RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 DBX2Q6ZNG2 339 aa12.11□□□□□ -0.47
NEK3-205ENST00000610828 BTN2A1Q7KYR7 527 aa12.11□□□□□ -0.47
NEK3-205ENST00000610828 OR51A2Q8NGJ7 313 aa12.11□□□□□ -0.47
NEK3-205ENST00000610828 DACT3Q96B18 629 aaPredicted RBP12.11□□□□□ -0.47
NEK3-205ENST00000610828 PHF21AQ96BD5 680 aa12.11□□□□□ -0.47
NEK3-205ENST00000610828 PLSCR3Q9NRY6 295 aa12.11□□□□□ -0.47
NEK3-205ENST00000610828 GDF2Q9UK05 429 aaPredicted RBP12.11□□□□□ -0.47
NEK3-205ENST00000610828 LOC100289279A0A1B0GTE1 492 aa12.11□□□□□ -0.47
NEK3-205ENST00000610828 C7orf66A4D0T2 115 aa12.11□□□□□ -0.47
NEK3-205ENST00000610828 CTAG2O75638 210 aa12.11□□□□□ -0.47
NEK3-205ENST00000610828 IGHEP01854 428 aa12.11□□□□□ -0.47
NEK3-205ENST00000610828 QDPRP09417 244 aa12.11□□□□□ -0.47
NEK3-205ENST00000610828 ZNF883P0CG24 379 aa12.11□□□□□ -0.47
NEK3-205ENST00000610828 IGFBP3P17936 291 aaPredicted RBP12.11□□□□□ -0.47
NEK3-205ENST00000610828 HTR2CP28335 458 aa12.11□□□□□ -0.47
NEK3-205ENST00000610828 MNDAP41218 407 aa12.11□□□□□ -0.47
NEK3-205ENST00000610828 CLDN17P56750 224 aa12.11□□□□□ -0.47
NEK3-205ENST00000610828 GLYATL3Q5SZD4 288 aa12.11□□□□□ -0.47
NEK3-205ENST00000610828 CFAP77Q6ZQR2 320 aa12.11□□□□□ -0.47
NEK3-205ENST00000610828 OR10S1Q8NGN2 331 aa12.11□□□□□ -0.47
NEK3-205ENST00000610828 OR2AJ1Q8NGZ0 328 aa12.11□□□□□ -0.47
NEK3-205ENST00000610828 C20orf85Q9H1P6 137 aa12.11□□□□□ -0.47
NEK3-205ENST00000610828 GHITMQ9H3K2 345 aa12.11□□□□□ -0.47
NEK3-205ENST00000610828 SH2D2AQ9NP31 389 aa12.11□□□□□ -0.47
NEK3-205ENST00000610828 DIABLOQ9NR28 239 aa12.11□□□□□ -0.47
NEK3-205ENST00000610828 FAM206AQ9NX38 181 aa12.11□□□□□ -0.47
NEK3-205ENST00000610828 CGGBP1Q9UFW8 167 aaPredicted RBP12.11□□□□□ -0.47
NEK3-205ENST00000610828 LHFPL6Q9Y693 200 aa12.11□□□□□ -0.47
NEK3-205ENST00000610828 IGHV3-15A0A0B4J1V0 119 aa12.1□□□□□ -0.47
NEK3-205ENST00000610828 ANKRD20A5PA0PJZ0 165 aa12.1□□□□□ -0.47
NEK3-205ENST00000610828 OR2M5A3KFT3 312 aa12.1□□□□□ -0.47
NEK3-205ENST00000610828 GGT3PA6NGU5 568 aa12.1□□□□□ -0.47
NEK3-205ENST00000610828 TTLL8A6PVC2 850 aa12.1□□□□□ -0.47
NEK3-205ENST00000610828 SMLR1H3BR10 107 aa12.1□□□□□ -0.47
NEK3-205ENST00000610828 ZIC3O60481 467 aa12.1□□□□□ -0.47
NEK3-205ENST00000610828 PMS2P2O95744 297 aa12.1□□□□□ -0.47
NEK3-205ENST00000610828 DCTDP32321 178 aa12.1□□□□□ -0.47
NEK3-205ENST00000610828 CDK10Q15131 360 aa12.1□□□□□ -0.47
NEK3-205ENST00000610828 FCN2Q15485 313 aa12.1□□□□□ -0.47
NEK3-205ENST00000610828 FAM166AQ6J272 317 aa12.1□□□□□ -0.47
NEK3-205ENST00000610828 FAAP20Q6NZ36 180 aa12.1□□□□□ -0.47
NEK3-205ENST00000610828 C6orf15Q6UXA7 325 aaPredicted RBP12.1□□□□□ -0.47
NEK3-205ENST00000610828 RAB11FIP2Q7L804 512 aa12.1□□□□□ -0.47
NEK3-205ENST00000610828 TIPARPQ7Z3E1 657 aaKnown RBP12.1□□□□□ -0.47
NEK3-205ENST00000610828 PPP1R32Q7Z5V6 425 aa12.1□□□□□ -0.47
NEK3-205ENST00000610828 LUZP2Q86TE4 346 aa12.1□□□□□ -0.47
NEK3-205ENST00000610828 BEST4Q8NFU0 473 aa12.1□□□□□ -0.47
NEK3-205ENST00000610828 OR56B4Q8NH76 319 aa12.1□□□□□ -0.47
NEK3-205ENST00000610828 GIMAP1Q8WWP7 306 aa12.1□□□□□ -0.47
NEK3-205ENST00000610828 STRADBQ9C0K7 418 aa12.1□□□□□ -0.47
NEK3-205ENST00000610828 BEX1Q9HBH7 125 aa12.1□□□□□ -0.47
NEK3-205ENST00000610828 PHF3Q92576 2039 aaKnown RBP12.1□□□□□ -0.47
NEK3-205ENST00000610828 CNTRLQ7Z7A1 2325 aa12.1□□□□□ -0.47
NEK3-205ENST00000610828 BDP1A6H8Y1 2624 aa12.1□□□□□ -0.47
NEK3-205ENST00000610828 FAM172BPA6NC97 362 aa12.1□□□□□ -0.47
NEK3-205ENST00000610828 KDM4BO94953 1096 aa12.1□□□□□ -0.47
NEK3-205ENST00000610828 CD63P08962 238 aa12.1□□□□□ -0.47
NEK3-205ENST00000610828 ACSM4P0C7M7 580 aa12.1□□□□□ -0.47
NEK3-205ENST00000610828 STOMP27105 288 aa12.1□□□□□ -0.47
NEK3-205ENST00000610828 HSD11B1P28845 292 aa12.1□□□□□ -0.47
NEK3-205ENST00000610828 ZNF239Q16600 458 aaKnown RBP12.1□□□□□ -0.47
NEK3-205ENST00000610828 GSG1Q2KHT4 349 aa12.1□□□□□ -0.47
NEK3-205ENST00000610828 B3GNTL1Q67FW5 361 aaPredicted RBP12.1□□□□□ -0.47
NEK3-205ENST00000610828 SLC25A47Q6Q0C1 308 aa12.1□□□□□ -0.47
NEK3-205ENST00000610828 JAGN1Q8N5M9 183 aa12.1□□□□□ -0.47
NEK3-205ENST00000610828 CT55Q8WUE5 264 aa12.1□□□□□ -0.47
NEK3-205ENST00000610828 ACTR6Q9GZN1 396 aa12.1□□□□□ -0.47
NEK3-205ENST00000610828 PBOV1Q9GZY1 135 aa12.1□□□□□ -0.47
NEK3-205ENST00000610828 OR51J1Q9H342 316 aa12.1□□□□□ -0.47
NEK3-205ENST00000610828 ASH2LQ9UBL3 628 aa12.1□□□□□ -0.47
NEK3-205ENST00000610828 COL27A1Q8IZC6 1860 aaPredicted RBP12.09□□□□□ -0.47
NEK3-205ENST00000610828 GPR179Q6PRD1 2367 aa12.09□□□□□ -0.47
NEK3-205ENST00000610828 NCOR1O75376 2440 aa12.09□□□□□ -0.47
NEK3-205ENST00000610828 TMEM272A0A1B0GTI8 110 aa12.09□□□□□ -0.47
NEK3-205ENST00000610828 NAP1L6A6NFF2 107 aa12.09□□□□□ -0.47
NEK3-205ENST00000610828 TLX3O43711 291 aaPredicted RBP12.09□□□□□ -0.47
NEK3-205ENST00000610828 C1QBP02746 253 aa12.09□□□□□ -0.47
NEK3-205ENST00000610828 TTRP02766 147 aa12.09□□□□□ -0.47
NEK3-205ENST00000610828 JMJD7P0C870 316 aa12.09□□□□□ -0.47
NEK3-205ENST00000610828 H3F3AP84243 136 aa12.09□□□□□ -0.47
NEK3-205ENST00000610828 FAPQ12884 760 aa12.09□□□□□ -0.47
NEK3-205ENST00000610828 BIVMQ86UB2 503 aa12.09□□□□□ -0.47
NEK3-205ENST00000610828 FGGYQ96C11 551 aa12.09□□□□□ -0.47
NEK3-205ENST00000610828 GAL3ST1Q99999 423 aa12.09□□□□□ -0.47
NEK3-205ENST00000610828 TMEM246Q9BRR3 403 aa12.09□□□□□ -0.47
NEK3-205ENST00000610828 ATG5Q9H1Y0 275 aa12.09□□□□□ -0.47
NEK3-205ENST00000610828 FLVCR2Q9UPI3 526 aa12.09□□□□□ -0.47
NEK3-205ENST00000610828 MRPS18BQ9Y676 258 aaKnown RBP12.09□□□□□ -0.47
NEK3-205ENST00000610828 TRAV18A0A075B6X5 111 aa12.08□□□□□ -0.47
NEK3-205ENST00000610828 LOC102725191A0A1B0GVB3 256 aa12.08□□□□□ -0.47
NEK3-205ENST00000610828 ZNF878C9JN71 531 aa12.08□□□□□ -0.47
NEK3-205ENST00000610828 SYT7O43581 403 aa12.08□□□□□ -0.47
NEK3-205ENST00000610828 CBR3O75828 277 aa12.08□□□□□ -0.47
NEK3-205ENST00000610828 ICAM2P13598 275 aa12.08□□□□□ -0.47
NEK3-205ENST00000610828 PSMB1P20618 241 aaKnown RBP12.08□□□□□ -0.47
NEK3-205ENST00000610828 ERP29P30040 261 aaKnown RBP12.08□□□□□ -0.47
NEK3-205ENST00000610828 GNALP38405 381 aa12.08□□□□□ -0.47
NEK3-205ENST00000610828 GZMKP49863 264 aa12.08□□□□□ -0.47
NEK3-205ENST00000610828 GABREP78334 506 aa12.08□□□□□ -0.47
NEK3-205ENST00000610828 Q0VFX4 171 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms