RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 LINC01006Q8NI28 216 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 ITLN1Q8WWA0 313 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 RAB40AQ8WXH6 277 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 ASB10Q8WXI3 467 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 NMD3Q96D46 503 aaKnown RBP4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 OR2V2Q96R30 315 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 ZNF426Q9BUY5 554 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 SPATA5L1Q9BVQ7 753 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 ROPN1BQ9BZX4 212 aaPredicted RBP4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 OR2H1Q9GZK4 316 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 WNT5BQ9H1J7 359 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 POFUT1Q9H488 388 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 RAD21L1Q9H4I0 556 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 NANOGQ9H9S0 305 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 ROPN1Q9HAT0 212 aaPredicted RBP4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 SIAEQ9HAT2 523 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 SMURF2Q9HAU4 748 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 GCM1Q9NP62 436 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 CCNB1IP1Q9NPC3 277 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 NOX4Q9NPH5 578 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 SDR39U1Q9NRG7 319 aaPredicted RBP4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 SLC25A37Q9NYZ2 338 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 ASH2LQ9UBL3 628 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 ZNF229Q9UJW7 825 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 PPP1R3CQ9UQK1 317 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 RNF114Q9Y508 228 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 POMT1Q9Y6A1 747 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 RYR2Q92736 4967 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 KIR2DS1A0A191URI9 304 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 A0A1W2PRG6 482 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 TRPC5OSA6NMA1 111 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 MCIDASD6RGH6 385 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 G3V4G9 280 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 BLOC1S5-TXNDC5H3BN57 136 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 KPNA4O00629 521 aaPredicted RBP4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 TRMUO75648 421 aaKnown RBP4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 ZNF205O95201 554 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 ACADSP16219 412 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 KITLGP21583 273 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 CPT2P23786 658 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 LAP3P28838 519 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 ERFP50548 548 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 DAP3P51398 398 aaKnown RBP4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 UGT2B15P54855 530 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 PCBP3P57721 371 aaKnown RBP4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 BPIFB3P59826 476 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 FGF12P61328 243 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 GNB2P62879 340 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 FMODQ06828 376 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 RPL18Q07020 188 aaKnown RBP4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 SCARB2Q14108 478 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 MPP2Q14168 576 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 TAF11Q15544 211 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 C2orf68Q2NKX9 166 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 VAX1Q5SQQ9 334 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 ARMC4Q5T2S8 1044 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 LRIF1Q5T3J3 769 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 KPRPQ5T749 579 aaPredicted RBP4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 GPR157Q5UAW9 335 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 FAM27BQ5VT28 67 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 RUSC1-AS1Q66K80 236 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 NXNQ6DKJ4 435 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 SLC27A4Q6P1M0 643 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 SLC2A7Q6PXP3 512 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 ZNF620Q6ZNG0 422 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 MAVSQ7Z434 540 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 HDDC2Q7Z4H3 204 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 NANOGNBQ7Z5D8 188 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 ARMC8Q8IUR7 673 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 SMYD1Q8NB12 490 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 GPR32P1Q8NGA4 272 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 OR4D11Q8NGI4 311 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 OR6T1Q8NGN1 323 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 VANGL1Q8TAA9 524 aaPredicted RBP4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 FAM110DQ8TAY7 271 aaPredicted RBP4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 ADAMTS16Q8TE57 1224 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 C10orf82Q8WW14 230 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 SSMEM1Q8WWF3 244 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 DYRK2Q92630 601 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 NSMAFQ92636 917 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 NEIL1Q96FI4 390 aaPredicted RBP4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 THOC1Q96FV9 657 aaKnown RBP4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 PLEKHA8Q96JA3 519 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 MAELQ96JY0 434 aaKnown RBP4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 FAM71F1Q96KD3 344 aaPredicted RBP4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 C4orf45Q96LM5 186 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 OR52B2Q96RD2 323 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 ZNF607Q96SK3 696 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 MCHR1Q99705 422 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 SLC30A2Q9BRI3 323 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 NUDT16L1Q9BRJ7 211 aaKnown RBP4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 TMEM246Q9BRR3 403 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 TMEM109Q9BVC6 243 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 CDADC1Q9BWV3 514 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 KCNN2Q9H2S1 579 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 IKZF5Q9H5V7 419 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 TMEM38AQ9H6F2 299 aa4.27□□□□□ -1.73
SNRNP40-204ENST00000474025 EVA1AQ9H8M9 152 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms