RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 LHPPQ9H008 270 aa4.22□□□□□ -1.73
HMGB3P9-201ENST00000441799 TXNIPQ9H3M7 391 aa4.22□□□□□ -1.73
HMGB3P9-201ENST00000441799 PIGMQ9H3S5 423 aa4.22□□□□□ -1.73
HMGB3P9-201ENST00000441799 ISYNA1Q9NPH2 558 aa4.22□□□□□ -1.73
HMGB3P9-201ENST00000441799 ASAH2Q9NR71 780 aa4.22□□□□□ -1.73
HMGB3P9-201ENST00000441799 ALKBH4Q9NXW9 302 aa4.22□□□□□ -1.73
HMGB3P9-201ENST00000441799 PIPOXQ9P0Z9 390 aa4.22□□□□□ -1.73
HMGB3P9-201ENST00000441799 VPS29Q9UBQ0 182 aa4.22□□□□□ -1.73
HMGB3P9-201ENST00000441799 CD84Q9UIB8 345 aa4.22□□□□□ -1.73
HMGB3P9-201ENST00000441799 CD207Q9UJ71 328 aa4.22□□□□□ -1.73
HMGB3P9-201ENST00000441799 VPREB3Q9UKI3 123 aa4.22□□□□□ -1.73
HMGB3P9-201ENST00000441799 NDRG4Q9ULP0 352 aaKnown RBP4.22□□□□□ -1.73
HMGB3P9-201ENST00000441799 TFR2Q9UP52 801 aa4.22□□□□□ -1.73
HMGB3P9-201ENST00000441799 OSGIN2Q9Y236 505 aa4.22□□□□□ -1.73
HMGB3P9-201ENST00000441799 C5P01031 1676 aa4.22□□□□□ -1.73
HMGB3P9-201ENST00000441799 LAMB4A4D0S4 1761 aa4.22□□□□□ -1.73
HMGB3P9-201ENST00000441799 CUL9Q8IWT3 2517 aa4.22□□□□□ -1.73
HMGB3P9-201ENST00000441799 NFASCO94856 1347 aa4.21□□□□□ -1.73
HMGB3P9-201ENST00000441799 SNED1Q8TER0 1413 aa4.21□□□□□ -1.73
HMGB3P9-201ENST00000441799 TBC1D3DA0A087WVF3 549 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 A0A087WWV3 80 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 TBC1D3EA0A087X179 549 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 TMEM72A0PK05 275 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 C21orf140B9A014 251 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 TBC1D3LB9A6J9 549 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 GFYI3L273 518 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 AP4M1O00189 453 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 SLC17A3O00476 420 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 RNASET2O00584 256 aaKnown RBP4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 SDHDO14521 159 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 SLC31A1O15431 190 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 DHHO43323 396 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 SSNA1O43805 119 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 PDE6DO43924 150 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 TPST2O60704 377 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 MRPS14O60783 128 aaKnown RBP4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 CTSVO60911 334 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 ORM1P02763 201 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 ATP1A1P05023 1023 aaKnown RBP4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 ISG15P05161 165 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 CSF3P09919 207 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 C8orf88P0DMB2 117 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 T-ENOLP0DO92 83 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 RAP2AP10114 183 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 NR2F6P10588 404 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 ZNF35P13682 527 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 MMP9P14780 707 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 B4GALT1P15291 398 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 KITLGP21583 273 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 OMGP23515 440 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 GDF1P27539 372 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 CERS1P27544 350 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 FMO4P31512 558 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 GKP32189 559 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 CCKARP32238 428 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 AQP4P55087 323 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 OR2B8PP59922 312 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 HBA1P69905 142 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 ARHGAP1Q07960 439 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 CD47Q08722 323 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 FABP9Q0Z7S8 132 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 MGAT2Q10469 447 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 NFATC2Q13469 925 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 CRMP1Q14194 572 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 MRPL23Q16540 153 aaKnown RBP4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 ZNF585BQ52M93 769 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 LRRC73Q5JTD7 316 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 SAMD4BQ5PRF9 694 aaKnown RBP4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 METRNLQ641Q3 311 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 LAMTOR1Q6IAA8 161 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 OR2A2Q6IF42 318 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 TBC1D3CQ6IPX1 549 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 SIGLEC15Q6ZMC9 328 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 IL17RELQ6ZVW7 336 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 DOK3Q7L591 496 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 RNF130Q86XS8 419 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 APOBEC3FQ8IUX4 373 aaKnown RBP4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 LAX1Q8IWV1 398 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 TBC1D3Q8IZP1 549 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 PQLC1Q8N2U9 271 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 GALNT16Q8N428 558 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 LFNGQ8NES3 379 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 OR4E2Q8NGC2 313 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 OR4D9Q8NGE8 314 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 OR5M3Q8NGP4 307 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 OR1L4Q8NGR5 311 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 OR4Q3Q8NH05 313 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 OR1P1Q8NH06 330 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 RHOXF1Q8NHV9 184 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 WIPF2Q8TF74 440 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 ABHD5Q8WTS1 349 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 CCDC107Q8WV48 283 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 SKA2Q8WVK7 121 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 RORBQ92753 470 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 SCAMP4Q969E2 229 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 ISOC2Q96AB3 205 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 ROPN1LQ96C74 230 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 C8orf44Q96CB5 159 aa4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 MMABQ96EY8 250 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P9-201ENST00000441799 ZC3HAV1LQ96H79 300 aaKnown RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms