RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 CTAG2O75638 210 aa13.31□□□□□ -0.28
VPS36-207ENST00000611132 THEGLP0DJG4 465 aa13.31□□□□□ -0.28
VPS36-207ENST00000611132 PTAFRP25105 342 aa13.31□□□□□ -0.28
VPS36-207ENST00000611132 ZP2Q05996 745 aa13.31□□□□□ -0.28
VPS36-207ENST00000611132 SMAD2Q15796 467 aaKnown RBP13.31□□□□□ -0.28
VPS36-207ENST00000611132 TMEM156Q8N614 296 aa13.31□□□□□ -0.28
VPS36-207ENST00000611132 TSTD1Q8NFU3 115 aa13.31□□□□□ -0.28
VPS36-207ENST00000611132 OR4D10Q8NGI6 311 aa13.31□□□□□ -0.28
VPS36-207ENST00000611132 OR5D18Q8NGL1 313 aa13.31□□□□□ -0.28
VPS36-207ENST00000611132 NMNAT2Q9BZQ4 307 aa13.31□□□□□ -0.28
VPS36-207ENST00000611132 OR10A2Q9H208 303 aa13.31□□□□□ -0.28
VPS36-207ENST00000611132 THAP10Q9P2Z0 257 aaPredicted RBP13.31□□□□□ -0.28
VPS36-207ENST00000611132 GPR160Q9UJ42 338 aa13.31□□□□□ -0.28
VPS36-207ENST00000611132 B3GALT5Q9Y2C3 310 aa13.31□□□□□ -0.28
VPS36-207ENST00000611132 SMCO3A2RU48 225 aa13.3□□□□□ -0.28
VPS36-207ENST00000611132 MT-ATP6P00846 226 aa13.3□□□□□ -0.28
VPS36-207ENST00000611132 OR13C7P0DN81 318 aa13.3□□□□□ -0.28
VPS36-207ENST00000611132 ALOX5APP20292 161 aa13.3□□□□□ -0.28
VPS36-207ENST00000611132 METAP1P53582 386 aa13.3□□□□□ -0.28
VPS36-207ENST00000611132 PJVKQ0ZLH3 352 aa13.3□□□□□ -0.28
VPS36-207ENST00000611132 ZXDCQ2QGD7 858 aaPredicted RBP13.3□□□□□ -0.28
VPS36-207ENST00000611132 PRSS35Q8N3Z0 413 aa13.3□□□□□ -0.28
VPS36-207ENST00000611132 TERB2Q8NHR7 220 aa13.3□□□□□ -0.28
VPS36-207ENST00000611132 SLC17A5Q9NRA2 495 aa13.3□□□□□ -0.28
VPS36-207ENST00000611132 TMEM218A2RU14 115 aa13.3□□□□□ -0.28
VPS36-207ENST00000611132 DCTN6O00399 190 aa13.3□□□□□ -0.28
VPS36-207ENST00000611132 TP53I11O14683 189 aa13.3□□□□□ -0.28
VPS36-207ENST00000611132 IGF2P01344 180 aa13.3□□□□□ -0.28
VPS36-207ENST00000611132 CCNOP22674 350 aa13.3□□□□□ -0.28
VPS36-207ENST00000611132 ATP1B3P54709 279 aa13.3□□□□□ -0.28
VPS36-207ENST00000611132 C5orf46Q6UWT4 87 aa13.3□□□□□ -0.28
VPS36-207ENST00000611132 HIST2H3AQ71DI3 136 aa13.3□□□□□ -0.28
VPS36-207ENST00000611132 COMTD1Q86VU5 262 aa13.3□□□□□ -0.28
VPS36-207ENST00000611132 LINC01555Q8NAE3 123 aa13.3□□□□□ -0.28
VPS36-207ENST00000611132 RNF128Q8TEB7 428 aa13.3□□□□□ -0.28
VPS36-207ENST00000611132 LCORQ96JN0 433 aaPredicted RBP13.3□□□□□ -0.28
VPS36-207ENST00000611132 ENKD1Q9H0I2 346 aa13.3□□□□□ -0.28
VPS36-207ENST00000611132 ZMAT5Q9UDW3 170 aaKnown RBP13.3□□□□□ -0.28
VPS36-207ENST00000611132 CPED1A4D0V7 1026 aa13.3□□□□□ -0.28
VPS36-207ENST00000611132 OR6C68A6NDL8 312 aa13.3□□□□□ -0.28
VPS36-207ENST00000611132 OR5K3A6NET4 321 aa13.3□□□□□ -0.28
VPS36-207ENST00000611132 SEMA4FO95754 770 aa13.3□□□□□ -0.28
VPS36-207ENST00000611132 ANKRD34CP0C6C1 535 aa13.3□□□□□ -0.28
VPS36-207ENST00000611132 SNRPEP62304 92 aaKnown RBP13.3□□□□□ -0.28
VPS36-207ENST00000611132 FAM78AQ5JUQ0 283 aa13.3□□□□□ -0.28
VPS36-207ENST00000611132 FAM57BQ71RH2 274 aa13.3□□□□□ -0.28
VPS36-207ENST00000611132 MARCH3Q86UD3 253 aa13.3□□□□□ -0.28
VPS36-207ENST00000611132 CCDC54Q8NEL0 328 aa13.3□□□□□ -0.28
VPS36-207ENST00000611132 LFNGQ8NES3 379 aa13.3□□□□□ -0.28
VPS36-207ENST00000611132 OR4S1Q8NGB4 309 aa13.3□□□□□ -0.28
VPS36-207ENST00000611132 OR5L2Q8NGL0 311 aa13.3□□□□□ -0.28
VPS36-207ENST00000611132 OR51Q1Q8NH59 317 aa13.3□□□□□ -0.28
VPS36-207ENST00000611132 FAM3CQ92520 227 aa13.3□□□□□ -0.28
VPS36-207ENST00000611132 ZNF75AQ96N20 296 aa13.3□□□□□ -0.28
VPS36-207ENST00000611132 CMSS1Q9BQ75 279 aaKnown RBP13.3□□□□□ -0.28
VPS36-207ENST00000611132 NIPSNAP3BQ9BS92 247 aa13.3□□□□□ -0.28
VPS36-207ENST00000611132 NELFAQ9H3P2 528 aa13.3□□□□□ -0.28
VPS36-207ENST00000611132 UFSP2Q9NUQ7 469 aa13.3□□□□□ -0.28
VPS36-207ENST00000611132 C19orf25Q9UFG5 118 aaPredicted RBP13.3□□□□□ -0.28
VPS36-207ENST00000611132 UMAD1C9J7I0 102 aa13.3□□□□□ -0.28
VPS36-207ENST00000611132 MPC2O95563 127 aa13.3□□□□□ -0.28
VPS36-207ENST00000611132 FABP1P07148 127 aa13.3□□□□□ -0.28
VPS36-207ENST00000611132 CASRP41180 1078 aa13.3□□□□□ -0.28
VPS36-207ENST00000611132 SNU13P55769 128 aaKnown RBP13.3□□□□□ -0.28
VPS36-207ENST00000611132 SEZ6L2Q6UXD5 910 aa13.3□□□□□ -0.28
VPS36-207ENST00000611132 CHRDL2Q6WN34 429 aa13.3□□□□□ -0.28
VPS36-207ENST00000611132 EXD3Q8N9H8 876 aa13.3□□□□□ -0.28
VPS36-207ENST00000611132 SPTSSAQ969W0 71 aa13.3□□□□□ -0.28
VPS36-207ENST00000611132 THSD7AQ9UPZ6 1657 aa13.3□□□□□ -0.28
VPS36-207ENST00000611132 RNASEK-C17orf49H0YIS7 233 aa13.29□□□□□ -0.28
VPS36-207ENST00000611132 NME2P1O60361 137 aa13.29□□□□□ -0.28
VPS36-207ENST00000611132 IGHG1P01857 330 aa13.29□□□□□ -0.28
VPS36-207ENST00000611132 TAGLN2P37802 199 aaKnown RBP13.29□□□□□ -0.28
VPS36-207ENST00000611132 ACKR1Q16570 336 aa13.29□□□□□ -0.28
VPS36-207ENST00000611132 SGCBQ16585 318 aa13.29□□□□□ -0.28
VPS36-207ENST00000611132 EXOSC6Q5RKV6 272 aaKnown RBP13.29□□□□□ -0.28
VPS36-207ENST00000611132 RRNAD1Q96FB5 475 aaKnown RBP13.29□□□□□ -0.28
VPS36-207ENST00000611132 RBM24Q9BX46 236 aaKnown RBP13.29□□□□□ -0.28
VPS36-207ENST00000611132 DEFB126Q9BYW3 111 aa13.29□□□□□ -0.28
VPS36-207ENST00000611132 C6orf106Q9H6K1 298 aaPredicted RBP13.29□□□□□ -0.28
VPS36-207ENST00000611132 MMP26Q9NRE1 261 aa13.29□□□□□ -0.28
VPS36-207ENST00000611132 GDE1Q9NZC3 331 aa13.29□□□□□ -0.28
VPS36-207ENST00000611132 A8MVM7 634 aa13.29□□□□□ -0.28
VPS36-207ENST00000611132 ZNF354AO60765 605 aaPredicted RBP13.29□□□□□ -0.28
VPS36-207ENST00000611132 HOXB9P17482 250 aaPredicted RBP13.29□□□□□ -0.28
VPS36-207ENST00000611132 PI3P19957 117 aa13.29□□□□□ -0.28
VPS36-207ENST00000611132 OR1D4P47884 311 aa13.29□□□□□ -0.28
VPS36-207ENST00000611132 CST9Q5W186 159 aa13.29□□□□□ -0.28
VPS36-207ENST00000611132 CMTM1Q8IZ96 169 aa13.29□□□□□ -0.28
VPS36-207ENST00000611132 NUDT22Q9BRQ3 303 aa13.29□□□□□ -0.28
VPS36-207ENST00000611132 A0A087WUJ7 227 aa13.29□□□□□ -0.28
VPS36-207ENST00000611132 OR2C1O95371 312 aa13.29□□□□□ -0.28
VPS36-207ENST00000611132 ITGB2P05107 769 aa13.29□□□□□ -0.28
VPS36-207ENST00000611132 OMGP23515 440 aa13.29□□□□□ -0.28
VPS36-207ENST00000611132 FCGR2CP31995 323 aa13.29□□□□□ -0.28
VPS36-207ENST00000611132 SFTPDP35247 375 aa13.29□□□□□ -0.28
VPS36-207ENST00000611132 ETFDHQ16134 617 aa13.29□□□□□ -0.28
VPS36-207ENST00000611132 LILRB2Q8N423 598 aa13.29□□□□□ -0.28
VPS36-207ENST00000611132 PLPP5Q8NEB5 264 aa13.29□□□□□ -0.28
VPS36-207ENST00000611132 OR5M8Q8NGP6 311 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms