RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 PRAF2O60831 178 aa9.31□□□□□ -0.92
POLR2J3-201ENST00000379340 WNT11O96014 354 aa9.31□□□□□ -0.92
POLR2J3-201ENST00000379340 P04436 131 aa9.31□□□□□ -0.92
POLR2J3-201ENST00000379340 CDK2P24941 298 aa9.31□□□□□ -0.92
POLR2J3-201ENST00000379340 SRD5A2P31213 254 aa9.31□□□□□ -0.92
POLR2J3-201ENST00000379340 SFTPDP35247 375 aa9.31□□□□□ -0.92
POLR2J3-201ENST00000379340 RAC1P63000 192 aa9.31□□□□□ -0.92
POLR2J3-201ENST00000379340 SSBP1Q04837 148 aaKnown RBP9.31□□□□□ -0.92
POLR2J3-201ENST00000379340 CAMK2DQ13557 499 aa9.31□□□□□ -0.92
POLR2J3-201ENST00000379340 RAET1LQ5VY80 246 aa9.31□□□□□ -0.92
POLR2J3-201ENST00000379340 H3F3CQ6NXT2 135 aa9.31□□□□□ -0.92
POLR2J3-201ENST00000379340 LRFN4Q6PJG9 635 aa9.31□□□□□ -0.92
POLR2J3-201ENST00000379340 NCCRP1Q6ZVX7 275 aaPredicted RBP9.31□□□□□ -0.92
POLR2J3-201ENST00000379340 RAB11FIP2Q7L804 512 aa9.31□□□□□ -0.92
POLR2J3-201ENST00000379340 GPAT4Q86UL3 456 aa9.31□□□□□ -0.92
POLR2J3-201ENST00000379340 NOXA1Q86UR1 476 aa9.31□□□□□ -0.92
POLR2J3-201ENST00000379340 WDFY1Q8IWB7 410 aa9.31□□□□□ -0.92
POLR2J3-201ENST00000379340 IZUMO1Q8IYV9 350 aa9.31□□□□□ -0.92
POLR2J3-201ENST00000379340 ELMOD2Q8IZ81 293 aa9.31□□□□□ -0.92
POLR2J3-201ENST00000379340 DNAAF1Q8NEP3 725 aa9.31□□□□□ -0.92
POLR2J3-201ENST00000379340 OR5M1Q8NGP8 315 aa9.31□□□□□ -0.92
POLR2J3-201ENST00000379340 OR52I2Q8NH67 350 aa9.31□□□□□ -0.92
POLR2J3-201ENST00000379340 OR56B4Q8NH76 319 aa9.31□□□□□ -0.92
POLR2J3-201ENST00000379340 CT55Q8WUE5 264 aa9.31□□□□□ -0.92
POLR2J3-201ENST00000379340 KCNE4Q8WWG9 221 aa9.31□□□□□ -0.92
POLR2J3-201ENST00000379340 RELTQ969Z4 430 aa9.31□□□□□ -0.92
POLR2J3-201ENST00000379340 PHF21AQ96BD5 680 aa9.31□□□□□ -0.92
POLR2J3-201ENST00000379340 INTS12Q96CB8 462 aaKnown RBP9.31□□□□□ -0.92
POLR2J3-201ENST00000379340 EMC6Q9BV81 110 aa9.31□□□□□ -0.92
POLR2J3-201ENST00000379340 AUNIPQ9H7T9 357 aa9.31□□□□□ -0.92
POLR2J3-201ENST00000379340 PROK2Q9HC23 129 aa9.31□□□□□ -0.92
POLR2J3-201ENST00000379340 FAM206AQ9NX38 181 aa9.31□□□□□ -0.92
POLR2J3-201ENST00000379340 TAS2R8Q9NYW2 309 aa9.31□□□□□ -0.92
POLR2J3-201ENST00000379340 FARSAQ9Y285 508 aaKnown RBP9.31□□□□□ -0.92
POLR2J3-201ENST00000379340 POLR1DQ9Y2S0 133 aa9.31□□□□□ -0.92
POLR2J3-201ENST00000379340 MYO18BQ8IUG5 2567 aa9.3□□□□□ -0.92
POLR2J3-201ENST00000379340 A0A0A6YYH2 397 aa9.3□□□□□ -0.92
POLR2J3-201ENST00000379340 ANKRD20A5PA0PJZ0 165 aa9.3□□□□□ -0.92
POLR2J3-201ENST00000379340 OR2M5A3KFT3 312 aa9.3□□□□□ -0.92
POLR2J3-201ENST00000379340 A6NJ64 397 aa9.3□□□□□ -0.92
POLR2J3-201ENST00000379340 RGS13O14921 159 aa9.3□□□□□ -0.92
POLR2J3-201ENST00000379340 ATP6V1G1O75348 118 aa9.3□□□□□ -0.92
POLR2J3-201ENST00000379340 SERPINA7P05543 415 aa9.3□□□□□ -0.92
POLR2J3-201ENST00000379340 H2AFB2P0C5Z0 115 aa9.3□□□□□ -0.92
POLR2J3-201ENST00000379340 JMJD7P0C870 316 aa9.3□□□□□ -0.92
POLR2J3-201ENST00000379340 PLA2G2AP14555 144 aa9.3□□□□□ -0.92
POLR2J3-201ENST00000379340 TCN2P20062 427 aa9.3□□□□□ -0.92
POLR2J3-201ENST00000379340 GIFP27352 417 aa9.3□□□□□ -0.92
POLR2J3-201ENST00000379340 HTR2CP28335 458 aa9.3□□□□□ -0.92
POLR2J3-201ENST00000379340 ERP29P30040 261 aaKnown RBP9.3□□□□□ -0.92
POLR2J3-201ENST00000379340 FAUP35544 74 aaKnown RBP9.3□□□□□ -0.92
POLR2J3-201ENST00000379340 POU3F4P49335 361 aa9.3□□□□□ -0.92
POLR2J3-201ENST00000379340 ZNF133P52736 654 aaPredicted RBP9.3□□□□□ -0.92
POLR2J3-201ENST00000379340 PSMA6P60900 246 aaKnown RBP9.3□□□□□ -0.92
POLR2J3-201ENST00000379340 RPS15P62841 145 aaKnown RBP9.3□□□□□ -0.92
POLR2J3-201ENST00000379340 MRPS15P82914 257 aaKnown RBP9.3□□□□□ -0.92
POLR2J3-201ENST00000379340 H3F3AP84243 136 aa9.3□□□□□ -0.92
POLR2J3-201ENST00000379340 C19orf57Q0VDD7 668 aa9.3□□□□□ -0.92
POLR2J3-201ENST00000379340 EIF3IQ13347 325 aaKnown RBP9.3□□□□□ -0.92
POLR2J3-201ENST00000379340 MAB21L1Q13394 359 aa9.3□□□□□ -0.92
POLR2J3-201ENST00000379340 RNASE12Q5GAN4 147 aaKnown RBP9.3□□□□□ -0.92
POLR2J3-201ENST00000379340 C10orf128Q5T292 105 aa9.3□□□□□ -0.92
POLR2J3-201ENST00000379340 OTPQ5XKR4 325 aa9.3□□□□□ -0.92
POLR2J3-201ENST00000379340 CD276Q5ZPR3 534 aa9.3□□□□□ -0.92
POLR2J3-201ENST00000379340 PRSS45Q7RTY3 260 aa9.3□□□□□ -0.92
POLR2J3-201ENST00000379340 MDGA2Q7Z553 956 aa9.3□□□□□ -0.92
POLR2J3-201ENST00000379340 PTX4Q96A99 478 aa9.3□□□□□ -0.92
POLR2J3-201ENST00000379340 PNPLA2Q96AD5 504 aa9.3□□□□□ -0.92
POLR2J3-201ENST00000379340 FAM3DQ96BQ1 224 aa9.3□□□□□ -0.92
POLR2J3-201ENST00000379340 MED28Q9H204 178 aa9.3□□□□□ -0.92
POLR2J3-201ENST00000379340 RANGRFQ9HD47 186 aaPredicted RBP9.3□□□□□ -0.92
POLR2J3-201ENST00000379340 HRASLSQ9HDD0 168 aa9.3□□□□□ -0.92
POLR2J3-201ENST00000379340 CENPMQ9NSP4 180 aa9.3□□□□□ -0.92
POLR2J3-201ENST00000379340 NUDT15Q9NV35 164 aa9.3□□□□□ -0.92
POLR2J3-201ENST00000379340 TAS2R4Q9NYW5 299 aa9.3□□□□□ -0.92
POLR2J3-201ENST00000379340 GDF2Q9UK05 429 aaPredicted RBP9.3□□□□□ -0.92
POLR2J3-201ENST00000379340 FBXL3Q9UKT7 428 aa9.3□□□□□ -0.92
POLR2J3-201ENST00000379340 MRPS18CQ9Y3D5 142 aaKnown RBP9.3□□□□□ -0.92
POLR2J3-201ENST00000379340 LOC390937A0A1W2PQ73 354 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 GGT3PA6NGU5 568 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 SULT1C2O00338 296 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 ZIC3O60481 467 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 CTAG2O75638 210 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 C1QBP02746 253 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 CSF1P09603 554 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 TCEA1P23193 301 aaKnown RBP9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 STOMP27105 288 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 HSD11B1P28845 292 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 OTX2P32243 289 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 GUCA1AP43080 201 aaPredicted RBP9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 LSM6P62312 80 aaKnown RBP9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 GRB2P62993 217 aaKnown RBP9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 GABREP78334 506 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 CD83Q01151 205 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 NDUFA5Q16718 116 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 C1orf100Q5SVJ3 147 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 CDCP2Q5VXM1 449 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 ASPHD2Q6ICH7 369 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 JMJD6Q6NYC1 403 aaPredicted RBP9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 FOXL2NBQ6ZUU3 175 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms