RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 DNAH3Q8TD57 4116 aa13.2□□□□□ -0.3
DDX55-202ENST00000354291 IFNW1P05000 195 aa13.2□□□□□ -0.3
DDX55-202ENST00000354291 MMP7P09237 267 aaPredicted RBP13.2□□□□□ -0.3
DDX55-202ENST00000354291 COX4I1P13073 169 aa13.2□□□□□ -0.3
DDX55-202ENST00000354291 IFI30P13284 250 aa13.2□□□□□ -0.3
DDX55-202ENST00000354291 GUCA1AP43080 201 aaPredicted RBP13.2□□□□□ -0.3
DDX55-202ENST00000354291 GDI2P50395 445 aaKnown RBP13.2□□□□□ -0.3
DDX55-202ENST00000354291 PPP1CBP62140 327 aa13.2□□□□□ -0.3
DDX55-202ENST00000354291 CD47Q08722 323 aa13.2□□□□□ -0.3
DDX55-202ENST00000354291 OXLD1Q5BKU9 147 aa13.2□□□□□ -0.3
DDX55-202ENST00000354291 SLC15A3Q8IY34 581 aa13.2□□□□□ -0.3
DDX55-202ENST00000354291 RNF113BQ8IZP6 322 aaKnown RBP13.2□□□□□ -0.3
DDX55-202ENST00000354291 ITLN1Q8WWA0 313 aa13.2□□□□□ -0.3
DDX55-202ENST00000354291 PPP1R14AQ96A00 147 aa13.2□□□□□ -0.3
DDX55-202ENST00000354291 RBP7Q96R05 134 aa13.2□□□□□ -0.3
DDX55-202ENST00000354291 ALG12Q9BV10 488 aa13.2□□□□□ -0.3
DDX55-202ENST00000354291 CCNB1IP1Q9NPC3 277 aa13.2□□□□□ -0.3
DDX55-202ENST00000354291 MED4Q9NPJ6 270 aa13.2□□□□□ -0.3
DDX55-202ENST00000354291 CGGBP1Q9UFW8 167 aaPredicted RBP13.2□□□□□ -0.3
DDX55-202ENST00000354291 MIOXQ9UGB7 285 aa13.2□□□□□ -0.3
DDX55-202ENST00000354291 LOC100509620A0A075B734 347 aa13.19□□□□□ -0.3
DDX55-202ENST00000354291 TMEM178BH3BS89 294 aa13.19□□□□□ -0.3
DDX55-202ENST00000354291 CXCR6O00574 342 aa13.19□□□□□ -0.3
DDX55-202ENST00000354291 NDUFAB1O14561 156 aa13.19□□□□□ -0.3
DDX55-202ENST00000354291 TNFRSF13BO14836 293 aaPredicted RBP13.19□□□□□ -0.3
DDX55-202ENST00000354291 GSTA4O15217 222 aa13.19□□□□□ -0.3
DDX55-202ENST00000354291 SLC2A10O95528 541 aa13.19□□□□□ -0.3
DDX55-202ENST00000354291 MDH1P40925 334 aaKnown RBP13.19□□□□□ -0.3
DDX55-202ENST00000354291 RPL27P61353 136 aaKnown RBP13.19□□□□□ -0.3
DDX55-202ENST00000354291 LIPEQ05469 1076 aa13.19□□□□□ -0.3
DDX55-202ENST00000354291 EGR3Q06889 387 aa13.19□□□□□ -0.3
DDX55-202ENST00000354291 TRAM2Q15035 370 aa13.19□□□□□ -0.3
DDX55-202ENST00000354291 C11orf87Q6NUJ2 197 aa13.19□□□□□ -0.3
DDX55-202ENST00000354291 RFPL4BQ6ZWI9 263 aa13.19□□□□□ -0.3
DDX55-202ENST00000354291 FKBP9P1Q75LS8 142 aa13.19□□□□□ -0.3
DDX55-202ENST00000354291 OFCC1Q8IZS5 231 aa13.19□□□□□ -0.3
DDX55-202ENST00000354291 FITM2Q8N6M3 262 aa13.19□□□□□ -0.3
DDX55-202ENST00000354291 AKR7LQ8NHP1 331 aa13.19□□□□□ -0.3
DDX55-202ENST00000354291 HDAC2Q92769 488 aaKnown RBP13.19□□□□□ -0.3
DDX55-202ENST00000354291 DACT3Q96B18 629 aaPredicted RBP13.19□□□□□ -0.3
DDX55-202ENST00000354291 NMD3Q96D46 503 aaKnown RBP13.19□□□□□ -0.3
DDX55-202ENST00000354291 POM121L2Q96KW2 1035 aa13.19□□□□□ -0.3
DDX55-202ENST00000354291 EFCAB1Q9HAE3 211 aa13.19□□□□□ -0.3
DDX55-202ENST00000354291 TMEM165Q9HC07 324 aa13.19□□□□□ -0.3
DDX55-202ENST00000354291 NECAP2Q9NVZ3 263 aa13.19□□□□□ -0.3
DDX55-202ENST00000354291 AURKAIP1Q9NWT8 199 aaPredicted RBP13.19□□□□□ -0.3
DDX55-202ENST00000354291 KIF17Q9P2E2 1029 aa13.19□□□□□ -0.3
DDX55-202ENST00000354291 TANC2Q9HCD6 1990 aa13.19□□□□□ -0.3
DDX55-202ENST00000354291 ZNF816-ZNF321PA0A0X1KG74 233 aa13.18□□□□□ -0.3
DDX55-202ENST00000354291 ZNF682O95780 498 aa13.18□□□□□ -0.3
DDX55-202ENST00000354291 SFTPBP07988 381 aa13.18□□□□□ -0.3
DDX55-202ENST00000354291 CDAP32320 146 aa13.18□□□□□ -0.3
DDX55-202ENST00000354291 YAP1P46937 504 aaKnown RBP13.18□□□□□ -0.3
DDX55-202ENST00000354291 CTXN1P60606 82 aa13.18□□□□□ -0.3
DDX55-202ENST00000354291 PRKCDQ05655 676 aa13.18□□□□□ -0.3
DDX55-202ENST00000354291 PSG7Q13046 419 aa13.18□□□□□ -0.3
DDX55-202ENST00000354291 TOP3AQ13472 1001 aaPredicted RBP13.18□□□□□ -0.3
DDX55-202ENST00000354291 SGCAQ16586 387 aa13.18□□□□□ -0.3
DDX55-202ENST00000354291 IFI44LQ53G44 452 aa13.18□□□□□ -0.3
DDX55-202ENST00000354291 FAM27BQ5VT28 67 aa13.18□□□□□ -0.3
DDX55-202ENST00000354291 CBLL1Q75N03 491 aa13.18□□□□□ -0.3
DDX55-202ENST00000354291 VTCN1Q7Z7D3 282 aa13.18□□□□□ -0.3
DDX55-202ENST00000354291 OAFQ86UD1 273 aa13.18□□□□□ -0.3
DDX55-202ENST00000354291 NRMQ8IXM6 262 aa13.18□□□□□ -0.3
DDX55-202ENST00000354291 GATAD2BQ8WXI9 593 aa13.18□□□□□ -0.3
DDX55-202ENST00000354291 NSMAFQ92636 917 aa13.18□□□□□ -0.3
DDX55-202ENST00000354291 NEIL1Q96FI4 390 aaPredicted RBP13.18□□□□□ -0.3
DDX55-202ENST00000354291 C16orf95Q9H693 158 aa13.18□□□□□ -0.3
DDX55-202ENST00000354291 RHCGQ9UBD6 479 aa13.18□□□□□ -0.3
DDX55-202ENST00000354291 UGT2A1Q9Y4X1 527 aa13.18□□□□□ -0.3
DDX55-202ENST00000354291 SNX13Q9Y5W8 968 aa13.18□□□□□ -0.3
DDX55-202ENST00000354291 TET2Q6N021 2002 aaPredicted RBP13.18□□□□□ -0.3
DDX55-202ENST00000354291 A6NIZ1 184 aa13.17□□□□□ -0.3
DDX55-202ENST00000354291 ZNF32P17041 273 aa13.17□□□□□ -0.3
DDX55-202ENST00000354291 CPT2P23786 658 aa13.17□□□□□ -0.3
DDX55-202ENST00000354291 IER3P46695 156 aa13.17□□□□□ -0.3
DDX55-202ENST00000354291 SLC9A3P48764 834 aa13.17□□□□□ -0.3
DDX55-202ENST00000354291 SLC7A2P52569 658 aa13.17□□□□□ -0.3
DDX55-202ENST00000354291 RAP1BP61224 184 aa13.17□□□□□ -0.3
DDX55-202ENST00000354291 RAP1AP62834 184 aa13.17□□□□□ -0.3
DDX55-202ENST00000354291 FMODQ06828 376 aa13.17□□□□□ -0.3
DDX55-202ENST00000354291 SLC25A47Q6Q0C1 308 aa13.17□□□□□ -0.3
DDX55-202ENST00000354291 HACD2Q6Y1H2 254 aa13.17□□□□□ -0.3
DDX55-202ENST00000354291 ZNF730Q6ZMV8 503 aa13.17□□□□□ -0.3
DDX55-202ENST00000354291 GDPGP1Q6ZNW5 385 aa13.17□□□□□ -0.3
DDX55-202ENST00000354291 Q6ZTK2 550 aa13.17□□□□□ -0.3
DDX55-202ENST00000354291 RRM2BQ7LG56 351 aa13.17□□□□□ -0.3
DDX55-202ENST00000354291 ZER1Q7Z7L7 766 aa13.17□□□□□ -0.3
DDX55-202ENST00000354291 ALDH16A1Q8IZ83 802 aa13.17□□□□□ -0.3
DDX55-202ENST00000354291 OR8B3Q8NGG8 313 aa13.17□□□□□ -0.3
DDX55-202ENST00000354291 OR51A7Q8NH64 312 aa13.17□□□□□ -0.3
DDX55-202ENST00000354291 ACOT11Q8WXI4 607 aaPredicted RBP13.17□□□□□ -0.3
DDX55-202ENST00000354291 NABP1Q96AH0 204 aa13.17□□□□□ -0.3
DDX55-202ENST00000354291 OR2V2Q96R30 315 aa13.17□□□□□ -0.3
DDX55-202ENST00000354291 OR8B2Q96RD0 313 aa13.17□□□□□ -0.3
DDX55-202ENST00000354291 CDADC1Q9BWV3 514 aa13.17□□□□□ -0.3
DDX55-202ENST00000354291 MAN2C1Q9NTJ4 1040 aa13.17□□□□□ -0.3
DDX55-202ENST00000354291 ACOXLQ9NUZ1 547 aa13.17□□□□□ -0.3
DDX55-202ENST00000354291 IL19Q9UHD0 177 aa13.17□□□□□ -0.3
DDX55-202ENST00000354291 TRAV27A0A087WT01 109 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms