RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, human

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRNP40-204	ENST00000474025	FN3KRP	Q9HA64	309 aa		4.27	□□□□□ -1.73
SNRNP40-204	ENST00000474025	ELOVL3	Q9HB03	270 aa		4.27	□□□□□ -1.73
SNRNP40-204	ENST00000474025	TMEM165	Q9HC07	324 aa		4.27	□□□□□ -1.73
SNRNP40-204	ENST00000474025	TCF7L1	Q9HCS4	588 aa		4.27	□□□□□ -1.73
SNRNP40-204	ENST00000474025	SSU72	Q9NP77	194 aa	Known RBP	4.27	□□□□□ -1.73
SNRNP40-204	ENST00000474025	MEPE	Q9NQ76	525 aa	Predicted RBP	4.27	□□□□□ -1.73
SNRNP40-204	ENST00000474025	MAN2C1	Q9NTJ4	1040 aa		4.27	□□□□□ -1.73
SNRNP40-204	ENST00000474025	SLAMF8	Q9P0V8	285 aa		4.27	□□□□□ -1.73
SNRNP40-204	ENST00000474025	MIOX	Q9UGB7	285 aa		4.27	□□□□□ -1.73
SNRNP40-204	ENST00000474025	IL19	Q9UHD0	177 aa		4.27	□□□□□ -1.73
SNRNP40-204	ENST00000474025	SLC13A4	Q9UKG4	626 aa		4.27	□□□□□ -1.73
SNRNP40-204	ENST00000474025	GMEB1	Q9Y692	573 aa		4.27	□□□□□ -1.73
SNRNP40-204	ENST00000474025	EPPK1	P58107	5090 aa	Known RBP	4.27	□□□□□ -1.73
SNRNP40-204	ENST00000474025	LYST	Q99698	3801 aa		4.27	□□□□□ -1.73
SNRNP40-204	ENST00000474025	DOCK11	Q5JSL3	2073 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	TRBV5-3	A0A0A0MS03	114 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	TRAPPC13	A5PLN9	417 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	C5orf63	A6NC05	138 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	NPIPB13	A6NJU9	1138 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	CPSF4L	A6NMK7	179 aa	Known RBP	4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	C22orf46	C9J442	243 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	NPIPB4	C9JG80	1138 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025		H0YL77	283 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	IFNL4	K9M1U5	179 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	PHYH	O14832	338 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	TNFRSF13B	O14836	293 aa	Predicted RBP	4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	UBD	O15205	165 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	SURF4	O15260	269 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	GPR137B	O60478	399 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	SNN	O75324	88 aa	Predicted RBP	4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	PEX14	O75381	377 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	ERLIN1	O75477	346 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	SERPINB7	O75635	380 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	SASH3	O75995	380 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	FSTL3	O95633	263 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	ABHD16A	O95870	558 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	CYB5R3	P00387	301 aa	Predicted RBP	4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	IGHV4-59	P01825	116 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	HIST1H2AB	P04908	130 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	F13B	P05160	661 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	SFTPB	P07988	381 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	CST2	P09228	141 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	TSPAN19	P0C672	248 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	KIT	P10721	976 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	UMPS	P11172	480 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	MMP9	P14780	707 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	GSTM3	P21266	225 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	PPIB	P23284	216 aa	Known RBP	4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	SLC6A2	P23975	617 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	AQP2	P41181	271 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	PITPNB	P48739	271 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	ARHGDIA	P52565	204 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	VSNL1	P62760	191 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	CD47	Q08722	323 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	ENDOG	Q14249	297 aa	Known RBP	4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	SGCA	Q16586	387 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	DUSP7	Q16829	419 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	ZNF404	Q494X3	552 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	ENTPD8	Q5MY95	495 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	WDR25	Q64LD2	544 aa	Predicted RBP	4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	TTC33	Q6PID6	262 aa	Predicted RBP	4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	SLC25A47	Q6Q0C1	308 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	ZNF841	Q6ZN19	808 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	FOXL2NB	Q6ZUU3	175 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	HIST3H2A	Q7L7L0	130 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	NLRC3	Q7RTR2	1065 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	RBM45	Q8IUH3	476 aa	Known RBP	4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	NPEPL1	Q8NDH3	523 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	OR10AD1	Q8NGE0	317 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	OR8B3	Q8NGG8	313 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	MOSPD2	Q8NHP6	518 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	ZNF420	Q8TAQ5	688 aa	Predicted RBP	4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	HDAC2	Q92769	488 aa	Known RBP	4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	HIST1H2AC	Q93077	130 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	HAVCR1	Q96D42	359 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	MPP4	Q96JB8	637 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	EAF1	Q96JC9	268 aa	Predicted RBP	4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	MEGF10	Q96KG7	1140 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	OR8B2	Q96RD0	313 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	PRSS27	Q9BQR3	290 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	KRTAP9-2	Q9BYQ4	174 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	PCDHAC1	Q9H158	963 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	INIP	Q9NRY2	104 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	TBCCD1	Q9NVR7	557 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	VAPA	Q9P0L0	249 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	STX18	Q9P2W9	335 aa	Known RBP	4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	CLN8	Q9UBY8	286 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	NDRG4	Q9ULP0	352 aa	Known RBP	4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	SLC7A7	Q9UM01	511 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	TIMM10B	Q9Y5J6	103 aa		4.26	□□□□□ -1.73
SNRNP40-204	ENST00000474025	CENPVL3	A0A0U1RRI6	287 aa		4.25	□□□□□ -1.73
SNRNP40-204	ENST00000474025	GMNC	A6NCL1	334 aa		4.25	□□□□□ -1.73
SNRNP40-204	ENST00000474025	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.25	□□□□□ -1.73
SNRNP40-204	ENST00000474025	P2RY10	O00398	339 aa		4.25	□□□□□ -1.73
SNRNP40-204	ENST00000474025	RGS16	O15492	202 aa	Predicted RBP	4.25	□□□□□ -1.73
SNRNP40-204	ENST00000474025	ENSA	O43768	121 aa	Known RBP	4.25	□□□□□ -1.73
SNRNP40-204	ENST00000474025	SHOX2	O60902	331 aa	Predicted RBP	4.25	□□□□□ -1.73
SNRNP40-204	ENST00000474025	OR7A10	O76100	309 aa		4.25	□□□□□ -1.73
SNRNP40-204	ENST00000474025	IGF2	P01344	180 aa		4.25	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms