RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 SDHAP31040 664 aa12.05□□□□□ -0.48
COL1A1-201ENST00000225964 HLA-BQ31612 363 aa12.05□□□□□ -0.48
COL1A1-201ENST00000225964 DEFB124Q8NES8 71 aa12.05□□□□□ -0.48
COL1A1-201ENST00000225964 OR5B3Q8NH48 314 aa12.05□□□□□ -0.48
COL1A1-201ENST00000225964 NAA50Q9GZZ1 169 aaKnown RBP12.05□□□□□ -0.48
COL1A1-201ENST00000225964 IGLV3-10A0A075B6K4 115 aa12.05□□□□□ -0.48
COL1A1-201ENST00000225964 HIST1H1CP16403 213 aaKnown RBP12.05□□□□□ -0.48
COL1A1-201ENST00000225964 MMP11P24347 488 aa12.05□□□□□ -0.48
COL1A1-201ENST00000225964 CAPZBP47756 277 aa12.05□□□□□ -0.48
COL1A1-201ENST00000225964 C17orf107Q6ZR85 190 aa12.05□□□□□ -0.48
COL1A1-201ENST00000225964 PCNPQ8WW12 178 aaKnown RBP12.05□□□□□ -0.48
COL1A1-201ENST00000225964 TVP23CQ96ET8 276 aa12.05□□□□□ -0.48
COL1A1-201ENST00000225964 C20orf27Q9GZN8 174 aa12.05□□□□□ -0.48
COL1A1-201ENST00000225964 CHST6Q9GZX3 395 aa12.05□□□□□ -0.48
COL1A1-201ENST00000225964 XRCC2O43543 280 aa12.05□□□□□ -0.48
COL1A1-201ENST00000225964 TSPAN12O95859 305 aa12.05□□□□□ -0.48
COL1A1-201ENST00000225964 HMGA1P17096 107 aaKnown RBP12.05□□□□□ -0.48
COL1A1-201ENST00000225964 GFERP55789 205 aa12.05□□□□□ -0.48
COL1A1-201ENST00000225964 TAAR6Q96RI8 345 aa12.05□□□□□ -0.48
COL1A1-201ENST00000225964 C19orf53Q9UNZ5 99 aaPredicted RBP12.05□□□□□ -0.48
COL1A1-201ENST00000225964 CCDC187A0A096LP49 1063 aa12.05□□□□□ -0.48
COL1A1-201ENST00000225964 A0A1W2PPC4 97 aa12.05□□□□□ -0.48
COL1A1-201ENST00000225964 FITM1A5D6W6 292 aa12.05□□□□□ -0.48
COL1A1-201ENST00000225964 ALOX5APP20292 161 aa12.05□□□□□ -0.48
COL1A1-201ENST00000225964 BTN1A1Q13410 526 aa12.05□□□□□ -0.48
COL1A1-201ENST00000225964 TMEM200AQ86VY9 491 aa12.05□□□□□ -0.48
COL1A1-201ENST00000225964 OR51S1Q8NGJ8 323 aa12.05□□□□□ -0.48
COL1A1-201ENST00000225964 SEC22CQ9BRL7 303 aa12.05□□□□□ -0.48
COL1A1-201ENST00000225964 TCEAL7Q9BRU2 100 aa12.05□□□□□ -0.48
COL1A1-201ENST00000225964 MOB1AQ9H8S9 216 aa12.05□□□□□ -0.48
COL1A1-201ENST00000225964 CLCF1Q9UBD9 225 aa12.05□□□□□ -0.48
COL1A1-201ENST00000225964 HMGN4O00479 90 aa12.05□□□□□ -0.48
COL1A1-201ENST00000225964 SIX6O95475 246 aa12.05□□□□□ -0.48
COL1A1-201ENST00000225964 MLF1P58340 268 aa12.05□□□□□ -0.48
COL1A1-201ENST00000225964 Q6ZSR9 355 aa12.05□□□□□ -0.48
COL1A1-201ENST00000225964 AKR1E2Q96JD6 320 aa12.05□□□□□ -0.48
COL1A1-201ENST00000225964 DUSP22Q9NRW4 184 aa12.05□□□□□ -0.48
COL1A1-201ENST00000225964 FZR1Q9UM11 496 aa12.05□□□□□ -0.48
COL1A1-201ENST00000225964 KLK4Q9Y5K2 254 aa12.05□□□□□ -0.48
COL1A1-201ENST00000225964 CYTIPO60759 359 aa12.04□□□□□ -0.48
COL1A1-201ENST00000225964 SLC2A10O95528 541 aa12.04□□□□□ -0.48
COL1A1-201ENST00000225964 EXOSC2Q13868 293 aaKnown RBP12.04□□□□□ -0.48
COL1A1-201ENST00000225964 ACKR1Q16570 336 aa12.04□□□□□ -0.48
COL1A1-201ENST00000225964 C20orf24Q9BUV8 137 aa12.04□□□□□ -0.48
COL1A1-201ENST00000225964 SLC35D1Q9NTN3 355 aa12.04□□□□□ -0.48
COL1A1-201ENST00000225964 CACNA1SQ13698 1873 aa12.04□□□□□ -0.48
COL1A1-201ENST00000225964 OR2J3O76001 311 aa12.04□□□□□ -0.48
COL1A1-201ENST00000225964 TCRBP04435 133 aa12.04□□□□□ -0.48
COL1A1-201ENST00000225964 CLEC2LP0C7M8 214 aa12.04□□□□□ -0.48
COL1A1-201ENST00000225964 FCER1GP30273 86 aa12.04□□□□□ -0.48
COL1A1-201ENST00000225964 POLR2IP36954 125 aaKnown RBP12.04□□□□□ -0.48
COL1A1-201ENST00000225964 SLC19A1P41440 591 aa12.04□□□□□ -0.48
COL1A1-201ENST00000225964 RFX2P48378 723 aa12.04□□□□□ -0.48
COL1A1-201ENST00000225964 LRRC10Q5BKY1 277 aa12.04□□□□□ -0.48
COL1A1-201ENST00000225964 NLRP8Q86W28 1048 aa12.04□□□□□ -0.48
COL1A1-201ENST00000225964 COMMD5Q9GZQ3 224 aa12.04□□□□□ -0.48
COL1A1-201ENST00000225964 SPACA1Q9HBV2 294 aa12.04□□□□□ -0.48
COL1A1-201ENST00000225964 GPR84Q9NQS5 396 aa12.04□□□□□ -0.48
COL1A1-201ENST00000225964 LIN7CQ9NUP9 197 aaKnown RBP12.04□□□□□ -0.48
COL1A1-201ENST00000225964 B3GALT5Q9Y2C3 310 aa12.04□□□□□ -0.48
COL1A1-201ENST00000225964 ZNF785A8K8V0 405 aa12.04□□□□□ -0.48
COL1A1-201ENST00000225964 SMIM17P0DL12 118 aa12.04□□□□□ -0.48
COL1A1-201ENST00000225964 HAAOP46952 286 aa12.04□□□□□ -0.48
COL1A1-201ENST00000225964 BPIFB3P59826 476 aa12.04□□□□□ -0.48
COL1A1-201ENST00000225964 SOHLH1Q5JUK2 328 aa12.04□□□□□ -0.48
COL1A1-201ENST00000225964 LSRQ86X29 649 aaPredicted RBP12.04□□□□□ -0.48
COL1A1-201ENST00000225964 BTF3L4Q96K17 158 aa12.04□□□□□ -0.48
COL1A1-201ENST00000225964 OR2A14Q96R47 310 aa12.04□□□□□ -0.48
COL1A1-201ENST00000225964 PLA2G3Q9NZ20 509 aa12.04□□□□□ -0.48
COL1A1-201ENST00000225964 WDR1O75083 606 aa12.04□□□□□ -0.48
COL1A1-201ENST00000225964 SOWAHCQ53LP3 525 aaPredicted RBP12.04□□□□□ -0.48
COL1A1-201ENST00000225964 EMC4Q5J8M3 183 aa12.04□□□□□ -0.48
COL1A1-201ENST00000225964 ARSGQ96EG1 525 aa12.04□□□□□ -0.48
COL1A1-201ENST00000225964 SERTM1A2A2V5 107 aa12.04□□□□□ -0.48
COL1A1-201ENST00000225964 GFYI3L273 518 aa12.04□□□□□ -0.48
COL1A1-201ENST00000225964 TAS2R45P59539 299 aa12.04□□□□□ -0.48
COL1A1-201ENST00000225964 OR1C1Q15619 314 aa12.04□□□□□ -0.48
COL1A1-201ENST00000225964 ZNF766Q5HY98 468 aa12.04□□□□□ -0.48
COL1A1-201ENST00000225964 SPRED1Q7Z699 444 aa12.04□□□□□ -0.48
COL1A1-201ENST00000225964 NECAP1Q8NC96 275 aa12.04□□□□□ -0.48
COL1A1-201ENST00000225964 OR1J1Q8NGS3 322 aa12.04□□□□□ -0.48
COL1A1-201ENST00000225964 OR52N1Q8NH53 320 aa12.04□□□□□ -0.48
COL1A1-201ENST00000225964 C1QTNF3Q9BXJ4 246 aa12.04□□□□□ -0.48
COL1A1-201ENST00000225964 B4GALT1P15291 398 aa12.04□□□□□ -0.48
COL1A1-201ENST00000225964 DPTQ07507 201 aa12.04□□□□□ -0.48
COL1A1-201ENST00000225964 FCRL6Q6DN72 434 aa12.04□□□□□ -0.48
COL1A1-201ENST00000225964 CA5BP1Q8WTZ4 195 aa12.04□□□□□ -0.48
COL1A1-201ENST00000225964 SPACA5Q96QH8 159 aa12.04□□□□□ -0.48
COL1A1-201ENST00000225964 S1PR5Q9H228 398 aa12.04□□□□□ -0.48
COL1A1-201ENST00000225964 LTB4R2Q9NPC1 389 aa12.04□□□□□ -0.48
COL1A1-201ENST00000225964 SLC25A6P12236 298 aa12.03□□□□□ -0.48
COL1A1-201ENST00000225964 RSPO2Q6UXX9 243 aaPredicted RBP12.03□□□□□ -0.48
COL1A1-201ENST00000225964 NRARPQ7Z6K4 114 aa12.03□□□□□ -0.48
COL1A1-201ENST00000225964 SLC38A9Q8NBW4 561 aa12.03□□□□□ -0.48
COL1A1-201ENST00000225964 MOB3AQ96BX8 217 aa12.03□□□□□ -0.48
COL1A1-201ENST00000225964 COX7A2P2O60397 106 aa12.03□□□□□ -0.48
COL1A1-201ENST00000225964 NID1P14543 1247 aa12.03□□□□□ -0.48
COL1A1-201ENST00000225964 ZNF816Q0VGE8 651 aaPredicted RBP12.03□□□□□ -0.48
COL1A1-201ENST00000225964 TMEM81Q6P7N7 255 aa12.03□□□□□ -0.48
COL1A1-201ENST00000225964 VASH2Q86V25 355 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms