RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 TAAR9Q96RI9 348 aa12.08□□□□□ -0.48
COL1A1-201ENST00000225964 LAT2Q9GZY6 243 aa12.08□□□□□ -0.48
COL1A1-201ENST00000225964 FAM90A27PA6NNH2 459 aa12.07□□□□□ -0.48
COL1A1-201ENST00000225964 ZNF701M0R085 212 aaPredicted RBP12.07□□□□□ -0.48
COL1A1-201ENST00000225964 CCSO14618 274 aa12.07□□□□□ -0.48
COL1A1-201ENST00000225964 ZNF195O14628 629 aa12.07□□□□□ -0.48
COL1A1-201ENST00000225964 DFFBO76075 338 aa12.07□□□□□ -0.48
COL1A1-201ENST00000225964 ST6GAL1P15907 406 aa12.07□□□□□ -0.48
COL1A1-201ENST00000225964 TEAD1P28347 426 aa12.07□□□□□ -0.48
COL1A1-201ENST00000225964 MOB3BQ86TA1 216 aa12.07□□□□□ -0.48
COL1A1-201ENST00000225964 ZDHHC23Q8IYP9 409 aa12.07□□□□□ -0.48
COL1A1-201ENST00000225964 LSMEM2Q8N112 164 aa12.07□□□□□ -0.48
COL1A1-201ENST00000225964 GABRG1Q8N1C3 465 aa12.07□□□□□ -0.48
COL1A1-201ENST00000225964 OR1M1Q8NGA1 313 aa12.07□□□□□ -0.48
COL1A1-201ENST00000225964 APH1BQ8WW43 257 aa12.07□□□□□ -0.48
COL1A1-201ENST00000225964 ST8SIA4Q92187 359 aa12.07□□□□□ -0.48
COL1A1-201ENST00000225964 SMLR1H3BR10 107 aa12.07□□□□□ -0.48
COL1A1-201ENST00000225964 POU2F2P09086 479 aa12.07□□□□□ -0.48
COL1A1-201ENST00000225964 MNX1P50219 401 aaPredicted RBP12.07□□□□□ -0.48
COL1A1-201ENST00000225964 PHYHD1Q5SRE7 291 aa12.07□□□□□ -0.48
COL1A1-201ENST00000225964 RBM45Q8IUH3 476 aaKnown RBP12.07□□□□□ -0.48
COL1A1-201ENST00000225964 FBXO17Q96EF6 278 aa12.07□□□□□ -0.48
COL1A1-201ENST00000225964 OXGR1Q96P68 337 aa12.07□□□□□ -0.48
COL1A1-201ENST00000225964 ZNF331Q9NQX6 463 aaPredicted RBP12.07□□□□□ -0.48
COL1A1-201ENST00000225964 LOC107986453A0A1B0GWG9 222 aa12.07□□□□□ -0.48
COL1A1-201ENST00000225964 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.07□□□□□ -0.48
COL1A1-201ENST00000225964 H0YIG0 161 aa12.07□□□□□ -0.48
COL1A1-201ENST00000225964 SSSCA1O60232 199 aa12.07□□□□□ -0.48
COL1A1-201ENST00000225964 S1PR3Q99500 378 aa12.07□□□□□ -0.48
COL1A1-201ENST00000225964 ASH2LQ9UBL3 628 aa12.07□□□□□ -0.48
COL1A1-201ENST00000225964 SOX18P35713 384 aa12.07□□□□□ -0.48
COL1A1-201ENST00000225964 HTR4Q13639 388 aa12.07□□□□□ -0.48
COL1A1-201ENST00000225964 TAF9Q16594 264 aa12.07□□□□□ -0.48
COL1A1-201ENST00000225964 CGB2Q6NT52 195 aa12.07□□□□□ -0.48
COL1A1-201ENST00000225964 B3GNT9Q6UX72 402 aa12.07□□□□□ -0.48
COL1A1-201ENST00000225964 RDH5Q92781 318 aa12.07□□□□□ -0.48
COL1A1-201ENST00000225964 ZNF2Q9BSG1 426 aaPredicted RBP12.07□□□□□ -0.48
COL1A1-201ENST00000225964 KRBOX1C9JBD0 128 aa12.07□□□□□ -0.48
COL1A1-201ENST00000225964 M0R135 149 aa12.07□□□□□ -0.48
COL1A1-201ENST00000225964 DTYMKP23919 212 aa12.07□□□□□ -0.48
COL1A1-201ENST00000225964 CLN3Q13286 438 aa12.07□□□□□ -0.48
COL1A1-201ENST00000225964 OR5I1Q13606 314 aa12.07□□□□□ -0.48
COL1A1-201ENST00000225964 SPANXN5Q5MJ07 72 aa12.07□□□□□ -0.48
COL1A1-201ENST00000225964 FAM58AQ8N1B3 248 aa12.07□□□□□ -0.48
COL1A1-201ENST00000225964 CLDN22Q8N7P3 220 aa12.07□□□□□ -0.48
COL1A1-201ENST00000225964 RPL3LQ92901 407 aaKnown RBP12.07□□□□□ -0.48
COL1A1-201ENST00000225964 ZNF799Q96GE5 643 aa12.07□□□□□ -0.48
COL1A1-201ENST00000225964 V9GYS6 101 aa12.07□□□□□ -0.48
COL1A1-201ENST00000225964 FGF17O60258 216 aa12.06□□□□□ -0.48
COL1A1-201ENST00000225964 HOXD12P35452 270 aa12.06□□□□□ -0.48
COL1A1-201ENST00000225964 OPALINQ96PE5 141 aa12.06□□□□□ -0.48
COL1A1-201ENST00000225964 UBQLN3Q9H347 655 aa12.06□□□□□ -0.48
COL1A1-201ENST00000225964 R3HDMLQ9H3Y0 253 aa12.06□□□□□ -0.48
COL1A1-201ENST00000225964 TAF9BQ9HBM6 251 aa12.06□□□□□ -0.48
COL1A1-201ENST00000225964 A0A1W2PR48 441 aa12.06□□□□□ -0.48
COL1A1-201ENST00000225964 CD22P20273 847 aa12.06□□□□□ -0.48
COL1A1-201ENST00000225964 FABP6P51161 128 aa12.06□□□□□ -0.48
COL1A1-201ENST00000225964 OR10K2Q6IF99 312 aa12.06□□□□□ -0.48
COL1A1-201ENST00000225964 PLPP6Q8IY26 295 aa12.06□□□□□ -0.48
COL1A1-201ENST00000225964 OR8U1Q8NH10 309 aa12.06□□□□□ -0.48
COL1A1-201ENST00000225964 SFT2D1Q8WV19 159 aa12.06□□□□□ -0.48
COL1A1-201ENST00000225964 RNF141Q8WVD5 230 aa12.06□□□□□ -0.48
COL1A1-201ENST00000225964 PSD2Q9BQI7 771 aa12.06□□□□□ -0.48
COL1A1-201ENST00000225964 PARP12Q9H0J9 701 aaKnown RBP12.06□□□□□ -0.48
COL1A1-201ENST00000225964 GAB2Q9UQC2 676 aa12.06□□□□□ -0.48
COL1A1-201ENST00000225964 GOLT1BQ9Y3E0 138 aa12.06□□□□□ -0.48
COL1A1-201ENST00000225964 TIMM9Q9Y5J7 89 aa12.06□□□□□ -0.48
COL1A1-201ENST00000225964 NKX2-1P43699 371 aaPredicted RBP12.06□□□□□ -0.48
COL1A1-201ENST00000225964 NOVP48745 357 aa12.06□□□□□ -0.48
COL1A1-201ENST00000225964 SPATA46Q5T0L3 261 aa12.06□□□□□ -0.48
COL1A1-201ENST00000225964 FAM122CQ6P4D5 195 aa12.06□□□□□ -0.48
COL1A1-201ENST00000225964 ANKRD33Q7Z3H0 272 aa12.06□□□□□ -0.48
COL1A1-201ENST00000225964 CAMKMTQ7Z624 323 aa12.06□□□□□ -0.48
COL1A1-201ENST00000225964 PXT1Q8NFP0 134 aa12.06□□□□□ -0.48
COL1A1-201ENST00000225964 OR5M11Q96RB7 305 aa12.06□□□□□ -0.48
COL1A1-201ENST00000225964 SLCO5A1Q9H2Y9 848 aa12.06□□□□□ -0.48
COL1A1-201ENST00000225964 MED9Q9NWA0 146 aa12.06□□□□□ -0.48
COL1A1-201ENST00000225964 UBL3O95164 117 aa12.06□□□□□ -0.48
COL1A1-201ENST00000225964 CTXN2P0C2S0 81 aa12.06□□□□□ -0.48
COL1A1-201ENST00000225964 EMDP50402 254 aa12.06□□□□□ -0.48
COL1A1-201ENST00000225964 OR10A3P58181 314 aa12.06□□□□□ -0.48
COL1A1-201ENST00000225964 ZNF85Q03923 595 aa12.06□□□□□ -0.48
COL1A1-201ENST00000225964 CMPK2Q5EBM0 449 aa12.06□□□□□ -0.48
COL1A1-201ENST00000225964 LYPD8Q6UX82 237 aa12.06□□□□□ -0.48
COL1A1-201ENST00000225964 CMTM4Q8IZR5 234 aa12.06□□□□□ -0.48
COL1A1-201ENST00000225964 OR2AK2Q8NG84 335 aa12.06□□□□□ -0.48
COL1A1-201ENST00000225964 SLC39A7Q92504 469 aa12.06□□□□□ -0.48
COL1A1-201ENST00000225964 NIPSNAP3BQ9BS92 247 aa12.06□□□□□ -0.48
COL1A1-201ENST00000225964 CLEC2DQ9UHP7 191 aa12.06□□□□□ -0.48
COL1A1-201ENST00000225964 FAM221AA4D161 298 aa12.06□□□□□ -0.48
COL1A1-201ENST00000225964 PMS2P2O95744 297 aa12.06□□□□□ -0.48
COL1A1-201ENST00000225964 IAPPP10997 89 aa12.06□□□□□ -0.48
COL1A1-201ENST00000225964 YIPF5Q969M3 257 aa12.06□□□□□ -0.48
COL1A1-201ENST00000225964 CMTM3Q96MX0 182 aa12.06□□□□□ -0.48
COL1A1-201ENST00000225964 SDF2Q99470 211 aa12.06□□□□□ -0.48
COL1A1-201ENST00000225964 MRPL22Q9NWU5 206 aaKnown RBP12.06□□□□□ -0.48
COL1A1-201ENST00000225964 NUMA1Q14980 2115 aa12.05□□□□□ -0.48
COL1A1-201ENST00000225964 VAMP5O95183 116 aa12.05□□□□□ -0.48
COL1A1-201ENST00000225964 GOSR1O95249 250 aa12.05□□□□□ -0.48
COL1A1-201ENST00000225964 CRYABP02511 175 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms