RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 OR2T27Q8NH04 317 aa16.94■□□□□ 0.3
USP39-218ENST00000493829 LILRB4Q8NHJ6 448 aa16.94■□□□□ 0.3
USP39-218ENST00000493829 AKR7LQ8NHP1 331 aa16.94■□□□□ 0.3
USP39-218ENST00000493829 ITLN2Q8WWU7 325 aaPredicted RBP16.94■□□□□ 0.3
USP39-218ENST00000493829 ABHD6Q9BV23 337 aa16.94■□□□□ 0.3
USP39-218ENST00000493829 ALG8Q9BVK2 526 aa16.94■□□□□ 0.3
USP39-218ENST00000493829 ACTR6Q9GZN1 396 aa16.94■□□□□ 0.3
USP39-218ENST00000493829 ERVK13-1Q9NX77 482 aa16.94■□□□□ 0.3
USP39-218ENST00000493829 LIMS3P0CW19 117 aa16.93■□□□□ 0.3
USP39-218ENST00000493829 LIMS4P0CW20 117 aa16.93■□□□□ 0.3
USP39-218ENST00000493829 ALOX5APP20292 161 aa16.93■□□□□ 0.3
USP39-218ENST00000493829 SNTB1Q13884 538 aaKnown RBP16.93■□□□□ 0.3
USP39-218ENST00000493829 PCK2Q16822 640 aa16.93■□□□□ 0.3
USP39-218ENST00000493829 SLC36A2Q495M3 483 aa16.93■□□□□ 0.3
USP39-218ENST00000493829 TEX30Q5JUR7 227 aa16.93■□□□□ 0.3
USP39-218ENST00000493829 ZNF322Q6U7Q0 402 aaPredicted RBP16.93■□□□□ 0.3
USP39-218ENST00000493829 C1orf162Q8NEQ5 155 aaPredicted RBP16.93■□□□□ 0.3
USP39-218ENST00000493829 TSPAN14Q8NG11 270 aa16.93■□□□□ 0.3
USP39-218ENST00000493829 ST7LQ8TDW4 575 aa16.93■□□□□ 0.3
USP39-218ENST00000493829 SLC17A5Q9NRA2 495 aa16.93■□□□□ 0.3
USP39-218ENST00000493829 CENPMQ9NSP4 180 aa16.93■□□□□ 0.3
USP39-218ENST00000493829 ELOVL5Q9NYP7 299 aa16.93■□□□□ 0.3
USP39-218ENST00000493829 IKZF2Q9UKS7 526 aa16.93■□□□□ 0.3
USP39-218ENST00000493829 EXOSC1Q9Y3B2 195 aaKnown RBP16.93■□□□□ 0.3
USP39-218ENST00000493829 SNX5Q9Y5X3 404 aa16.93■□□□□ 0.3
USP39-218ENST00000493829 DOK2O60496 412 aa16.92■□□□□ 0.3
USP39-218ENST00000493829 AGFG2O95081 481 aa16.92■□□□□ 0.3
USP39-218ENST00000493829 PSMB1P20618 241 aaKnown RBP16.92■□□□□ 0.3
USP39-218ENST00000493829 GRNP28799 593 aaKnown RBP16.92■□□□□ 0.3
USP39-218ENST00000493829 UGT2B10P36537 528 aa16.92■□□□□ 0.3
USP39-218ENST00000493829 TP53I3Q53FA7 332 aa16.92■□□□□ 0.3
USP39-218ENST00000493829 OR2G6Q5TZ20 316 aa16.92■□□□□ 0.3
USP39-218ENST00000493829 OR7E24Q6IFN5 339 aa16.92■□□□□ 0.3
USP39-218ENST00000493829 ZNF774Q6NX45 483 aa16.92■□□□□ 0.3
USP39-218ENST00000493829 ZNF773Q6PK81 442 aa16.92■□□□□ 0.3
USP39-218ENST00000493829 LRRN1Q6UXK5 716 aa16.92■□□□□ 0.3
USP39-218ENST00000493829 PLEKHG7Q6ZR37 379 aa16.92■□□□□ 0.3
USP39-218ENST00000493829 PRSS48Q7RTY5 328 aa16.92■□□□□ 0.3
USP39-218ENST00000493829 MDP1Q86V88 176 aa16.92■□□□□ 0.3
USP39-218ENST00000493829 ZNF454Q8N9F8 522 aa16.92■□□□□ 0.3
USP39-218ENST00000493829 OR10S1Q8NGN2 331 aa16.92■□□□□ 0.3
USP39-218ENST00000493829 SNX33Q8WV41 574 aa16.92■□□□□ 0.3
USP39-218ENST00000493829 NANOS1Q8WY41 292 aaKnown RBP16.92■□□□□ 0.3
USP39-218ENST00000493829 SLAMF6Q96DU3 332 aa16.92■□□□□ 0.3
USP39-218ENST00000493829 C1QTNF6Q9BXI9 259 aa16.92■□□□□ 0.3
USP39-218ENST00000493829 OR2H1Q9GZK4 316 aa16.92■□□□□ 0.3
USP39-218ENST00000493829 C1orf198Q9H425 327 aa16.92■□□□□ 0.3
USP39-218ENST00000493829 CHCHD3Q9NX63 227 aaKnown RBP16.92■□□□□ 0.3
USP39-218ENST00000493829 PLEK2Q9NYT0 353 aa16.92■□□□□ 0.3
USP39-218ENST00000493829 TMEM14AQ9Y6G1 99 aa16.92■□□□□ 0.3
USP39-218ENST00000493829 MYL12BO14950 172 aa16.91■□□□□ 0.3
USP39-218ENST00000493829 MMP7P09237 267 aaPredicted RBP16.91■□□□□ 0.3
USP39-218ENST00000493829 PCBD1P61457 104 aa16.91■□□□□ 0.3
USP39-218ENST00000493829 SCRN3Q0VDG4 424 aa16.91■□□□□ 0.3
USP39-218ENST00000493829 PABPC1L2AQ5JQF8 200 aa16.91■□□□□ 0.3
USP39-218ENST00000493829 WDR31Q8NA23 367 aa16.91■□□□□ 0.3
USP39-218ENST00000493829 SIGLEC11Q96RL6 698 aa16.91■□□□□ 0.3
USP39-218ENST00000493829 KCNJ16Q9NPI9 418 aa16.91■□□□□ 0.3
USP39-218ENST00000493829 SLCO1C1Q9NYB5 712 aa16.91■□□□□ 0.3
USP39-218ENST00000493829 GNG8Q9UK08 70 aa16.91■□□□□ 0.3
USP39-218ENST00000493829 DIDO1Q9BTC0 2240 aaKnown RBP16.91■□□□□ 0.3
USP39-218ENST00000493829 OR5H1A6NKK0 313 aa16.91■□□□□ 0.3
USP39-218ENST00000493829 C16orf97H3BN30 126 aa16.91■□□□□ 0.3
USP39-218ENST00000493829 UBL3O95164 117 aa16.91■□□□□ 0.3
USP39-218ENST00000493829 PTHP01270 115 aa16.91■□□□□ 0.3
USP39-218ENST00000493829 SMIM18P0DKX4 95 aa16.91■□□□□ 0.3
USP39-218ENST00000493829 PSG4Q00888 419 aa16.91■□□□□ 0.3
USP39-218ENST00000493829 GSG1Q2KHT4 349 aa16.91■□□□□ 0.3
USP39-218ENST00000493829 CCDC92Q53HC0 331 aaPredicted RBP16.91■□□□□ 0.3
USP39-218ENST00000493829 KRT77Q7Z794 578 aa16.91■□□□□ 0.3
USP39-218ENST00000493829 SPARTQ8N0X7 666 aa16.91■□□□□ 0.3
USP39-218ENST00000493829 GJC3Q8NFK1 279 aa16.91■□□□□ 0.3
USP39-218ENST00000493829 C4orf36Q96KX1 117 aa16.91■□□□□ 0.3
USP39-218ENST00000493829 MNTQ99583 582 aa16.91■□□□□ 0.3
USP39-218ENST00000493829 ZNF649Q9BS31 505 aa16.91■□□□□ 0.3
USP39-218ENST00000493829 WNT5BQ9H1J7 359 aa16.91■□□□□ 0.3
USP39-218ENST00000493829 ISG20L2Q9H9L3 353 aaKnown RBP16.91■□□□□ 0.3
USP39-218ENST00000493829 INPP5EQ9NRR6 644 aa16.91■□□□□ 0.3
USP39-218ENST00000493829 TIMM10BQ9Y5J6 103 aa16.91■□□□□ 0.3
USP39-218ENST00000493829 MAGEA13PA6NCF6 341 aa16.9■□□□□ 0.3
USP39-218ENST00000493829 TRIM64A6NGJ6 449 aa16.9■□□□□ 0.3
USP39-218ENST00000493829 J3QLW9 94 aa16.9■□□□□ 0.3
USP39-218ENST00000493829 SGCEO43556 437 aa16.9■□□□□ 0.3
USP39-218ENST00000493829 ZNF19P17023 458 aa16.9■□□□□ 0.3
USP39-218ENST00000493829 RAB1AP62820 205 aa16.9■□□□□ 0.3
USP39-218ENST00000493829 GALEQ14376 348 aa16.9■□□□□ 0.3
USP39-218ENST00000493829 TMEM53Q6P2H8 277 aa16.9■□□□□ 0.3
USP39-218ENST00000493829 VASH1Q7L8A9 365 aaPredicted RBP16.9■□□□□ 0.3
USP39-218ENST00000493829 C17orf78Q8N4C9 275 aa16.9■□□□□ 0.3
USP39-218ENST00000493829 KLHL36Q8N4N3 616 aa16.9■□□□□ 0.3
USP39-218ENST00000493829 STEAP2Q8NFT2 490 aa16.9■□□□□ 0.3
USP39-218ENST00000493829 SLC7A6Q92536 515 aa16.9■□□□□ 0.3
USP39-218ENST00000493829 ZC3HAV1LQ96H79 300 aaKnown RBP16.9■□□□□ 0.3
USP39-218ENST00000493829 JAM3Q9BX67 310 aa16.9■□□□□ 0.3
USP39-218ENST00000493829 CDCA4Q9BXL8 241 aa16.9■□□□□ 0.3
USP39-218ENST00000493829 PNRC2Q9NPJ4 139 aaKnown RBP16.9■□□□□ 0.3
USP39-218ENST00000493829 ACOXLQ9NUZ1 547 aa16.9■□□□□ 0.3
USP39-218ENST00000493829 FBXL3Q9UKT7 428 aa16.9■□□□□ 0.3
USP39-218ENST00000493829 ERGIC3Q9Y282 383 aa16.9■□□□□ 0.3
USP39-218ENST00000493829 PHYHO14832 338 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms