHHC8Q9ULC8 765 aa15.02■□□□□ -0
LSM5-204ENST00000409909 B4DSR2 109 aa15.01□□□□□ -0.01
LSM5-204ENST00000409909 UBOX5O94941 541 aa15.01□□□□□ -0.01
LSM5-204ENST00000409909 CD55P08174 381 aa15.01□□□□□ -0.01
LSM5-204ENST00000409909 SRD5A1P18405 259 aa15.01□□□□□ -0.01
LSM5-204ENST00000409909 KITLGP21583 273 aa15.01□□□□□ -0.01
LSM5-204ENST00000409909 RBMXP38159 391 aaKnown RBP15.01□□□□□ -0.01
LSM5-204ENST00000409909 DVL1P1P54792 670 aaPredicted RBP15.01□□□□□ -0.01
LSM5-204ENST00000409909 HLXQ14774 488 aaPredicted RBP15.01□□□□□ -0.01
LSM5-204ENST00000409909 HFEQ30201 348 aa15.01□□□□□ -0.01
LSM5-204ENST00000409909 KRTAP27-1Q3LI81 207 aa15.01□□□□□ -0.01
LSM5-204ENST00000409909 SLC18B1Q6NT16 456 aa15.01□□□□□ -0.01
LSM5-204ENST00000409909 RPL13AP3Q6NVV1 102 aa15.01□□□□□ -0.01
LSM5-204ENST00000409909 CFAP77Q6ZQR2 320 aa15.01□□□□□ -0.01
LSM5-204ENST00000409909 CXXC5Q7LFL8 322 aaKnown RBP15.01□□□□□ -0.01
LSM5-204ENST00000409909 OR52L1Q8NGH7 329 aa15.01□□□□□ -0.01
LSM5-204ENST00000409909 CCL17Q92583 94 aa15.01□□□□□ -0.01
LSM5-204ENST00000409909 PTP4A1Q93096 173 aa15.01□□□□□ -0.01
LSM5-204ENST00000409909 ELMOD3Q96FG2 381 aa15.01□□□□□ -0.01
LSM5-204ENST00000409909 DCLRE1CQ96SD1 692 aaKnown RBP15.01□□□□□ -0.01
LSM5-204ENST00000409909 COQ7Q99807 217 aa15.01□□□□□ -0.01
LSM5-204ENST00000409909 THTPAQ9BU02 230 aa15.01□□□□□ -0.01
LSM5-204ENST00000409909 HDHD2Q9H0R4 259 aa15.01□□□□□ -0.01
LSM5-204ENST00000409909 CYB5R1Q9UHQ9 305 aa15.01□□□□□ -0.01
LSM5-204ENST00000409909 TMEFF2Q9UIK5 374 aaPredicted RBP15.01□□□□□ -0.01
LSM5-204ENST00000409909 SAMHD1Q9Y3Z3 626 aaKnown RBP15.01□□□□□ -0.01
LSM5-204ENST00000409909 WIPI2Q9Y4P8 454 aa15.01□□□□□ -0.01
LSM5-204ENST00000409909 RAP2AP10114 183 aa15□□□□□ -0.01
LSM5-204ENST00000409909 PYCR1P32322 319 aa15□□□□□ -0.01
LSM5-204ENST00000409909 TRPM8Q7Z2W7 1104 aa15□□□□□ -0.01
LSM5-204ENST00000409909 ADGRG5Q8IZF4 528 aa15□□□□□ -0.01
LSM5-204ENST00000409909 COG8Q96MW5 612 aa15□□□□□ -0.01
LSM5-204ENST00000409909 DIRC2Q96SL1 478 aa15□□□□□ -0.01
LSM5-204ENST00000409909 DGCR6LQ9BY27 220 aa15□□□□□ -0.01
LSM5-204ENST00000409909 EGLN1Q9GZT9 426 aa15□□□□□ -0.01
LSM5-204ENST00000409909 REEP1Q9H902 201 aa15□□□□□ -0.01
LSM5-204ENST00000409909 LPAR2Q9HBW0 351 aa15□□□□□ -0.01
LSM5-204ENST00000409909 PNRC2Q9NPJ4 139 aaKnown RBP15□□□□□ -0.01
LSM5-204ENST00000409909 PTTG3PQ9NZH4 202 aa15□□□□□ -0.01
LSM5-204ENST00000409909 TANC2Q9HCD6 1990 aa14.99□□□□□ -0.01
LSM5-204ENST00000409909 CLDN25C9JDP6 229 aa14.99□□□□□ -0.01
LSM5-204ENST00000409909 J3QW42 95 aa14.99□□□□□ -0.01
LSM5-204ENST00000409909 SOX14O95416 240 aa14.99□□□□□ -0.01
LSM5-204ENST00000409909 HLA-DQA2P01906 255 aa14.99□□□□□ -0.01
LSM5-204ENST00000409909 RAC2P15153 192 aa14.99□□□□□ -0.01
LSM5-204ENST00000409909 HNF1AP20823 631 aa14.99□□□□□ -0.01
LSM5-204ENST00000409909 RGS6P49758 472 aa14.99□□□□□ -0.01
LSM5-204ENST00000409909 TNFAIP6P98066 277 aaPredicted RBP14.99□□□□□ -0.01
LSM5-204ENST00000409909 TRAP1Q12931 704 aaKnown RBP14.99□□□□□ -0.01
LSM5-204ENST00000409909 SLC36A3Q495N2 470 aa14.99□□□□□ -0.01
LSM5-204ENST00000409909 ZMAT1Q5H9K5 638 aa14.99□□□□□ -0.01
LSM5-204ENST00000409909 LYPD4Q6UWN0 246 aa14.99□□□□□ -0.01
LSM5-204ENST00000409909 FBXW12Q6X9E4 464 aa14.99□□□□□ -0.01
LSM5-204ENST00000409909 COLCA1Q6ZS62 124 aa14.99□□□□□ -0.01
LSM5-204ENST00000409909 LNX2Q8N448 690 aa14.99□□□□□ -0.01
LSM5-204ENST00000409909 SLC37A3Q8NCC5 494 aa14.99□□□□□ -0.01
LSM5-204ENST00000409909 OR2Z1Q8NG97 314 aa14.99□□□□□ -0.01
LSM5-204ENST00000409909 OR4Q3Q8NH05 313 aa14.99□□□□□ -0.01
LSM5-204ENST00000409909 BCAS4Q8TDM0 211 aa14.99□□□□□ -0.01
LSM5-204ENST00000409909 POP5Q969H6 163 aaKnown RBP14.99□□□□□ -0.01
LSM5-204ENST00000409909 MAP6Q96JE9 813 aa14.99□□□□□ -0.01
LSM5-204ENST00000409909 LRGUKQ96M69 825 aa14.99□□□□□ -0.01
LSM5-204ENST00000409909 PITX2Q99697 317 aa14.99□□□□□ -0.01
LSM5-204ENST00000409909 CHID1Q9BWS9 393 aa14.99□□□□□ -0.01
LSM5-204ENST00000409909 CDADC1Q9BWV3 514 aa14.99□□□□□ -0.01
LSM5-204ENST00000409909 TSSK6Q9BXA6 273 aa14.99□□□□□ -0.01
LSM5-204ENST00000409909 ZNF665Q9H7R5 613 aa14.99□□□□□ -0.01
LSM5-204ENST00000409909 TBC1D23Q9NUY8 699 aa14.99□□□□□ -0.01
LSM5-204ENST00000409909 DCAF16Q9NXF7 216 aa14.99□□□□□ -0.01
LSM5-204ENST00000409909 DYSFO75923 2080 aa14.98□□□□□ -0.01
LSM5-204ENST00000409909 PHF1O43189 567 aaPredicted RBP14.98□□□□□ -0.01
LSM5-204ENST00000409909 DEAF1O75398 565 aaPredicted RBP14.98□□□□□ -0.01
LSM5-204ENST00000409909 MSMBP08118 114 aa14.98□□□□□ -0.01
LSM5-204ENST00000409909 ACSM4P0C7M7 580 aa14.98□□□□□ -0.01
LSM5-204ENST00000409909 PSKH1P11801 424 aa14.98□□□□□ -0.01
LSM5-204ENST00000409909 THBS2P35442 1172 aa14.98□□□□□ -0.01
LSM5-204ENST00000409909 RPS27P42677 84 aaKnown RBP14.98□□□□□ -0.01
LSM5-204ENST00000409909 NAA40Q86UY6 237 aa14.98□□□□□ -0.01
LSM5-204ENST00000409909 GLCCI1Q86VQ1 547 aa14.98□□□□□ -0.01
LSM5-204ENST00000409909 PROKR2Q8NFJ6 384 aa14.98□□□□□ -0.01
LSM5-204ENST00000409909 OR51L1Q8NGJ5 315 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms