RNA–Protein interactions for RNA: ENST00000538485.6

EFCAB11-202, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2 BASIC

Gene EFCAB11, Length 1,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-202ENST00000538485 GUSBP1Q15486 140 aa17.16■□□□□ 0.34
EFCAB11-202ENST00000538485 TIMM50Q3ZCQ8 353 aa17.16■□□□□ 0.34
EFCAB11-202ENST00000538485 CCDC58Q4VC31 144 aa17.16■□□□□ 0.34
EFCAB11-202ENST00000538485 ZNF100Q8IYN0 542 aa17.16■□□□□ 0.34
EFCAB11-202ENST00000538485 OR10S1Q8NGN2 331 aa17.16■□□□□ 0.34
EFCAB11-202ENST00000538485 RNF133Q8WVZ7 376 aa17.16■□□□□ 0.34
EFCAB11-202ENST00000538485 PGLYRP3Q96LB9 341 aa17.16■□□□□ 0.34
EFCAB11-202ENST00000538485 FOXB1Q99853 325 aa17.16■□□□□ 0.34
EFCAB11-202ENST00000538485 C1orf198Q9H425 327 aa17.16■□□□□ 0.34
EFCAB11-202ENST00000538485 SIAEQ9HAT2 523 aa17.16■□□□□ 0.34
EFCAB11-202ENST00000538485 ASF1BQ9NVP2 202 aa17.16■□□□□ 0.34
EFCAB11-202ENST00000538485 SMG1Q96Q15 3661 aaKnown RBP17.15■□□□□ 0.34
EFCAB11-202ENST00000538485 RER1O15258 196 aa17.15■□□□□ 0.34
EFCAB11-202ENST00000538485 B4GALT1P15291 398 aa17.15■□□□□ 0.34
EFCAB11-202ENST00000538485 SLC3A1Q07837 685 aa17.15■□□□□ 0.34
EFCAB11-202ENST00000538485 FAM27BQ5VT28 67 aa17.15■□□□□ 0.34
EFCAB11-202ENST00000538485 RTL6Q6ICC9 239 aa17.15■□□□□ 0.34
EFCAB11-202ENST00000538485 OR7E24Q6IFN5 339 aa17.15■□□□□ 0.34
EFCAB11-202ENST00000538485 RPL22L1Q6P5R6 122 aaKnown RBP17.15■□□□□ 0.34
EFCAB11-202ENST00000538485 FAM214BQ7L5A3 538 aa17.15■□□□□ 0.34
EFCAB11-202ENST00000538485 CD163Q86VB7 1156 aa17.15■□□□□ 0.34
EFCAB11-202ENST00000538485 OR2AJ1Q8NGZ0 328 aa17.15■□□□□ 0.34
EFCAB11-202ENST00000538485 SLAMF6Q96DU3 332 aa17.15■□□□□ 0.34
EFCAB11-202ENST00000538485 SMIM19Q96E16 107 aa17.15■□□□□ 0.34
EFCAB11-202ENST00000538485 DCLRE1CQ96SD1 692 aaKnown RBP17.15■□□□□ 0.34
EFCAB11-202ENST00000538485 DCUN1D5Q9BTE7 237 aa17.15■□□□□ 0.34
EFCAB11-202ENST00000538485 LRP12Q9Y561 859 aa17.15■□□□□ 0.34
EFCAB11-202ENST00000538485 TRBV2A0A0J9YWF9 115 aa17.14■□□□□ 0.33
EFCAB11-202ENST00000538485 CD8B2A6NJW9 211 aa17.14■□□□□ 0.33
EFCAB11-202ENST00000538485 RPL36A-HNRNPH2H7BZ11 118 aa17.14■□□□□ 0.33
EFCAB11-202ENST00000538485 SLC22A1O15245 554 aa17.14■□□□□ 0.33
EFCAB11-202ENST00000538485 NPR2P20594 1047 aa17.14■□□□□ 0.33
EFCAB11-202ENST00000538485 TGM4P49221 684 aa17.14■□□□□ 0.33
EFCAB11-202ENST00000538485 FOXG1P55316 489 aaPredicted RBP17.14■□□□□ 0.33
EFCAB11-202ENST00000538485 FABP5Q01469 135 aa17.14■□□□□ 0.33
EFCAB11-202ENST00000538485 INSL4Q14641 139 aa17.14■□□□□ 0.33
EFCAB11-202ENST00000538485 CD200R1LQ6Q8B3 271 aa17.14■□□□□ 0.33
EFCAB11-202ENST00000538485 SEM1Q6ZVN7 128 aa17.14■□□□□ 0.33
EFCAB11-202ENST00000538485 UBE2J2Q8N2K1 259 aa17.14■□□□□ 0.33
EFCAB11-202ENST00000538485 NDNFQ8TB73 568 aa17.14■□□□□ 0.33
EFCAB11-202ENST00000538485 GHSRQ92847 366 aa17.14■□□□□ 0.33
EFCAB11-202ENST00000538485 EXOSC4Q9NPD3 245 aaKnown RBP17.14■□□□□ 0.33
EFCAB11-202ENST00000538485 CENPMQ9NSP4 180 aa17.14■□□□□ 0.33
EFCAB11-202ENST00000538485 UPB1Q9UBR1 384 aa17.14■□□□□ 0.33
EFCAB11-202ENST00000538485 PRSS50Q9UI38 385 aa17.14■□□□□ 0.33
EFCAB11-202ENST00000538485 FAM215AQ9Y5M1 114 aa17.14■□□□□ 0.33
EFCAB11-202ENST00000538485 RTTNQ86VV8 2226 aa17.14■□□□□ 0.33
EFCAB11-202ENST00000538485 WDR1O75083 606 aa17.14■□□□□ 0.33
EFCAB11-202ENST00000538485 GABRA1P14867 456 aa17.14■□□□□ 0.33
EFCAB11-202ENST00000538485 OPRL1P41146 370 aa17.14■□□□□ 0.33
EFCAB11-202ENST00000538485 NFATC3Q12968 1075 aa17.14■□□□□ 0.33
EFCAB11-202ENST00000538485 FAM57AQ8TBR7 257 aa17.14■□□□□ 0.33
EFCAB11-202ENST00000538485 FBXO17Q96EF6 278 aa17.14■□□□□ 0.33
EFCAB11-202ENST00000538485 SH3GL3Q99963 347 aa17.14■□□□□ 0.33
EFCAB11-202ENST00000538485 PDCD1LG2Q9BQ51 273 aa17.14■□□□□ 0.33
EFCAB11-202ENST00000538485 HDHD5Q9BXW7 423 aa17.14■□□□□ 0.33
EFCAB11-202ENST00000538485 FBXL3Q9UKT7 428 aa17.14■□□□□ 0.33
EFCAB11-202ENST00000538485 FIGNL2A6NMB9 653 aa17.13■□□□□ 0.33
EFCAB11-202ENST00000538485 ZNF587BE7ETH6 402 aa17.13■□□□□ 0.33
EFCAB11-202ENST00000538485 ZNF182P17025 639 aaPredicted RBP17.13■□□□□ 0.33
EFCAB11-202ENST00000538485 RIDAP52758 137 aaKnown RBP17.13■□□□□ 0.33
EFCAB11-202ENST00000538485 FAPQ12884 760 aa17.13■□□□□ 0.33
EFCAB11-202ENST00000538485 KLRB1Q12918 225 aa17.13■□□□□ 0.33
EFCAB11-202ENST00000538485 C9orf135Q5VTT2 229 aa17.13■□□□□ 0.33
EFCAB11-202ENST00000538485 DEGS2Q6QHC5 323 aa17.13■□□□□ 0.33
EFCAB11-202ENST00000538485 SLC22A24Q8N4F4 322 aa17.13■□□□□ 0.33
EFCAB11-202ENST00000538485 RPS4Y2Q8TD47 263 aa17.13■□□□□ 0.33
EFCAB11-202ENST00000538485 PNRC2Q9NPJ4 139 aaKnown RBP17.13■□□□□ 0.33
EFCAB11-202ENST00000538485 FRRS1LQ9P0K9 344 aa17.13■□□□□ 0.33
EFCAB11-202ENST00000538485 MALT1Q9UDY8 824 aa17.13■□□□□ 0.33
EFCAB11-202ENST00000538485 SSR3Q9UNL2 185 aa17.13■□□□□ 0.33
EFCAB11-202ENST00000538485 INTS1Q8N201 2190 aaKnown RBP17.12■□□□□ 0.33
EFCAB11-202ENST00000538485 MBD3L4A6NDZ8 208 aaPredicted RBP17.12■□□□□ 0.33
EFCAB11-202ENST00000538485 MBD3L3A6NE82 208 aaPredicted RBP17.12■□□□□ 0.33
EFCAB11-202ENST00000538485 MBD3L5A6NJ08 208 aaPredicted RBP17.12■□□□□ 0.33
EFCAB11-202ENST00000538485 HSPB2A8KAH6 182 aa17.12■□□□□ 0.33
EFCAB11-202ENST00000538485 PNPP00491 289 aa17.12■□□□□ 0.33
EFCAB11-202ENST00000538485 HLA-DPB1P04440 258 aa17.12■□□□□ 0.33
EFCAB11-202ENST00000538485 ABOP16442 354 aa17.12■□□□□ 0.33
EFCAB11-202ENST00000538485 KIR2DL2P43627 348 aaPredicted RBP17.12■□□□□ 0.33
EFCAB11-202ENST00000538485 OR3A2P47893 321 aa17.12■□□□□ 0.33
EFCAB11-202ENST00000538485 GDI2P50395 445 aaKnown RBP17.12■□□□□ 0.33
EFCAB11-202ENST00000538485 FOXF2Q12947 444 aa17.12■□□□□ 0.33
EFCAB11-202ENST00000538485 MRPL28Q13084 256 aaKnown RBP17.12■□□□□ 0.33
EFCAB11-202ENST00000538485 SF3B4Q15427 424 aaKnown RBP eCLIP17.12■□□□□ 0.33
EFCAB11-202ENST00000538485 HSPB2Q16082 182 aa17.12■□□□□ 0.33
EFCAB11-202ENST00000538485 FBXW9Q5XUX1 488 aa17.12■□□□□ 0.33
EFCAB11-202ENST00000538485 OR2A2Q6IF42 318 aa17.12■□□□□ 0.33
EFCAB11-202ENST00000538485 GDPGP1Q6ZNW5 385 aa17.12■□□□□ 0.33
EFCAB11-202ENST00000538485 RPRMLQ8N4K4 120 aa17.12■□□□□ 0.33
EFCAB11-202ENST00000538485 MBD3L2Q8NHZ7 208 aaPredicted RBP17.12■□□□□ 0.33
EFCAB11-202ENST00000538485 HAVCR2Q8TDQ0 301 aa17.12■□□□□ 0.33
EFCAB11-202ENST00000538485 TXNL4BQ9NX01 149 aaKnown RBP17.12■□□□□ 0.33
EFCAB11-202ENST00000538485 ZNF254O75437 659 aa17.12■□□□□ 0.33
EFCAB11-202ENST00000538485 TOXO94900 526 aa17.12■□□□□ 0.33
EFCAB11-202ENST00000538485 ZFPL1O95159 310 aa17.12■□□□□ 0.33
EFCAB11-202ENST00000538485 H2BFMP0C1H6 154 aa17.12■□□□□ 0.33
EFCAB11-202ENST00000538485 CD53P19397 219 aa17.12■□□□□ 0.33
EFCAB11-202ENST00000538485 ARF1P84077 181 aaKnown RBP17.12■□□□□ 0.33
EFCAB11-202ENST00000538485 ALKBH1Q13686 389 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms